Phenotype measure:   Chesler2   distance_center_OFT

ID, description, units MPD:43456   distance_center_OFT   integrated distance from absolute center, 10 min test   [cm]
Data set, strains Chesler2   CC diallel w/par   41 strains     sex: both     age: 7-15wks
Procedure open field test
Ontology mappings

  STRAIN COMPARISON PLOT
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Chesler2 - integrated distance from absolute center, 10 min test



  8-WAY DIALLEL CROSS VIEW
Female animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ 9.56 5.37 5.43 4.88 2.80 7.58 4.38 3.56
A ♀ 3.59 13.1 4.73
B6 ♀ 7.56 4.28 2.50 4.61 3.90
CAST ♀ 5.88 1.40 6.35 4.88 5.27
NOD ♀ 6.31 9.01 1.83 4.14 5.48 3.07
NZO ♀ 8.77 11.6 11.0 7.27
PWK ♀ 4.31 9.84 1.89
WSB ♀ 6.07 7.86 2.79 2.57 5.67 6.96 2.28

Male animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ 7.89 2.50 5.78 9.38 10.9 2.42 5.03
A ♀ 4.08 8.64 5.31 7.52 2.89
B6 ♀ 4.23 2.71 3.00 7.14
CAST ♀ 4.95 9.17 3.76 3.77 4.09 6.33 2.15
NOD ♀ 8.32 2.78 1.98 2.24 5.39
NZO ♀ 6.73 8.26 6.69
PWK ♀ 7.00 2.07 3.51
WSB ♀ 4.59 4.13 4.05 4.22 5.48

Cell coloring is based on strain mean Z-scores.     High-end         Mid         Low-end           Mouse over the cells to see additional info.


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested41 strains39 strains
Mean of the strain means5.62   cm 5.16   cm
Median of the strain means5.27   cm 4.59   cm
SD of the strain means± 2.80 ± 2.36
Coefficient of variation (CV)0.499 0.458
Min–max range of strain means1.40   –   13.1   cm 1.98   –   10.9   cm
Mean sample size per strain2.1   mice 2.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.4686 1.4686 0.2782 0.6004
strain 10 134.1896 13.419 2.5421 0.0156
sex:strain 10 54.4958 5.4496 1.0324 0.4323
Residuals 46 242.8158 5.2786


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 9.56 0.0   1   0.0 0.0 9.56, 9.56 1.41
129SAF1 f 5.37 2.79   2   1.97 0.521 3.39, 7.34 -0.09
129SAF1 m 7.89 5.97   3 3.45 0.756 2.32, 14.2 1.16
129SB6F1 f 5.43 3.46   3 2.0 0.638 3.4, 9.43 -0.07
129SB6F1 m 2.5 0.842   4 0.421 0.337 1.88, 3.73 -1.12
129SCASTF1 f 4.88 2.95   2   2.09 0.605 2.79, 6.96 -0.26
129SCASTF1 m 5.78 0.0   1   0.0 0.0 5.78, 5.78 0.26
129SNODF1 f 2.8 0.0   1   0.0 0.0 2.8, 2.8 -1.01
129SNODF1 m 9.38 0.339   2   0.24 0.0362 9.14, 9.62 1.79
129SNZOF1 f 7.58 0.0   1   0.0 0.0 7.58, 7.58 0.7
129SNZOF1 m 10.9 2.61   3 1.5 0.239 7.91, 12.7 2.43
129SPWKF1 f 4.38 1.44   4 0.722 0.33 2.52, 6.02 -0.44
129SPWKF1 m 2.42 0.0   1   0.0 0.0 2.42, 2.42 -1.16
129SWSBF1 f 3.56 1.28   4 0.639 0.359 2.25, 5.21 -0.73
129SWSBF1 m 5.03 4.01   2   2.83 0.798 2.19, 7.86 -0.05
AB6F1 f 3.59 0.0   1   0.0 0.0 3.59, 3.59 -0.72
AB6F1 m 4.08 0.401   3 0.231 0.0981 3.65, 4.44 -0.46
ACASTF1 m 8.64 0.0   1   0.0 0.0 8.64, 8.64 1.47
ANODF1 m 5.31 1.99   5 0.891 0.375 3.69, 8.53 0.07
ANZOF1 f 13.1 1.99   2   1.41 0.153 11.6, 14.5 2.67
APWKF1 f 4.73 0.0   1   0.0 0.0 4.73, 4.73 -0.32
APWKF1 m 7.52 0.0   1   0.0 0.0 7.52, 7.52 1.0
AWSBF1 m 2.89 0.0   1   0.0 0.0 2.89, 2.89 -0.96
B6129SF1/J f 7.56 0.438   2   0.31 0.058 7.25, 7.87 0.69
B6AF1/J f 4.28 0.0   1   0.0 0.0 4.28, 4.28 -0.48
B6AF1/J m 4.23 1.68   2   1.19 0.398 3.04, 5.42 -0.39
B6CASTF1 m 2.71 0.7   2   0.495 0.258 2.22, 3.21 -1.03
B6NODF1 f 2.5 0.672   2   0.475 0.269 2.02, 2.97 -1.11
B6NODF1 m 3.0 2.47   2   1.75 0.825 1.25, 4.75 -0.91
B6NZOF1 f 4.61 2.57   4 1.28 0.557 1.16, 7.21 -0.36
B6NZOF1 m 7.14 1.58   2   1.12 0.222 6.02, 8.26 0.84
B6PWKF1 f 3.9 2.02   2   1.43 0.519 2.47, 5.33 -0.61
CAST129SF1 m 4.95 3.48   3 2.01 0.703 1.83, 8.7 -0.09
CASTAF1 f 5.88 0.0   1   0.0 0.0 5.88, 5.88 0.09
CASTAF1 m 9.17 3.15   2   2.23 0.344 6.94, 11.4 1.7
CASTB6F1 f 1.4 0.0   1   0.0 0.0 1.4, 1.4 -1.5
CASTB6F1 m 3.76 0.787   3 0.454 0.209 2.86, 4.32 -0.59
CASTNODF1 m 3.77 2.45   3 1.41 0.649 2.22, 6.59 -0.59
CASTNZOF1 f 6.35 1.31   3 0.756 0.206 4.85, 7.25 0.26
CASTNZOF1 m 4.09 0.0   1   0.0 0.0 4.09, 4.09 -0.45
CASTPWKF1 f 4.88 2.39   5 1.07 0.489 2.21, 8.27 -0.26
CASTPWKF1 m 6.33 1.84   6 0.751 0.291 3.82, 8.82 0.5
CASTWSBF1 f 5.27 0.255   2   0.18 0.0483 5.09, 5.45 -0.12
CASTWSBF1 m 2.15 0.0   1   0.0 0.0 2.15, 2.15 -1.27
NOD129SF1 f 6.31 0.0   1   0.0 0.0 6.31, 6.31 0.25
NOD129SF1 m 8.32 1.16   2   0.82 0.139 7.5, 9.14 1.34
NODAF1 f 9.01 0.0   1   0.0 0.0 9.01, 9.01 1.21
NODAF1 m 2.78 0.0   1   0.0 0.0 2.78, 2.78 -1.01
NODB6F1 f 1.83 0.0   1   0.0 0.0 1.83, 1.83 -1.35
NODB6F1 m 1.98 1.35   2   0.955 0.684 1.02, 2.93 -1.34
NODCASTF1 f 4.14 1.53   5 0.686 0.37 2.03, 6.12 -0.53
NODCASTF1 m 2.24 0.325   2   0.23 0.145 2.01, 2.47 -1.23
NODNZOF1 f 5.48 1.36   2   0.965 0.249 4.52, 6.45 -0.05
NODNZOF1 m 5.39 1.89   3 1.09 0.35 3.23, 6.73 0.1
NODPWKF1 f 3.07 0.0   1   0.0 0.0 3.07, 3.07 -0.91
NZO129SF1 f 8.77 1.65   2   1.17 0.189 7.6, 9.94 1.12
NZO129SF1 m 6.73 0.0   1   0.0 0.0 6.73, 6.73 0.67
NZOAF1 f 11.6 1.22   3 0.703 0.105 10.2, 12.4 2.13
NZOB6F1 m 8.26 0.0   1   0.0 0.0 8.26, 8.26 1.31
NZONODF1 f 11.0 0.0   1   0.0 0.0 11.0, 11.0 1.92
NZONODF1 m 6.69 0.424   2   0.3 0.0634 6.39, 6.99 0.65
NZOWSBF1 f 7.27 3.28   3 1.9 0.452 5.28, 11.1 0.59
PWK129SF1 f 4.31 1.48   4 0.739 0.343 2.74, 5.99 -0.47
PWKAF1 f 9.84 1.2   2   0.845 0.121 9.0, 10.7 1.51
PWKAF1 m 7.0 0.396   2   0.28 0.0566 6.72, 7.28 0.78
PWKB6F1 m 2.07 0.594   2   0.42 0.287 1.65, 2.49 -1.31
PWKNODF1 f 1.89 0.0   1   0.0 0.0 1.89, 1.89 -1.33
PWKNODF1 m 3.51 0.94   2   0.665 0.268 2.85, 4.18 -0.7
WSB129SF1 f 6.07 2.68   3 1.55 0.442 3.05, 8.18 0.16
WSBAF1 f 7.86 0.0   1   0.0 0.0 7.86, 7.86 0.8
WSBAF1 m 4.59 0.453   2   0.32 0.0986 4.27, 4.91 -0.24
WSBB6F1 f 2.79 0.276   2   0.195 0.099 2.59, 2.98 -1.01
WSBB6F1 m 4.13 1.02   3 0.589 0.247 2.97, 4.88 -0.43
WSBCASTF1 m 4.05 2.34   4 1.17 0.577 1.29, 6.31 -0.47
WSB/EiJ f 2.28 0.134   2   0.095 0.0591 2.18, 2.37 -1.19
WSBNODF1 f 2.57 0.0   1   0.0 0.0 2.57, 2.57 -1.09
WSBNODF1 m 4.22 3.32   2   2.35 0.785 1.88, 6.57 -0.4
WSBNZOF1 f 5.67 1.97   6 0.806 0.348 3.67, 7.95 0.02
WSBNZOF1 m 5.48 2.52   2   1.78 0.459 3.7, 7.26 0.14
WSBPWKF1 f 6.96 0.714   2   0.505 0.103 6.45, 7.46 0.48


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129SAF1 f 5.365 1.6246 8.6351 2.0949
129SAF1 m 7.89 1.3265 10.5601 5.2199
129SB6F1 f 5.43 1.3265 8.1001 2.7599
129SB6F1 m 2.5025 1.1488 4.8148 0.1902
129SWSBF1 f 3.5575 1.1488 5.8698 1.2452
129SWSBF1 m 5.025 1.6246 8.2951 1.7549
B6NODF1 f 2.495 1.6246 5.7651 0.0
B6NODF1 m 3.0 1.6246 6.2701 0.0
B6NZOF1 f 4.6075 1.1488 6.9198 2.2952
B6NZOF1 m 7.14 1.6246 10.4101 3.8699
CASTPWKF1 f 4.882 1.0275 6.9502 2.8138
CASTPWKF1 m 6.33 0.938 8.218 4.442
NODCASTF1 f 4.144 1.0275 6.2122 2.0758
NODCASTF1 m 2.24 1.6246 5.5101 0.0
NODNZOF1 f 5.485 1.6246 8.7551 2.2149
NODNZOF1 m 5.39 1.3265 8.0601 2.7199
PWKAF1 f 9.845 1.6246 13.1151 6.5749
PWKAF1 m 7.0 1.6246 10.2701 3.7299
WSBB6F1 f 2.785 1.6246 6.0551 0.0
WSBB6F1 m 4.1333 1.3265 6.8034 1.4633
WSBNZOF1 f 5.67 0.938 7.558 3.782
WSBNZOF1 m 5.48 1.6246 8.7501 2.2099


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129SAF1 both 6.6275 1.0487 8.7384 4.5166
129SB6F1 both 3.9663 0.8774 5.7323 2.2002
129SWSBF1 both 4.2913 0.9949 6.2938 2.2887
B6NODF1 both 2.7475 1.1488 5.0598 0.4352
B6NZOF1 both 5.8738 0.9949 7.8763 3.8712
CASTPWKF1 both 5.606 0.6956 7.0062 4.2058
NODCASTF1 both 3.192 0.9611 5.1266 1.2574
NODNZOF1 both 5.4375 1.0487 7.5484 3.3266
PWKAF1 both 8.4225 1.1488 10.7348 6.1102
WSBB6F1 both 3.4592 1.0487 5.57 1.3483
WSBNZOF1 both 5.575 0.938 7.463 3.687




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA