Phenotype measure:   Chesler2   transitions_OFT


  STRAIN COMPARISON PLOT
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Chesler2 - number of transitions between center and periphery, 10 min test



  8-WAY DIALLEL CROSS VIEW
Female animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ 10.0 39.5 107 64.0 90.0 33.0 93.0 88.0
A ♀ 129 82.0 52.0
B6 ♀ 76.5 122 62.5 70.8 130
CAST ♀ 61.0 131 50.0 55.6 56.0
NOD ♀ 78.0 70.0 131 112 100 126
NZO ♀ 68.5 38.3 65.0 59.0
PWK ♀ 33.0 45.0 101
WSB ♀ 74.7 41.0 112 128 74.7 64.5 110

Male animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ 77.7 90.5 89.0 52.5 58.0 116 60.5
A ♀ 82.3 54.0 82.4 85.0 68.0
B6 ♀ 90.5 108 68.0 74.0
CAST ♀ 90.0 63.0 97.3 76.0 57.0 45.0 71.0
NOD ♀ 71.5 91.0 128 92.5 58.3
NZO ♀ 41.0 142 71.0
PWK ♀ 49.0 95.5 108
WSB ♀ 70.0 85.3 66.5 41.0 93.0

Cell coloring is based on strain mean Z-scores.     High-end         Mid         Low-end           Mouse over the cells to see additional info.


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested41 strains39 strains
Mean of the strain means78.9   n 78.4   n
Median of the strain means74.7   n 76.0   n
SD of the strain means± 32.3 ± 23.0
Coefficient of variation (CV)0.409 0.293
Min–max range of strain means10.0   –   131   n 41.0   –   142   n
Mean sample size per strain2.1   mice 2.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1714.2285 1714.2285 1.9404 0.1703
strain 10 23517.1164 2351.7116 2.662 0.0118
sex:strain 10 6779.6903 677.969 0.7674 0.6587
Residuals 46 40637.95 883.4337


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 10.0 0.0   1   0.0 0.0 10.0, 10.0 -2.14
129SAF1 f 39.5 44.5   2   31.5 1.13 8.0, 71.0 -1.22
129SAF1 m 77.7 30.1   3 17.4 0.388 44.0, 102.0 -0.03
129SB6F1 f 107.0 57.5   3 33.2 0.535 42.0, 150.0 0.87
129SB6F1 m 90.5 36.8   4 18.4 0.407 41.0, 126.0 0.52
129SCASTF1 f 64.0 42.4   2   30.0 0.663 34.0, 94.0 -0.46
129SCASTF1 m 89.0 0.0   1   0.0 0.0 89.0, 89.0 0.46
129SNODF1 f 90.0 0.0   1   0.0 0.0 90.0, 90.0 0.34
129SNODF1 m 52.5 0.707   2   0.5 0.0135 52.0, 53.0 -1.13
129SNZOF1 f 33.0 0.0   1   0.0 0.0 33.0, 33.0 -1.42
129SNZOF1 m 58.0 39.0   3 22.5 0.672 16.0, 93.0 -0.89
129SPWKF1 f 93.0 26.4   4 13.2 0.284 65.0, 128.0 0.44
129SPWKF1 m 116.0 0.0   1   0.0 0.0 116.0, 116.0 1.64
129SWSBF1 f 88.0 12.7   4 6.35 0.144 75.0, 105.0 0.28
129SWSBF1 m 60.5 0.707   2   0.5 0.0117 60.0, 61.0 -0.78
AB6F1 f 129.0 0.0   1   0.0 0.0 129.0, 129.0 1.55
AB6F1 m 82.3 33.0   3 19.1 0.401 50.0, 116.0 0.17
ACASTF1 m 54.0 0.0   1   0.0 0.0 54.0, 54.0 -1.06
ANODF1 m 82.4 18.6   5 8.32 0.226 68.0, 114.0 0.17
ANZOF1 f 82.0 90.5   2   64.0 1.1 18.0, 146.0 0.1
APWKF1 f 52.0 0.0   1   0.0 0.0 52.0, 52.0 -0.83
APWKF1 m 85.0 0.0   1   0.0 0.0 85.0, 85.0 0.29
AWSBF1 m 68.0 0.0   1   0.0 0.0 68.0, 68.0 -0.45
B6129SF1/J f 76.5 12.0   2   8.5 0.157 68.0, 85.0 -0.07
B6AF1/J f 122.0 0.0   1   0.0 0.0 122.0, 122.0 1.34
B6AF1/J m 90.5 21.9   2   15.5 0.242 75.0, 106.0 0.52
B6CASTF1 m 108.0 3.54   2   2.5 0.0329 105.0, 110.0 1.29
B6NODF1 f 62.5 67.2   2   47.5 1.07 15.0, 110.0 -0.51
B6NODF1 m 68.0 72.1   2   51.0 1.06 17.0, 119.0 -0.45
B6NZOF1 f 70.8 23.3   4 11.7 0.33 44.0, 100.0 -0.25
B6NZOF1 m 74.0 26.9   2   19.0 0.363 55.0, 93.0 -0.19
B6PWKF1 f 130.0 16.3   2   11.5 0.126 118.0, 141.0 1.58
CAST129SF1 m 90.0 4.0   3 2.31 0.0444 86.0, 94.0 0.5
CASTAF1 f 61.0 0.0   1   0.0 0.0 61.0, 61.0 -0.55
CASTAF1 m 63.0 17.0   2   12.0 0.269 51.0, 75.0 -0.67
CASTB6F1 f 131.0 0.0   1   0.0 0.0 131.0, 131.0 1.62
CASTB6F1 m 97.3 11.0   3 6.36 0.113 90.0, 110.0 0.82
CASTNODF1 m 76.0 15.6   3 9.02 0.206 58.0, 86.0 -0.11
CASTNZOF1 f 50.0 14.7   3 8.5 0.295 37.0, 66.0 -0.9
CASTNZOF1 m 57.0 0.0   1   0.0 0.0 57.0, 57.0 -0.93
CASTPWKF1 f 55.6 12.3   5 5.52 0.222 36.0, 66.0 -0.72
CASTPWKF1 m 45.0 10.1   6 4.13 0.225 35.0, 64.0 -1.46
CASTWSBF1 f 56.0 25.5   2   18.0 0.455 38.0, 74.0 -0.71
CASTWSBF1 m 71.0 0.0   1   0.0 0.0 71.0, 71.0 -0.32
NOD129SF1 f 78.0 0.0   1   0.0 0.0 78.0, 78.0 -0.03
NOD129SF1 m 71.5 7.78   2   5.5 0.109 66.0, 77.0 -0.3
NODAF1 f 70.0 0.0   1   0.0 0.0 70.0, 70.0 -0.28
NODAF1 m 91.0 0.0   1   0.0 0.0 91.0, 91.0 0.55
NODB6F1 f 131.0 0.0   1   0.0 0.0 131.0, 131.0 1.62
NODB6F1 m 128.0 31.8   2   22.5 0.248 106.0, 151.0 2.16
NODCASTF1 f 112.0 23.2   5 10.4 0.207 89.0, 150.0 1.03
NODCASTF1 m 92.5 9.19   2   6.5 0.0994 86.0, 99.0 0.61
NODNZOF1 f 100.0 7.78   2   5.5 0.0774 95.0, 106.0 0.65
NODNZOF1 m 58.3 36.5   3 21.1 0.625 18.0, 89.0 -0.88
NODPWKF1 f 126.0 0.0   1   0.0 0.0 126.0, 126.0 1.46
NZO129SF1 f 68.5 36.1   2   25.5 0.526 43.0, 94.0 -0.32
NZO129SF1 m 41.0 0.0   1   0.0 0.0 41.0, 41.0 -1.63
NZOAF1 f 38.3 15.2   3 8.76 0.396 22.0, 52.0 -1.26
NZOB6F1 m 142.0 0.0   1   0.0 0.0 142.0, 142.0 2.77
NZONODF1 f 65.0 0.0   1   0.0 0.0 65.0, 65.0 -0.43
NZONODF1 m 71.0 15.6   2   11.0 0.219 60.0, 82.0 -0.32
NZOWSBF1 f 59.0 16.5   3 9.54 0.28 40.0, 70.0 -0.62
PWK129SF1 f 33.0 15.4   4 7.71 0.467 17.0, 54.0 -1.42
PWKAF1 f 45.0 5.66   2   4.0 0.126 41.0, 49.0 -1.05
PWKAF1 m 49.0 0.0   2   0.0 0.0 49.0, 49.0 -1.28
PWKB6F1 m 95.5 12.0   2   8.5 0.126 87.0, 104.0 0.74
PWKNODF1 f 101.0 0.0   1   0.0 0.0 101.0, 101.0 0.69
PWKNODF1 m 108.0 30.4   2   21.5 0.283 86.0, 129.0 1.29
WSB129SF1 f 74.7 36.1   3 20.8 0.483 33.0, 96.0 -0.13
WSBAF1 f 41.0 0.0   1   0.0 0.0 41.0, 41.0 -1.17
WSBAF1 m 70.0 4.24   2   3.0 0.0606 67.0, 73.0 -0.37
WSBB6F1 f 112.0 37.5   2   26.5 0.333 86.0, 139.0 1.03
WSBB6F1 m 85.3 21.0   3 12.1 0.246 65.0, 107.0 0.3
WSBCASTF1 m 66.5 24.9   4 12.5 0.375 43.0, 96.0 -0.52
WSB/EiJ f 110.0 33.2   2   23.5 0.301 87.0, 134.0 0.96
WSBNODF1 f 128.0 0.0   1   0.0 0.0 128.0, 128.0 1.52
WSBNODF1 m 41.0 22.6   2   16.0 0.552 25.0, 57.0 -1.63
WSBNZOF1 f 74.7 30.0   6 12.2 0.401 44.0, 129.0 -0.13
WSBNZOF1 m 93.0 26.9   2   19.0 0.289 74.0, 112.0 0.63
WSBPWKF1 f 64.5 3.54   2   2.5 0.0548 62.0, 67.0 -0.45


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129SAF1 f 39.5 21.0171 81.8051 0.0
129SAF1 m 77.6667 17.1604 112.2087 43.1247
129SB6F1 f 107.3333 17.1604 141.8753 72.7913
129SB6F1 m 90.5 14.8613 120.4143 60.5857
129SWSBF1 f 88.0 14.8613 117.9143 58.0857
129SWSBF1 m 60.5 21.0171 102.8051 18.1949
B6NODF1 f 62.5 21.0171 104.8051 20.1949
B6NODF1 m 68.0 21.0171 110.3051 25.6949
B6NZOF1 f 70.75 14.8613 100.6643 40.8357
B6NZOF1 m 74.0 21.0171 116.3051 31.6949
CASTPWKF1 f 55.6 13.2924 82.3561 28.8439
CASTPWKF1 m 45.0 12.1342 69.4249 20.5751
NODCASTF1 f 112.0 13.2924 138.7561 85.2439
NODCASTF1 m 92.5 21.0171 134.8051 50.1949
NODNZOF1 f 100.5 21.0171 142.8051 58.1949
NODNZOF1 m 58.3333 17.1604 92.8753 23.7913
PWKAF1 f 45.0 21.0171 87.3051 2.6949
PWKAF1 m 49.0 21.0171 91.3051 6.6949
WSBB6F1 f 112.5 21.0171 154.8051 70.1949
WSBB6F1 m 85.3333 17.1604 119.8753 50.7913
WSBNZOF1 f 74.6667 12.1342 99.0916 50.2418
WSBNZOF1 m 93.0 21.0171 135.3051 50.6949


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129SAF1 both 58.5833 13.5665 85.8912 31.2755
129SB6F1 both 98.9167 11.3505 121.7641 76.0693
129SWSBF1 both 74.25 12.8703 100.1565 48.3435
B6NODF1 both 65.25 14.8613 95.1643 35.3357
B6NZOF1 both 72.375 12.8703 98.2815 46.4685
CASTPWKF1 both 50.3 8.999 68.414 32.186
NODCASTF1 both 102.25 12.4339 127.2781 77.2219
NODNZOF1 both 79.4167 13.5665 106.7245 52.1088
PWKAF1 both 47.0 14.8613 76.9143 17.0857
WSBB6F1 both 98.9167 13.5665 126.2245 71.6088
WSBNZOF1 both 83.8333 12.1342 108.2582 59.4084




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA