Project measure / variable:   Chesler2   immobile_OFT

ID, description, units MPD:43460   immobile_OFT   time spent immobile during first minute, 10 min test   [s]  
Data set, strains Chesler2   CC diallel w/par   50 strains     sex: both     age: 7-15wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Chesler2 - time spent immobile during first minute, 10 min test



  8-WAY DIALLEL CROSS VIEW
Female animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ 5.48 1.67 0.0233 4.44 — 1.53 0.300 0.368
A ♀ — — — — — 0.135 0.530 —
B6 ♀ 1.30 — — — 0.465 0.150 — —
CAST ♀ — — — — — 0.0900 0.227 0.235
NOD ♀ — — — 0.268 — — — —
NZO ♀ 0.335 9.53 — — 41.6 — — 0.803
PWK ♀ 0.365 0.634 — — — — — —
WSB ♀ 1.47 3.67 — — — 3.71 0.0350 0.735

Male animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ — 1.98 0.318 0.270 3.27 3.47 0.930 2.27
A ♀ — — 1.11 1.87 1.45 — 0.200 —
B6 ♀ — 0.200 — 0.100 — 0.465 — —
CAST ♀ 0.400 — 0.157 — 0.557 — 0.488 0.470
NOD ♀ 1.00 — 0.0650 0.265 — 2.49 — —
NZO ♀ 1.13 — 0.0700 — 1.94 — — —
PWK ♀ — 0.100 0.135 — 0.170 — — —
WSB ♀ — 0.400 0.0233 0.200 1.74 0.370 — —

Cell coloring is based on strain mean Z-scores.     High-end         Mid         Low-end           Mouse over the cells to see additional info.


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested41 strains39 strains
Mean of the strain means1.95   s 0.771   s
Median of the strain means0.235   s 0.370   s
SD of the strain means± 6.62 ± 0.939
Coefficient of variation (CV)3.39 1.22
Min–max range of strain means0   –   41.6   s 0   –   3.47   s
Mean sample size per strain2.1   mice 2.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.1109 0.1109 0.0249 0.8752
strain 10 56.0112 5.6011 1.2599 0.2807
sex:strain 10 29.896 2.9896 0.6725 0.7437
Residuals 46 204.5036 4.4457


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 5.48 0.0   1   0.0 0.0 5.48, 5.48 0.53
129SAF1 f 1.67 2.08   2   1.47 1.24 0.2, 3.14 -0.04
129SAF1 m 1.98 2.23   3 1.29 1.13 1.29
129SB6F1 f 0.0233 0.0404   3 0.0233 1.73 -0.29
129SB6F1 m 0.318 0.391   4 0.195 1.23 -0.48
129SCASTF1 f 4.44 6.28   2   4.44 1.41 0.38
129SCASTF1 m 0.27 0.0   1   0.0 0.0 0.27, 0.27 -0.53
129SNODF1 f 0.0 0.0   1   0.0 0.0 -0.3
129SNODF1 m 3.27 0.849   2   0.6 0.259 2.67, 3.87 2.66
129SNZOF1 f 1.53 0.0   1   0.0 0.0 1.53, 1.53 -0.06
129SNZOF1 m 3.47 5.66   3 3.27 1.63 2.87
129SPWKF1 f 0.3 0.517   4 0.258 1.72 -0.25
129SPWKF1 m 0.93 0.0   1   0.0 0.0 0.93, 0.93 0.17
129SWSBF1 f 0.368 0.364   4 0.182 0.992 -0.24
129SWSBF1 m 2.27 2.08   2   1.47 0.916 0.8, 3.74 1.6
AB6F1 f 0.0 0.0   1   0.0 0.0 -0.3
AB6F1 m 1.11 0.801   3 0.462 0.721 0.33, 1.93 0.36
ACASTF1 m 1.87 0.0   1   0.0 0.0 1.87, 1.87 1.17
ANODF1 m 1.45 2.61   5 1.17 1.79 0.72
ANZOF1 f 0.135 0.0919   2   0.065 0.681 0.07, 0.2 -0.27
APWKF1 f 0.53 0.0   1   0.0 0.0 0.53, 0.53 -0.22
APWKF1 m 0.2 0.0   1   0.0 0.0 0.2, 0.2 -0.61
AWSBF1 m 0.0 0.0   1   0.0 0.0 -0.82
B6129SF1/J f 1.3 1.84   2   1.3 1.41 -0.1
B6AF1/J f 0.0 0.0   1   0.0 0.0 -0.3
B6AF1/J m 0.2 0.099   2   0.07 0.495 0.13, 0.27 -0.61
B6CASTF1 m 0.1 0.141   2   0.1 1.41 -0.71
B6NODF1 f 0.465 0.658   2   0.465 1.41 -0.22
B6NODF1 m 0.0 0.0   2   0.0 0.0 -0.82
B6NZOF1 f 0.15 0.146   4 0.0729 0.972 -0.27
B6NZOF1 m 0.465 0.658   2   0.465 1.41 -0.33
B6PWKF1 f 0.0 0.0   2   0.0 0.0 -0.3
CAST129SF1 m 0.4 0.478   3 0.276 1.2 -0.4
CASTAF1 f 0.0 0.0   1   0.0 0.0 -0.3
CASTAF1 m 0.0 0.0   2   0.0 0.0 -0.82
CASTB6F1 f 0.0 0.0   1   0.0 0.0 -0.3
CASTB6F1 m 0.157 0.15   3 0.0867 0.958 0.07, 0.33 -0.65
CASTNODF1 m 0.557 0.964   3 0.557 1.73 -0.23
CASTNZOF1 f 0.09 0.156   3 0.09 1.73 -0.28
CASTNZOF1 m 0.0 0.0   1   0.0 0.0 -0.82
CASTPWKF1 f 0.227 0.224   5 0.1 0.986 0.0667, 0.6 -0.26
CASTPWKF1 m 0.488 0.761   6 0.311 1.56 -0.3
CASTWSBF1 f 0.235 0.332   2   0.235 1.41 -0.26
CASTWSBF1 m 0.47 0.0   1   0.0 0.0 0.47, 0.47 -0.32
NOD129SF1 f 0.0 0.0   1   0.0 0.0 -0.3
NOD129SF1 m 1.0 1.41   2   1.0 1.41 0.24
NODAF1 f 0.0 0.0   1   0.0 0.0 -0.3
NODAF1 m 0.0 0.0   1   0.0 0.0 -0.82
NODB6F1 f 0.0 0.0   1   0.0 0.0 -0.3
NODB6F1 m 0.065 0.0919   2   0.065 1.41 -0.75
NODCASTF1 f 0.268 0.367   5 0.164 1.37 -0.25
NODCASTF1 m 0.265 0.375   2   0.265 1.41 -0.54
NODNZOF1 f 0.0 0.0   2   0.0 0.0 -0.3
NODNZOF1 m 2.49 2.17   3 1.26 0.872 0.4, 4.74 1.83
NODPWKF1 f 0.0 0.0   1   0.0 0.0 -0.3
NZO129SF1 f 0.335 0.474   2   0.335 1.41 -0.24
NZO129SF1 m 1.13 0.0   1   0.0 0.0 1.13, 1.13 0.38
NZOAF1 f 9.53 10.9   3 6.31 1.15 2.34, 22.1 1.14
NZOB6F1 m 0.07 0.0   1   0.0 0.0 0.07, 0.07 -0.75
NZONODF1 f 41.6 0.0   1   0.0 0.0 41.6, 41.6 5.99
NZONODF1 m 1.94 2.74   2   1.93 1.41 1.25
NZOWSBF1 f 0.803 0.548   3 0.316 0.682 0.2, 1.27 -0.17
PWK129SF1 f 0.365 0.445   4 0.222 1.22 -0.24
PWKAF1 f 0.634 0.897   2   0.634 1.41 -0.2
PWKAF1 m 0.1 0.141   2   0.1 1.41 -0.71
PWKB6F1 m 0.135 0.191   2   0.135 1.41 -0.68
PWKNODF1 f 0.0 0.0   1   0.0 0.0 -0.3
PWKNODF1 m 0.17 0.141   2   0.1 0.832 0.07, 0.27 -0.64
WSB129SF1 f 1.47 1.68   3 0.968 1.14 0.4, 3.4 -0.07
WSBAF1 f 3.67 0.0   1   0.0 0.0 3.67, 3.67 0.26
WSBAF1 m 0.4 0.467   2   0.33 1.17 0.07, 0.73 -0.4
WSBB6F1 f 0.0 0.0   2   0.0 0.0 -0.3
WSBB6F1 m 0.0233 0.0404   3 0.0233 1.73 -0.8
WSBCASTF1 m 0.2 0.235   4 0.118 1.18 -0.61
WSB/EiJ f 0.735 1.04   2   0.735 1.41 -0.18
WSBNODF1 f 0.0 0.0   1   0.0 0.0 -0.3
WSBNODF1 m 1.74 2.45   2   1.73 1.41 1.03
WSBNZOF1 f 3.71 5.83   6 2.38 1.57 0.27
WSBNZOF1 m 0.37 0.141   2   0.1 0.382 0.27, 0.47 -0.43
WSBPWKF1 f 0.035 0.0495   2   0.035 1.41 -0.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129SAF1 f 1.67 1.4909 4.6711 -1.3311
129SAF1 m 1.9767 1.2173 4.427 -0.4737
129SB6F1 f 0.0233 1.2173 2.4737 -2.427
129SB6F1 m 0.3175 1.0542 2.4396 -1.8046
129SWSBF1 f 0.3675 1.0542 2.4896 -1.7546
129SWSBF1 m 2.27 1.4909 5.2711 -0.7311
B6NODF1 f 0.465 1.4909 3.4661 -2.5361
B6NODF1 m 0.0 1.4909 3.0011 -3.0011
B6NZOF1 f 0.15 1.0542 2.2721 -1.9721
B6NZOF1 m 0.465 1.4909 3.4661 -2.5361
CASTPWKF1 f 0.2274 0.9429 2.1254 -1.6707
CASTPWKF1 m 0.4883 0.8608 2.221 -1.2443
NODCASTF1 f 0.268 0.9429 2.1661 -1.6301
NODCASTF1 m 0.265 1.4909 3.2661 -2.7361
NODNZOF1 f 0.0 1.4909 3.0011 -3.0011
NODNZOF1 m 2.4933 1.2173 4.9437 0.043
PWKAF1 f 0.634 1.4909 3.635 -2.3671
PWKAF1 m 0.1 1.4909 3.1011 -2.9011
WSBB6F1 f 0.0 1.4909 3.0011 -3.0011
WSBB6F1 m 0.0233 1.2173 2.4737 -2.427
WSBNZOF1 f 3.705 0.8608 5.4377 1.9723
WSBNZOF1 m 0.37 1.4909 3.3711 -2.6311


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129SAF1 both 1.8233 0.9624 3.7605 -0.1139
129SB6F1 both 0.1704 0.8052 1.7912 -1.4504
129SWSBF1 both 1.3188 0.913 3.1565 -0.519
B6NODF1 both 0.2325 1.0542 2.3546 -1.8896
B6NZOF1 both 0.3075 0.913 2.1453 -1.5303
CASTPWKF1 both 0.3579 0.6384 1.6428 -0.9271
NODCASTF1 both 0.2665 0.882 2.042 -1.509
NODNZOF1 both 1.2467 0.9624 3.1839 -0.6905
PWKAF1 both 0.367 1.0542 2.4891 -1.7551
WSBB6F1 both 0.0117 0.9624 1.9489 -1.9255
WSBNZOF1 both 2.0375 0.8608 3.7702 0.3048




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA