Phenotype measure:   Chesler2   pct_sleep_daily

ID, description, units MPD:43481   pct_sleep_daily   percentage of time spent sleeping, baseline   [%]
Data set, strains Chesler2   CC diallel w/par   51 strains     sex: both     age: 7-15wks
Procedure monitoring system
Ontology mappings

  STRAIN COMPARISON PLOT
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Chesler2 - percentage of time spent sleeping, baseline



  8-WAY DIALLEL CROSS VIEW
Female animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ 32.4 32.8 23.1 36.4 49.8 36.8
A ♀ 32.1 41.4 41.4 39.2 39.1
B6 ♀ 37.8 33.5 38.0 35.1 31.3 32.6
CAST ♀ 22.7 12.7 28.9 27.3 28.6 42.6
NOD ♀ 30.3 30.0 28.2 42.5 45.2
NZO ♀ 51.9 46.1 42.7 40.1 37.0
PWK ♀ 32.3 27.7 29.4 30.8
WSB ♀ 38.3 28.1 26.4 29.4 33.5 32.2 32.5

Male animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ 56.1 49.1 44.9 42.7 42.0 59.6 39.3 38.3
A ♀ 35.0 41.3 45.2 41.5 53.7 37.9 34.1
B6 ♀ 41.2 44.5 43.4 35.6 45.2 20.5 39.3
CAST ♀ 38.8 35.7 24.6 23.2 44.0 37.4 27.6 18.9
NOD ♀ 39.8 40.0 43.1 41.5 50.7 44.3 42.8
NZO ♀ 60.7 57.2 41.3 49.6
PWK ♀ 35.9 30.1 46.6 43.7
WSB ♀ 29.4 38.0 28.6 39.9 34.3 32.6

Cell coloring is based on strain mean Z-scores.     High-end         Mid         Low-end           Mouse over the cells to see additional info.


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested44 strains51 strains
Mean of the strain means34.3   % 40.2   %
Median of the strain means32.7   % 41.2   %
SD of the strain means± 7.48 ± 9.10
Coefficient of variation (CV)0.218 0.226
Min–max range of strain means12.7   –   51.9   % 18.9   –   60.7   %
Mean sample size per strain3.0   mice 3.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1930.8378 1930.8378 31.4187 < 0.0001
strain 20 5985.9481 299.2974 4.8702 < 0.0001
sex:strain 20 1956.0038 97.8002 1.5914 0.0618
Residuals 147 9033.8964 61.4551


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 56.1 0.0   1   0.0 0.0 56.1, 56.1 1.75
129SAF1 f 32.4 6.7   3 3.87 0.207 26.4, 39.7 -0.26
129SAF1 m 49.1 9.84   6 4.02 0.2 37.0, 60.2 0.98
129SB6F1 f 32.8 8.61   6 3.52 0.262 21.2, 41.3 -0.2
129SB6F1 m 44.9 8.12   5 3.63 0.181 36.1, 56.1 0.52
129SCASTF1 f 23.1 2.34   2   1.65 0.101 21.5, 24.8 -1.5
129SCASTF1 m 42.7 0.0   1   0.0 0.0 42.7, 42.7 0.27
129SNODF1 f 36.4 5.15   8 1.82 0.142 27.4, 43.3 0.28
129SNODF1 m 42.0 7.8   3 4.5 0.186 34.2, 49.8 0.2
129SNZOF1 f 49.8 0.0   1   0.0 0.0 49.8, 49.8 2.07
129SNZOF1 m 59.6 9.63   5 4.31 0.162 45.1, 68.1 2.13
129SPWKF1 f 36.8 8.73   3 5.04 0.237 27.0, 43.6 0.33
129SPWKF1 m 39.3 0.0   1   0.0 0.0 39.3, 39.3 -0.1
129SWSBF1 m 38.3 0.0   1   0.0 0.0 38.3, 38.3 -0.21
AB6F1 f 32.1 7.96   4 3.98 0.248 23.2, 40.9 -0.3
AB6F1 m 41.3 4.59   6 1.87 0.111 32.7, 44.6 0.12
ACASTF1 f 41.4 3.38   4 1.69 0.0816 36.7, 44.2 0.95
ACASTF1 m 45.2 3.58   4 1.79 0.0793 42.2, 50.3 0.55
A/J m 35.0 4.21   3 2.43 0.12 32.3, 39.9 -0.57
ANODF1 f 41.4 0.0   1   0.0 0.0 41.4, 41.4 0.95
ANODF1 m 41.5 7.75   7 2.93 0.187 33.6, 52.1 0.14
ANZOF1 f 39.2 0.0   1   0.0 0.0 39.2, 39.2 0.65
ANZOF1 m 53.7 0.0   1   0.0 0.0 53.7, 53.7 1.48
APWKF1 f 39.1 5.87   3 3.39 0.15 32.5, 43.5 0.64
APWKF1 m 37.9 3.47   5 1.55 0.0916 33.7, 42.9 -0.25
AWSBF1 m 34.1 0.0   1   0.0 0.0 34.1, 34.1 -0.67
B6129SF1/J f 37.8 4.35   6 1.78 0.115 33.8, 45.9 0.46
B6129SF1/J m 41.2 10.1   11 3.04 0.245 24.9, 53.3 0.11
B6AF1/J f 33.5 7.64   5 3.42 0.228 23.2, 41.9 -0.11
B6AF1/J m 44.5 4.35   4 2.18 0.0977 41.0, 50.5 0.47
B6CASTF1 m 35.6 0.0   1   0.0 0.0 35.6, 35.6 -0.51
B6NODF1 f 38.0 16.9   2   11.9 0.444 26.1, 50.0 0.49
B6NODF1 m 45.2 12.1   2   8.54 0.267 36.6, 53.7 0.55
B6NZOF1 f 35.1 12.9   3 7.46 0.368 20.2, 43.5 0.1
B6NZOF1 m 20.5 23.1   2   16.3 1.13 4.18, 36.9 -2.17
B6PWKF1 f 31.3 2.45   2   1.73 0.0782 29.6, 33.0 -0.4
B6WSBF1 f 32.6 9.13   8 3.23 0.28 16.0, 41.1 -0.23
B6WSBF1 m 39.3 1.2   3 0.691 0.0304 38.0, 40.4 -0.1
C57BL/6J m 43.4 4.25   3 2.46 0.098 40.5, 48.3 0.35
CAST129SF1 m 38.8 10.2   6 4.17 0.263 20.9, 48.9 -0.15
CASTAF1 f 22.7 0.0   1   0.0 0.0 22.7, 22.7 -1.55
CASTAF1 m 35.7 0.0   1   0.0 0.0 35.7, 35.7 -0.5
CASTB6F1 f 12.7 0.0   1   0.0 0.0 12.7, 12.7 -2.89
CASTB6F1 m 24.6 2.37   3 1.37 0.0964 21.9, 26.2 -1.71
CAST/EiJ f 28.9 4.76   3 2.75 0.165 25.1, 34.2 -0.72
CAST/EiJ m 23.2 6.52   2   4.61 0.281 18.6, 27.8 -1.87
CASTNODF1 m 44.0 4.62   6 1.89 0.105 38.8, 50.6 0.42
CASTNZOF1 f 27.3 1.81   3 1.05 0.0664 26.1, 29.4 -0.94
CASTNZOF1 m 37.4 0.0   1   0.0 0.0 37.4, 37.4 -0.31
CASTPWKF1 f 28.6 7.67   5 3.43 0.269 17.7, 36.4 -0.77
CASTPWKF1 m 27.6 3.7   6 1.51 0.134 23.5, 32.9 -1.39
CASTWSBF1 f 42.6 0.0   1   0.0 0.0 42.6, 42.6 1.11
CASTWSBF1 m 18.9 0.0   1   0.0 0.0 18.9, 18.9 -2.34
NOD129SF1 f 30.3 0.0   1   0.0 0.0 30.3, 30.3 -0.54
NOD129SF1 m 39.8 0.0   1   0.0 0.0 39.8, 39.8 -0.05
NODAF1 f 30.0 15.0   3 8.65 0.499 13.6, 42.8 -0.58
NODAF1 m 40.0 16.0   4 7.98 0.399 17.0, 53.8 -0.02
NODB6F1 f 28.2 0.0   1   0.0 0.0 28.2, 28.2 -0.82
NODB6F1 m 43.1 0.375   2   0.265 0.0087 42.8, 43.4 0.32
NODCASTF1 m 41.5 2.67   2   1.88 0.0642 39.7, 43.4 0.14
NODNZOF1 f 42.5 6.81   6 2.78 0.16 35.6, 55.1 1.09
NODNZOF1 m 44.3 9.11   8 3.22 0.206 33.8, 61.6 0.45
NODPWKF1 f 45.2 5.21   2   3.69 0.115 41.5, 48.9 1.45
NODPWKF1 m 42.8 6.37   8 2.25 0.149 28.9, 48.2 0.28
NOD/ShiLtJ m 50.7 0.0   1   0.0 0.0 50.7, 50.7 1.15
NZO129SF1 f 51.9 0.0   1   0.0 0.0 51.9, 51.9 2.35
NZO129SF1 m 60.7 0.0   1   0.0 0.0 60.7, 60.7 2.25
NZOAF1 f 46.1 0.0   1   0.0 0.0 46.1, 46.1 1.57
NZOB6F1 f 42.7 4.99   5 2.23 0.117 39.1, 51.2 1.12
NZOB6F1 m 57.2 3.82   8 1.35 0.0668 50.7, 63.9 1.87
NZO/HlLtJ m 49.6 0.0   1   0.0 0.0 49.6, 49.6 1.03
NZONODF1 f 40.1 0.0   1   0.0 0.0 40.1, 40.1 0.77
NZONODF1 m 41.3 0.0   1   0.0 0.0 41.3, 41.3 0.12
NZOWSBF1 f 37.0 7.65   3 4.42 0.207 29.8, 45.0 0.36
PWK129SF1 f 32.3 9.27   8 3.28 0.287 20.3, 46.6 -0.27
PWKAF1 f 27.7 1.75   2   1.24 0.0633 26.4, 28.9 -0.89
PWKAF1 m 35.9 0.0   1   0.0 0.0 35.9, 35.9 -0.47
PWKB6F1 m 30.1 0.0   1   0.0 0.0 30.1, 30.1 -1.11
PWKNODF1 f 29.4 0.0   1   0.0 0.0 29.4, 29.4 -0.66
PWKNODF1 m 46.6 0.0   1   0.0 0.0 46.6, 46.6 0.7
PWK/PhJ f 30.8 9.28   4 4.64 0.302 16.9, 36.4 -0.47
PWK/PhJ m 43.7 0.555   3 0.321 0.0127 43.4, 44.4 0.38
WSB129SF1 f 38.3 6.46   2   4.57 0.169 33.7, 42.9 0.53
WSBAF1 f 28.1 7.92   2   5.6 0.282 22.5, 33.7 -0.83
WSBAF1 m 29.4 7.71   2   5.45 0.262 23.9, 34.9 -1.19
WSBB6F1 f 26.4 0.0   1   0.0 0.0 26.4, 26.4 -1.06
WSBB6F1 m 38.0 4.1   3 2.36 0.108 34.4, 42.5 -0.24
WSBCASTF1 m 28.6 4.41   5 1.97 0.154 21.5, 33.0 -1.28
WSB/EiJ f 32.5 9.85   3 5.69 0.303 21.4, 40.1 -0.24
WSB/EiJ m 32.6 4.12   3 2.38 0.126 28.0, 36.0 -0.84
WSBNODF1 f 29.4 0.0   1   0.0 0.0 29.4, 29.4 -0.66
WSBNODF1 m 39.9 8.67   2   6.13 0.217 33.8, 46.0 -0.03
WSBNZOF1 f 33.5 4.58   6 1.87 0.137 27.4, 39.7 -0.11
WSBNZOF1 m 34.3 7.18   3 4.15 0.21 27.0, 41.3 -0.65
WSBPWKF1 f 32.2 10.5   3 6.07 0.326 25.1, 44.3 -0.28


