Project measure / variable:   Harrill2   bw_start_ctrl

ID, description, units MPD:44101   bw_start_ctrl   body weight at start of testing   [g]  control  
DB289 study
Data set, strains Harrill2   inbred   34 strains     sex: f     age: 6-8wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Harrill2 - body weight at start of testing control



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested34 strains
Mean of the strain means20.4   g
Median of the strain means19.6   g
SD of the strain means± 4.24
Coefficient of variation (CV)0.208
Min–max range of strain means12.8   –   34.6   g
Mean sample size per strain5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 33 2964.5442 89.8347 54.2875 < 0.0001
Residuals 136 225.052 1.6548


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 19.9 0.746   5 0.334 0.0375 18.9, 20.8 -0.12
A/J f 19.7 0.811   5 0.362 0.0412 18.9, 21.0 -0.16
AKR/J f 23.5 1.56   5 0.696 0.0664 21.7, 24.9 0.73
BALB/cByJ f 20.0 0.926   5 0.414 0.0462 18.7, 21.0 -0.09
BTBR T+ Itpr3tf/J f 24.6 0.785   5 0.351 0.0319 23.9, 25.9 0.99
BUB/BnJ f 20.1 1.52   5 0.679 0.0757 18.2, 22.0 -0.07
C3H/HeJ f 19.5 2.09   5 0.933 0.107 17.3, 22.6 -0.21
C57BL/6J f 19.2 0.669   5 0.299 0.0349 18.5, 20.2 -0.28
C57BLKS/J f 19.5 0.394   5 0.176 0.0202 18.9, 20.0 -0.21
C57BR/cdJ f 18.7 1.45   5 0.65 0.0778 17.0, 20.9 -0.4
C58/J f 19.5 1.05   5 0.472 0.054 18.8, 21.4 -0.21
CBA/J f 21.0 0.943   5 0.422 0.0449 20.1, 22.2 0.14
CE/J f 18.1 0.68   5 0.304 0.0375 17.4, 18.7 -0.54
DBA/2J f 19.5 0.802   5 0.359 0.041 18.5, 20.3 -0.21
FVB/NJ f 21.9 0.702   5 0.314 0.032 20.9, 22.6 0.35
I/LnJ f 17.2 1.04   5 0.466 0.0607 16.2, 18.6 -0.75
KK/HlJ f 24.9 1.49   5 0.666 0.0597 23.0, 26.7 1.06
LG/J f 31.9 2.05   5 0.918 0.0644 28.8, 33.9 2.71
LP/J f 16.1 0.702   5 0.314 0.0437 15.0, 16.9 -1.01
MA/MyJ f 21.3 0.792   5 0.354 0.0371 20.4, 22.1 0.21
MRL/MpJ f 34.6 1.85   5 0.829 0.0536 32.8, 37.6 3.35
NOD/ShiLtJ f 19.7 1.62   5 0.724 0.0823 18.0, 22.1 -0.16
NON/ShiLtJ f 23.1 2.46   5 1.1 0.107 19.1, 25.6 0.64
NOR/LtJ f 21.5 0.295   5 0.132 0.0137 21.0, 21.8 0.26
NZW/LacJ f 23.5 0.518   5 0.232 0.0221 22.8, 23.9 0.73
P/J f 19.5 1.93   5 0.863 0.099 16.9, 22.2 -0.21
PL/J f 18.3 2.53   5 1.13 0.139 16.5, 22.7 -0.49
PWK/PhJ f 14.8 0.669   5 0.299 0.0452 13.9, 15.7 -1.32
RIIIS/J f 17.1 1.26   5 0.562 0.0735 15.6, 18.8 -0.78
SEA/GnJ f 20.6 0.718   5 0.321 0.0348 19.8, 21.5 0.05
SJL/J f 19.3 1.24   5 0.556 0.0644 18.0, 21.0 -0.26
SM/J f 14.5 0.57   5 0.255 0.0393 14.1, 15.5 -1.39
SWR/J f 18.1 1.05   5 0.469 0.0579 16.9, 19.7 -0.54
WSB/EiJ f 12.8 1.18   5 0.53 0.0924 11.4, 14.1 -1.79


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 19.88 0.5753 21.0177 18.7423
A/J f 19.68 0.5753 20.8177 18.5423
AKR/J f 23.46 0.5753 24.5977 22.3223
BALB/cByJ f 20.02 0.5753 21.1577 18.8823
BTBR T+ Itpr3tf/J f 24.62 0.5753 25.7577 23.4823
BUB/BnJ f 20.06 0.5753 21.1977 18.9223
C3H/HeJ f 19.48 0.5753 20.6177 18.3423
C57BL/6J f 19.18 0.5753 20.3177 18.0423
C57BLKS/J f 19.5 0.5753 20.6377 18.3623
C57BR/cdJ f 18.7 0.5753 19.8377 17.5623
C58/J f 19.54 0.5753 20.6777 18.4023
CBA/J f 21.0 0.5753 22.1377 19.8623
CE/J f 18.14 0.5753 19.2777 17.0023
DBA/2J f 19.54 0.5753 20.6777 18.4023
FVB/NJ f 21.94 0.5753 23.0777 20.8023
I/LnJ f 17.18 0.5753 18.3177 16.0423
KK/HlJ f 24.94 0.5753 26.0777 23.8023
LG/J f 31.88 0.5753 33.0177 30.7423
LP/J f 16.06 0.5753 17.1977 14.9223
MA/MyJ f 21.34 0.5753 22.4777 20.2023
MRL/MpJ f 34.6 0.5753 35.7377 33.4623
NOD/ShiLtJ f 19.68 0.5753 20.8177 18.5423
NON/ShiLtJ f 23.12 0.5753 24.2577 21.9823
NOR/LtJ f 21.48 0.5753 22.6177 20.3423
NZW/LacJ f 23.46 0.5753 24.5977 22.3223
P/J f 19.5 0.5753 20.6377 18.3623
PL/J f 18.26 0.5753 19.3977 17.1223
PWK/PhJ f 14.78 0.5753 15.9177 13.6423
RIIIS/J f 17.08 0.5753 18.2177 15.9423
SEA/GnJ f 20.6 0.5753 21.7377 19.4623
SJL/J f 19.32 0.5753 20.4577 18.1823
SM/J f 14.5 0.5753 15.6377 13.3623
SWR/J f 18.1 0.5753 19.2377 16.9623
WSB/EiJ f 12.82 0.5753 13.9577 11.6823




  GWAS USING LINEAR MIXED MODELS