Project measure / variable:   Harrill2   bw_start_trt

ID, description, units MPD:44102   bw_start_trt   body weight at start of testing   [g]  DB289  
DB289 study
Data set, strains Harrill2   inbred   34 strains     sex: f     age: 6-8wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Harrill2 - body weight at start of testing DB289



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested34 strains
Mean of the strain means20.4   g
Median of the strain means19.6   g
SD of the strain means± 4.21
Coefficient of variation (CV)0.207
Min–max range of strain means12.8   –   33.9   g
Mean sample size per strain5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 33 2929.7655 88.7808 59.3198 < 0.0001
Residuals 136 203.544 1.4966


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 20.2 1.56   5 0.698 0.0771 18.4, 22.7 -0.05
A/J f 19.8 1.06   5 0.476 0.0538 18.8, 21.5 -0.14
AKR/J f 23.1 2.25   5 1.01 0.0974 19.6, 25.3 0.64
BALB/cByJ f 20.1 0.676   5 0.302 0.0337 19.5, 21.2 -0.07
BTBR T+ Itpr3tf/J f 24.7 0.928   5 0.415 0.0376 23.7, 25.7 1.02
BUB/BnJ f 20.4 1.72   5 0.768 0.0843 18.1, 22.7 0.0
C3H/HeJ f 19.5 1.83   5 0.817 0.0938 17.4, 21.5 -0.21
C57BL/6J f 19.0 0.823   5 0.368 0.0433 17.8, 20.1 -0.33
C57BLKS/J f 19.6 0.658   5 0.294 0.0335 18.9, 20.7 -0.19
C57BR/cdJ f 18.8 1.2   5 0.538 0.0641 17.5, 20.3 -0.38
C58/J f 19.5 0.723   5 0.323 0.0372 18.9, 20.7 -0.21
CBA/J f 21.1 0.831   5 0.371 0.0394 20.0, 22.3 0.17
CE/J f 18.0 0.858   5 0.384 0.0477 17.2, 19.1 -0.57
DBA/2J f 19.5 0.86   5 0.385 0.0441 18.2, 20.5 -0.21
FVB/NJ f 22.1 0.979   5 0.438 0.0444 21.0, 23.6 0.4
I/LnJ f 17.3 1.09   5 0.487 0.0629 16.2, 18.8 -0.73
KK/HlJ f 25.2 1.2   5 0.538 0.0478 23.9, 27.1 1.14
LG/J f 32.0 2.32   5 1.04 0.0726 28.5, 34.0 2.76
LP/J f 16.2 0.835   5 0.373 0.0516 15.0, 17.3 -1.0
MA/MyJ f 21.4 1.16   5 0.521 0.0544 19.7, 22.6 0.24
MRL/MpJ f 33.9 2.25   5 1.01 0.0664 30.3, 36.2 3.21
NOD/ShiLtJ f 19.4 1.8   5 0.804 0.0925 17.3, 22.2 -0.24
NON/ShiLtJ f 23.9 1.16   5 0.519 0.0485 22.4, 25.2 0.83
NOR/LtJ f 21.4 0.288   5 0.129 0.0134 21.1, 21.8 0.24
NZW/LacJ f 23.5 1.21   5 0.54 0.0513 21.8, 24.8 0.74
P/J f 19.6 0.984   5 0.44 0.0503 18.7, 21.1 -0.19
PL/J f 17.2 0.597   5 0.267 0.0348 16.3, 17.9 -0.76
PWK/PhJ f 14.8 0.653   5 0.292 0.0441 14.1, 15.8 -1.33
RIIIS/J f 17.0 1.37   5 0.614 0.0806 15.0, 18.2 -0.81
SEA/GnJ f 20.4 0.59   5 0.264 0.0289 19.9, 21.3 0.0
SJL/J f 19.1 1.02   5 0.457 0.0535 17.7, 20.2 -0.31
SM/J f 14.7 0.854   5 0.382 0.0581 13.8, 15.8 -1.35
SWR/J f 18.2 0.658   5 0.294 0.0361 17.4, 19.0 -0.52
WSB/EiJ f 12.8 0.99   5 0.443 0.0773 11.7, 14.1 -1.8


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 20.24 0.5471 21.3219 19.1581
A/J f 19.78 0.5471 20.8619 18.6981
AKR/J f 23.12 0.5471 24.2019 22.0381
BALB/cByJ f 20.08 0.5471 21.1619 18.9981
BTBR T+ Itpr3tf/J f 24.72 0.5471 25.8019 23.6381
BUB/BnJ f 20.36 0.5471 21.4419 19.2781
C3H/HeJ f 19.48 0.5471 20.5619 18.3981
C57BL/6J f 19.02 0.5471 20.1019 17.9381
C57BLKS/J f 19.64 0.5471 20.7219 18.5581
C57BR/cdJ f 18.78 0.5471 19.8619 17.6981
C58/J f 19.46 0.5471 20.5419 18.3781
CBA/J f 21.1 0.5471 22.1819 20.0181
CE/J f 17.98 0.5471 19.0619 16.8981
DBA/2J f 19.5 0.5471 20.5819 18.4181
FVB/NJ f 22.06 0.5471 23.1419 20.9781
I/LnJ f 17.32 0.5471 18.4019 16.2381
KK/HlJ f 25.18 0.5471 26.2619 24.0981
LG/J f 32.0 0.5471 33.0819 30.9181
LP/J f 16.18 0.5471 17.2619 15.0981
MA/MyJ f 21.42 0.5471 22.5019 20.3381
MRL/MpJ f 33.9 0.5471 34.9819 32.8181
NOD/ShiLtJ f 19.44 0.5471 20.5219 18.3581
NON/ShiLtJ f 23.94 0.5471 25.0219 22.8581
NOR/LtJ f 21.44 0.5471 22.5219 20.3581
NZW/LacJ f 23.54 0.5471 24.6219 22.4581
P/J f 19.56 0.5471 20.6419 18.4781
PL/J f 17.18 0.5471 18.2619 16.0981
PWK/PhJ f 14.82 0.5471 15.9019 13.7381
RIIIS/J f 17.02 0.5471 18.1019 15.9381
SEA/GnJ f 20.44 0.5471 21.5219 19.3581
SJL/J f 19.1 0.5471 20.1819 18.0181
SM/J f 14.7 0.5471 15.7819 13.6181
SWR/J f 18.24 0.5471 19.3219 17.1581
WSB/EiJ f 12.8 0.5471 13.8819 11.7181




  GWAS USING LINEAR MIXED MODELS