Phenotype measure:   Chesler2   pct_LYM

ID, description, units MPD:43415   pct_LYM   lymphocyte differential (LYM; percentage of viable WBC)   [%]
Data set, strains Chesler2   CC diallel w/par   38 strains     sex: both     age: 7-15wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Chesler2 - lymphocyte differential (LYM; percentage of viable WBC)



  8-WAY DIALLEL CROSS VIEW
Female animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ 58.9 38.7 49.7 38.7 56.0
A ♀ 42.7 48.5 50.2
B6 ♀ 44.2 42.4 61.8 54.4 44.9 56.2
CAST ♀ 46.6 45.6 54.4 52.1 58.7 45.6
NOD ♀ 47.2 45.0 41.7 39.9
NZO ♀ 40.6 41.2 42.7
PWK ♀ 55.3 45.8 37.5 50.0
WSB ♀ 55.1 53.0 47.2 59.5 50.6 61.8 52.0

Male animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ 49.7 43.9 56.0 38.0 42.3
A ♀ 44.9 50.2 43.9 58.2 39.3
B6 ♀ 52.8 61.5 40.3 47.9
CAST ♀ 45.9 44.4 53.4 53.8 42.0 53.8 57.9
NOD ♀ 41.3 44.2
NZO ♀ 48.7 43.9
PWK ♀ 61.0 46.1
WSB ♀ 41.2 46.6 46.6 46.0 50.0 44.6

Cell coloring is based on strain mean Z-scores.     High-end         Mid         Low-end           Mouse over the cells to see additional info.


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested38 strains33 strains
Mean of the strain means48.9   % 47.9   %
Median of the strain means47.9   % 46.1   %
SD of the strain means± 6.86 ± 6.27
Coefficient of variation (CV)0.140 0.131
Min–max range of strain means37.5   –   61.8   % 38.0   –   61.5   %
Mean sample size per strain1.9   mice 2.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 10.8399 10.8399 0.2258 0.6357
strain 10 6177.313 617.7313 12.8697 < 0.0001
sex:strain 10 168.915 16.8915 0.3519 0.9638
Residuals 100 4799.8817 47.9988