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129SAF1 f 32.4067 4.526 41.3512 23.4622
129SAF1 m 49.08 3.2004 55.4047 42.7553
129SB6F1 f 32.8333 3.2004 39.1581 26.5086
129SB6F1 m 44.922 3.5059 51.8504 37.9936
129SNODF1 f 36.38 2.7716 41.8574 30.9026
129SNODF1 m 41.9567 4.526 50.9012 33.0122
AB6F1 f 32.0575 3.9197 39.8037 24.3113
AB6F1 m 41.295 3.2004 47.6197 34.9703
ACASTF1 f 41.4425 3.9197 49.1887 33.6963
ACASTF1 m 45.155 3.9197 52.9012 37.4088
APWKF1 f 39.13 4.526 48.0745 30.1855
APWKF1 m 37.906 3.5059 44.8344 30.9776
B6129SF1/J f 37.7967 3.2004 44.1214 31.4719
B6129SF1/J m 41.1818 2.3636 45.8529 36.5107
B6AF1/J f 33.464 3.5059 40.3924 26.5356
B6AF1/J m 44.5275 3.9197 52.2737 36.7813
B6NODF1 f 38.03 5.5432 48.9847 27.0753
B6NODF1 m 45.16 5.5432 56.1147 34.2053
B6NZOF1 f 35.0567 4.526 44.0012 26.1122
B6NZOF1 m 20.515 5.5432 31.4697 9.5603
B6WSBF1 f 32.61 2.7716 38.0874 27.1326
B6WSBF1 m 39.29 4.526 48.2345 30.3455
CAST/EiJ f 28.8533 4.526 37.7978 19.9088
CAST/EiJ m 23.23 5.5432 34.1847 12.2753
CASTPWKF1 f 28.566 3.5059 35.4944 21.6376
CASTPWKF1 m 27.6333 3.2004 33.9581 21.3086
NODAF1 f 30.0333 4.526 38.9778 21.0888
NODAF1 m 40.0425 3.9197 47.7887 32.2963
NODNZOF1 f 42.51 3.2004 48.8347 36.1853
NODNZOF1 m 44.2862 2.7716 49.7636 38.8089
NODPWKF1 f 45.175 5.5432 56.1297 34.2203
NODPWKF1 m 42.8337 2.7716 48.3111 37.3564
NZOB6F1 f 42.7 3.5059 49.6284 35.7716
NZOB6F1 m 57.2125 2.7716 62.6899 51.7351
PWK/PhJ f 30.775 3.9197 38.5212 23.0288
PWK/PhJ m 43.7433 4.526 52.6878 34.7988
WSBAF1 f 28.06 5.5432 39.0147 17.1053
WSBAF1 m 29.405 5.5432 40.3597 18.4503
WSB/EiJ f 32.4567 4.526 41.4012 23.5122
WSB/EiJ m 32.5867 4.526 41.5312 23.6422
WSBNZOF1 f 33.4717 3.2004 39.7964 27.1469
WSBNZOF1 m 34.2533 4.526 43.1978 25.3088


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129SAF1 both 40.7433 2.7716 46.2207 35.266
129SB6F1 both 38.8777 2.3735 43.5682 34.1871
129SNODF1 both 39.1683 2.6536 44.4125 33.9242
AB6F1 both 36.6762 2.5301 41.6764 31.6761
ACASTF1 both 43.2988 2.7716 48.7761 37.8214
APWKF1 both 38.518 2.8625 44.175 32.861
B6129SF1/J both 39.4892 1.9893 43.4206 35.5579
B6AF1/J both 38.9957 2.6294 44.192 33.7995
B6NODF1 both 41.595 3.9197 49.3412 33.8488
B6NZOF1 both 27.7858 3.5781 34.8571 20.7146
B6WSBF1 both 35.95 2.6536 41.1942 30.7058
CAST/EiJ both 26.0417 3.5781 33.1129 18.9704
CASTPWKF1 both 28.0997 2.3735 32.7902 23.4091
NODAF1 both 35.0379 2.9937 40.9542 29.1217
NODNZOF1 both 43.3981 2.1169 47.5815 39.2147
NODPWKF1 both 44.0044 3.0988 50.1283 37.8805
NZOB6F1 both 49.9562 2.2346 54.3722 45.5403
PWK/PhJ both 37.2592 2.9937 43.1754 31.3429
WSBAF1 both 28.7325 3.9197 36.4787 20.9863
WSB/EiJ both 32.5217 3.2004 38.8464 26.1969
WSBNZOF1 both 33.8625 2.7716 39.3399 28.3851




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA