Project measure / variable:   Harrill2   serum_CREA_trt

ID, description, units MPD:44122   serum_CREA_trt   creatinine (serum CREA)   [mg/dL]  DB289  
DB289 study
Data set, strains Harrill2   inbred   34 strains     sex: f     age: 6-8wks
Procedure metabolic panel
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  STRAIN COMPARISON PLOT
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Harrill2 - creatinine (serum CREA) DB289



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested34 strains
Mean of the strain means0.352   mg/dL
Median of the strain means0.335   mg/dL
SD of the strain means± 0.1000
Coefficient of variation (CV)0.284
Min–max range of strain means0.144   –   0.716   mg/dL
Mean sample size per strain4.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 33 1.6404 0.0497 3.5112 < 0.0001
Residuals 131 1.8546 0.0142


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.276 0.0434   5 0.0194 0.157 0.22, 0.34 -0.76
A/J f 0.382 0.136   5 0.0608 0.356 0.15, 0.48 0.3
AKR/J f 0.284 0.0904   5 0.0404 0.318 0.13, 0.37 -0.68
BALB/cByJ f 0.384 0.0777   5 0.0347 0.202 0.29, 0.48 0.32
BTBR T+ Itpr3tf/J f 0.238 0.0217   5 0.0097 0.0911 0.21, 0.27 -1.14
BUB/BnJ f 0.334 0.0462   5 0.0206 0.138 0.27, 0.39 -0.18
C3H/HeJ f 0.288 0.054   5 0.0242 0.188 0.23, 0.37 -0.64
C57BL/6J f 0.336 0.0702   5 0.0314 0.209 0.25, 0.44 -0.16
C57BLKS/J f 0.345 0.0451   4 0.0225 0.131 0.31, 0.41 -0.07
C57BR/cdJ f 0.325 0.0532   4 0.0266 0.164 0.27, 0.38 -0.27
C58/J f 0.305 0.0493   4 0.0247 0.162 0.25, 0.36 -0.47
CBA/J f 0.292 0.0192   5 0.0086 0.0659 0.26, 0.31 -0.6
CE/J f 0.342 0.0432   5 0.0193 0.126 0.29, 0.4 -0.1
DBA/2J f 0.362 0.0642   5 0.0287 0.177 0.27, 0.44 0.1
FVB/NJ f 0.32 0.057   5 0.0255 0.178 0.24, 0.38 -0.32
I/LnJ f 0.44 0.0742   5 0.0332 0.169 0.37, 0.55 0.88
KK/HlJ f 0.356 0.0541   5 0.0242 0.152 0.29, 0.43 0.04
LG/J f 0.466 0.0462   5 0.0206 0.099 0.43, 0.54 1.14
LP/J f 0.28 0.0436   5 0.0195 0.156 0.21, 0.32 -0.72
MA/MyJ f 0.324 0.0462   5 0.0206 0.142 0.27, 0.37 -0.28
MRL/MpJ f 0.364 0.0219   5 0.0098 0.0602 0.35, 0.4 0.12
NOD/ShiLtJ f 0.408 0.263   5 0.118 0.646 0.18, 0.85 0.56
NON/ShiLtJ f 0.324 0.0503   5 0.0225 0.155 0.25, 0.38 -0.28
NOR/LtJ f 0.342 0.037   5 0.0166 0.108 0.29, 0.39 -0.1
NZW/LacJ f 0.316 0.0365   5 0.0163 0.115 0.26, 0.35 -0.36
P/J f 0.452 0.106   5 0.0476 0.235 0.32, 0.57 1.0
PL/J f 0.282 0.0538   4 0.0269 0.19 0.22, 0.35 -0.7
PWK/PhJ f 0.716 0.381   5 0.17 0.532 0.48, 1.38 3.64
RIIIS/J f 0.5 0.296   5 0.132 0.592 0.21, 0.97 1.48
SEA/GnJ f 0.532 0.206   5 0.0919 0.386 0.31, 0.87 1.8
SJL/J f 0.332 0.0492   5 0.022 0.148 0.25, 0.37 -0.2
SM/J f 0.232 0.0606   5 0.0271 0.261 0.14, 0.3 -1.2
SWR/J f 0.355 0.058   4 0.029 0.163 0.28, 0.42 0.03
WSB/EiJ f 0.144 0.13   5 0.058 0.901 -2.08


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.276 0.0532 0.3813 0.1707
A/J f 0.382 0.0532 0.4873 0.2767
AKR/J f 0.284 0.0532 0.3893 0.1787
BALB/cByJ f 0.384 0.0532 0.4893 0.2787
BTBR T+ Itpr3tf/J f 0.238 0.0532 0.3433 0.1327
BUB/BnJ f 0.334 0.0532 0.4393 0.2287
C3H/HeJ f 0.288 0.0532 0.3933 0.1827
C57BL/6J f 0.336 0.0532 0.4413 0.2307
C57BLKS/J f 0.345 0.0595 0.4627 0.2273
C57BR/cdJ f 0.325 0.0595 0.4427 0.2073
C58/J f 0.305 0.0595 0.4227 0.1873
CBA/J f 0.292 0.0532 0.3973 0.1867
CE/J f 0.342 0.0532 0.4473 0.2367
DBA/2J f 0.362 0.0532 0.4673 0.2567
FVB/NJ f 0.32 0.0532 0.4253 0.2147
I/LnJ f 0.44 0.0532 0.5453 0.3347
KK/HlJ f 0.356 0.0532 0.4613 0.2507
LG/J f 0.466 0.0532 0.5713 0.3607
LP/J f 0.28 0.0532 0.3853 0.1747
MA/MyJ f 0.324 0.0532 0.4293 0.2187
MRL/MpJ f 0.364 0.0532 0.4693 0.2587
NOD/ShiLtJ f 0.408 0.0532 0.5133 0.3027
NON/ShiLtJ f 0.324 0.0532 0.4293 0.2187
NOR/LtJ f 0.342 0.0532 0.4473 0.2367
NZW/LacJ f 0.316 0.0532 0.4213 0.2107
P/J f 0.452 0.0532 0.5573 0.3467
PL/J f 0.2825 0.0595 0.4002 0.1648
PWK/PhJ f 0.716 0.0532 0.8213 0.6107
RIIIS/J f 0.5 0.0532 0.6053 0.3947
SEA/GnJ f 0.532 0.0532 0.6373 0.4267
SJL/J f 0.332 0.0532 0.4373 0.2267
SM/J f 0.232 0.0532 0.3373 0.1267
SWR/J f 0.355 0.0595 0.4727 0.2373
WSB/EiJ f 0.144 0.0532 0.2493 0.0387




  GWAS USING LINEAR MIXED MODELS