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 58.9 0.354   2   0.25 0.00601 58.6, 59.1 1.46
129S1/SvImJ m 49.7 8.06   2   5.7 0.162 44.0, 55.4 0.29
129SAF1 f 38.7 0.0   1   0.0 0.0 38.7, 38.7 -1.48
129SAF1 m 43.9 0.0   1   0.0 0.0 43.9, 43.9 -0.64
129SB6F1 f 49.7 3.11   2   2.2 0.0626 47.5, 51.9 0.12
129SB6F1 m 56.0 0.354   2   0.25 0.00632 55.7, 56.2 1.29
129SCASTF1 f 38.7 9.12   2   6.45 0.236 32.2, 45.1 -1.48
129SNODF1 m 38.0 1.91   2   1.35 0.0502 36.7, 39.4 -1.58
129SNZOF1 m 42.3 0.99   2   0.7 0.0234 41.6, 43.0 -0.89
129SPWKF1 f 56.0 0.0   1   0.0 0.0 56.0, 56.0 1.04
AB6F1 f 48.5 0.0   1   0.0 0.0 48.5, 48.5 -0.05
AB6F1 m 50.2 3.04   4 1.52 0.0607 46.7, 53.9 0.37
A/J f 42.7 3.39   2   2.4 0.0795 40.3, 45.1 -0.9
A/J m 44.9 5.7   6 2.33 0.127 38.5, 54.5 -0.48
ANODF1 m 43.9 3.84   7 1.45 0.0874 39.3, 49.3 -0.64
ANZOF1 f 50.2 0.0   1   0.0 0.0 50.2, 50.2 0.2
APWKF1 m 58.2 0.0   1   0.0 0.0 58.2, 58.2 1.64
AWSBF1 m 39.3 0.0   1   0.0 0.0 39.3, 39.3 -1.37
B6129SF1/J f 44.2 3.46   2   2.45 0.0783 41.8, 46.7 -0.68
B6AF1/J f 42.4 0.0   1   0.0 0.0 42.4, 42.4 -0.94
B6AF1/J m 52.8 0.0   1   0.0 0.0 52.8, 52.8 0.78
B6NODF1 f 54.4 0.0   1   0.0 0.0 54.4, 54.4 0.81
B6NODF1 m 40.3 1.7   2   1.2 0.0421 39.1, 41.5 -1.21
B6NZOF1 f 44.9 0.0   1   0.0 0.0 44.9, 44.9 -0.58
B6NZOF1 m 47.9 0.0   1   0.0 0.0 47.9, 47.9 0.0
B6PWKF1 f 56.2 0.0   1   0.0 0.0 56.2, 56.2 1.07
C57BL/6J f 61.8 6.82   20 1.52 0.11 49.2, 71.6 1.89
C57BL/6J m 61.5 7.03   37 1.16 0.114 46.8, 72.1 2.17
CAST129SF1 m 45.9 2.12   2   1.5 0.0462 44.4, 47.4 -0.32
CASTAF1 f 46.6 0.0   1   0.0 0.0 46.6, 46.6 -0.33
CASTAF1 m 44.4 5.37   2   3.8 0.121 40.6, 48.2 -0.56
CASTB6F1 f 45.6 0.0   1   0.0 0.0 45.6, 45.6 -0.47
CASTB6F1 m 53.4 7.75   3 4.47 0.145 45.2, 60.6 0.88
CAST/EiJ f 54.4 6.66   5 2.98 0.123 48.0, 65.4 0.81
CAST/EiJ m 53.8 2.9   2   2.05 0.0538 51.8, 55.9 0.94
CASTNODF1 m 42.0 0.0   1   0.0 0.0 42.0, 42.0 -0.94
CASTNZOF1 f 52.1 7.74   4 3.87 0.149 45.9, 63.4 0.47
CASTNZOF1 m 53.8 0.0   1   0.0 0.0 53.8, 53.8 0.94
CASTPWKF1 f 58.7 4.75   5 2.12 0.0809 51.0, 62.9 1.44
CASTPWKF1 m 57.9 8.49   6 3.46 0.147 48.7, 69.5 1.6
CASTWSBF1 f 45.6 8.27   2   5.85 0.181 39.8, 51.5 -0.47
NODAF1 f 47.2 0.0   1   0.0 0.0 47.2, 47.2 -0.24
NODB6F1 f 45.0 4.35   3 2.51 0.0967 40.8, 49.5 -0.56
NODNZOF1 f 39.9 3.39   2   2.4 0.0851 37.5, 42.3 -1.3
NODNZOF1 m 44.2 11.9   2   8.4 0.269 35.8, 52.6 -0.59
NOD/ShiLtJ f 41.7 4.05   3 2.34 0.0969 38.6, 46.3 -1.04
NOD/ShiLtJ m 41.3 5.26   3 3.04 0.127 38.0, 47.4 -1.05
NZO129SF1 f 40.6 0.0   1   0.0 0.0 40.6, 40.6 -1.2
NZOAF1 f 41.2 0.0   1   0.0 0.0 41.2, 41.2 -1.12
NZOB6F1 m 48.7 0.0   1   0.0 0.0 48.7, 48.7 0.13
NZO/HlLtJ m 43.9 0.0   1   0.0 0.0 43.9, 43.9 -0.64
NZOWSBF1 f 42.7 17.9   3 10.4 0.421 22.8, 57.7 -0.9
PWK129SF1 f 55.3 0.0   1   0.0 0.0 55.3, 55.3 0.94
PWKAF1 f 45.8 0.0   1   0.0 0.0 45.8, 45.8 -0.44
PWKAF1 m 61.0 0.0   1   0.0 0.0 61.0, 61.0 2.09
PWKNODF1 f 37.5 0.0   1   0.0 0.0 37.5, 37.5 -1.65
PWK/PhJ f 50.0 0.636   2   0.45 0.0127 49.5, 50.4 0.17
PWK/PhJ m 46.1 11.3   4 5.66 0.245 30.1, 55.6 -0.29
WSB129SF1 f 55.1 0.0   1   0.0 0.0 55.1, 55.1 0.91
WSBAF1 f 53.0 0.0   1   0.0 0.0 53.0, 53.0 0.6
WSBAF1 m 41.2 5.3   2   3.75 0.129 37.5, 45.0 -1.07
WSBB6F1 f 47.2 4.88   2   3.45 0.103 43.8, 50.7 -0.24
WSBB6F1 m 46.6 4.14   3 2.39 0.0888 41.9, 49.7 -0.21
WSBCASTF1 m 46.6 4.42   3 2.55 0.0948 43.9, 51.7 -0.21
WSB/EiJ f 52.0 4.67   2   3.3 0.0897 48.7, 55.3 0.46
WSB/EiJ m 44.6 0.0   1   0.0 0.0 44.6, 44.6 -0.52
WSBNODF1 f 59.5 0.0   1   0.0 0.0 59.5, 59.5 1.55
WSBNODF1 m 46.0 2.83   2   2.0 0.0615 44.0, 48.0 -0.3
WSBNZOF1 f 50.6 7.51   6 3.07 0.148 39.0, 58.4 0.25
WSBNZOF1 m 50.0 9.72   4 4.86 0.194 36.4, 59.4 0.34
WSBPWKF1 f 61.8 1.34   2   0.95 0.0217 60.9, 62.8 1.89


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 58.85 4.8989 68.5693 49.1307
129S1/SvImJ m 49.7 4.8989 59.4193 39.9807
129SB6F1 f 49.7 4.8989 59.4193 39.9807
129SB6F1 m 55.95 4.8989 65.6693 46.2307
A/J f 42.7 4.8989 52.4193 32.9807
A/J m 44.85 2.8284 50.4614 39.2386
C57BL/6J f 61.765 1.5492 64.8385 58.6915
C57BL/6J m 61.5405 1.139 63.8002 59.2808
CAST/EiJ f 54.36 3.0983 60.507 48.213
CAST/EiJ m 53.85 4.8989 63.5693 44.1307
CASTPWKF1 f 58.7 3.0983 64.847 52.553
CASTPWKF1 m 57.8667 2.8284 63.4781 52.2552
NODNZOF1 f 39.9 4.8989 49.6193 30.1807
NODNZOF1 m 44.2 4.8989 53.9193 34.4807
NOD/ShiLtJ f 41.7333 4.0 49.6691 33.7975
NOD/ShiLtJ m 41.3333 4.0 49.2691 33.3975
PWK/PhJ f 49.95 4.8989 59.6693 40.2307
PWK/PhJ m 46.15 3.4641 53.0226 39.2774
WSBB6F1 f 47.25 4.8989 56.9693 37.5307
WSBB6F1 m 46.6 4.0 54.5358 38.6642
WSBNZOF1 f 50.5833 2.8284 56.1948 44.9719
WSBNZOF1 m 50.05 3.4641 56.9226 43.1774


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 54.275 3.4641 61.1476 47.4024
129SB6F1 both 52.825 3.4641 59.6976 45.9524
A/J both 43.775 2.8284 49.3864 38.1636
C57BL/6J both 61.6528 0.9614 63.5602 59.7454
CAST/EiJ both 54.105 2.8982 59.855 48.355
CASTPWKF1 both 58.2833 2.0976 62.4449 54.1218
NODNZOF1 both 42.05 3.4641 48.9226 35.1774
NOD/ShiLtJ both 41.5333 2.8284 47.1448 35.9219
PWK/PhJ both 48.05 3.0 54.0018 42.0982
WSBB6F1 both 46.925 3.1622 53.1988 40.6512
WSBNZOF1 both 50.3167 2.236 54.7529 45.8804




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CKB, or AXBBXA