Project measure / variable:   Chesler2   calcium

ID, description, units MPD:43404   calcium   calcium (blood ionized Ca)   [mmol/L]  
Data set, strains Chesler2   CC diallel w/par   48 strains     sex: both     age: 7-15wks
Procedure metabolic panel
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  STRAIN COMPARISON PLOT
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Chesler2 - calcium (blood ionized Ca)



  8-WAY DIALLEL CROSS VIEW
Female animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ — 1.16 1.23 1.29 — — 1.31 —
A ♀ — — 1.26 — — 1.22 — —
B6 ♀ 1.02 1.24 1.21 — 1.31 1.18 1.23 —
CAST ♀ — 1.07 1.14 1.13 — 1.21 1.21 1.12
NOD ♀ — 1.24 1.21 — 1.21 1.27 — —
NZO ♀ 1.21 1.17 — — — — — 1.19
PWK ♀ 1.30 1.08 — — 1.21 — — —
WSB ♀ 1.24 1.20 1.26 — 1.21 1.23 1.24 1.19

Male animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ — 1.21 1.27 — 1.19 1.20 — —
A ♀ — 1.12 1.17 — 1.17 — 1.15 1.19
B6 ♀ — 1.17 1.18 — 1.27 1.21 — —
CAST ♀ 1.19 1.15 1.19 1.17 1.17 1.26 1.12 —
NOD ♀ — — — — 1.13 1.23 — —
NZO ♀ — — 1.28 — 1.23 1.17 — —
PWK ♀ — 1.18 — — — — 1.17 —
WSB ♀ — 1.19 1.17 1.17 1.20 1.25 — 1.17

Cell coloring is based on strain mean Z-scores.     High-end         Mid         Low-end           Mouse over the cells to see additional info.


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested35 strains33 strains
Mean of the strain means1.21   mmol/L 1.19   mmol/L
Median of the strain means1.21   mmol/L 1.18   mmol/L
SD of the strain means± 0.0654 ± 0.0412
Coefficient of variation (CV)0.0542 0.0346
Min–max range of strain means1.02   –   1.31   mmol/L 1.12   –   1.28   mmol/L
Mean sample size per strain1.8   mice 2.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0159 0.0159 6.5294 0.0127
strain 6 0.0742 0.0124 5.0812 0.0002
sex:strain 6 0.0312 0.0052 2.1341 0.0593
Residuals 74 0.1801 0.0024


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129SAF1 f 1.16 0.0   1   0.0 0.0 1.16, 1.16 -0.7
129SAF1 m 1.21 0.0566   2   0.04 0.0468 1.17, 1.25 0.47
129SB6F1 f 1.23 0.0778   2   0.055 0.0635 1.17, 1.28 0.37
129SB6F1 m 1.27 0.0141   2   0.01 0.0111 1.26, 1.28 1.93
129SCASTF1 f 1.29 0.0212   2   0.015 0.0164 1.28, 1.31 1.29
129SNODF1 m 1.19 0.0354   2   0.025 0.0296 1.17, 1.22 -0.01
129SNZOF1 m 1.2 0.12   2   0.085 0.101 1.11, 1.28 0.23
129SPWKF1 f 1.31 0.0   1   0.0 0.0 1.31, 1.31 1.6
AB6F1 f 1.26 0.0   1   0.0 0.0 1.26, 1.26 0.83
AB6F1 m 1.17 0.0387   4 0.0194 0.033 1.13, 1.22 -0.5
A/J m 1.12 0.033   4 0.0165 0.0296 1.08, 1.16 -1.71
ANODF1 m 1.17 0.0713   7 0.0269 0.0608 1.11, 1.3 -0.5
ANZOF1 f 1.22 0.0   1   0.0 0.0 1.22, 1.22 0.22
APWKF1 m 1.15 0.0   1   0.0 0.0 1.15, 1.15 -0.98
AWSBF1 m 1.19 0.0   1   0.0 0.0 1.19, 1.19 -0.01
B6129SF1/J f 1.02 0.318   2   0.225 0.313 0.79, 1.24 -2.84
B6AF1/J f 1.24 0.0   1   0.0 0.0 1.24, 1.24 0.52
B6AF1/J m 1.17 0.0   1   0.0 0.0 1.17, 1.17 -0.5
B6NODF1 f 1.31 0.0   1   0.0 0.0 1.31, 1.31 1.6
B6NODF1 m 1.27 0.0636   2   0.045 0.0503 1.22, 1.31 1.93
B6NZOF1 f 1.18 0.0   1   0.0 0.0 1.18, 1.18 -0.39
B6NZOF1 m 1.21 0.0   1   0.0 0.0 1.21, 1.21 0.47
B6PWKF1 f 1.23 0.0   1   0.0 0.0 1.23, 1.23 0.37
C57BL/6J f 1.21 0.0486   15 0.0126 0.0401 1.12, 1.32 0.07
C57BL/6J m 1.18 0.0327   33 0.00569 0.0278 1.11, 1.24 -0.26
CAST129SF1 m 1.19 0.0354   2   0.025 0.0296 1.17, 1.22 -0.01
CASTAF1 f 1.07 0.0   1   0.0 0.0 1.07, 1.07 -2.08
CASTAF1 m 1.15 0.00707   2   0.005 0.00618 1.14, 1.15 -0.98
CASTB6F1 f 1.14 0.0   1   0.0 0.0 1.14, 1.14 -1.01
CASTB6F1 m 1.19 0.0306   3 0.0176 0.0257 1.16, 1.22 -0.01
CAST/EiJ f 1.13 0.06   5 0.0268 0.0531 1.07, 1.23 -1.16
CAST/EiJ m 1.17 0.0424   2   0.03 0.0363 1.14, 1.2 -0.5
CASTNODF1 m 1.17 0.0   1   0.0 0.0 1.17, 1.17 -0.5
CASTNZOF1 f 1.21 0.0497   4 0.0248 0.041 1.15, 1.27 0.07
CASTNZOF1 m 1.26 0.0   1   0.0 0.0 1.26, 1.26 1.68
CASTPWKF1 f 1.21 0.076   5 0.034 0.0626 1.11, 1.28 0.07
CASTPWKF1 m 1.12 0.0376   6 0.0154 0.0337 1.09, 1.19 -1.71
CASTWSBF1 f 1.12 0.0212   2   0.015 0.0189 1.11, 1.14 -1.31
NODAF1 f 1.24 0.0   1   0.0 0.0 1.24, 1.24 0.52
NODB6F1 f 1.21 0.03   3 0.0173 0.0248 1.18, 1.24 0.07
NODNZOF1 f 1.27 0.00707   2   0.005 0.00559 1.26, 1.27 0.98
NODNZOF1 m 1.23 0.00707   2   0.005 0.00577 1.22, 1.23 0.96
NOD/ShiLtJ f 1.21 0.0   1   0.0 0.0 1.21, 1.21 0.07
NOD/ShiLtJ m 1.13 0.0   1   0.0 0.0 1.13, 1.13 -1.47
NZO129SF1 f 1.21 0.0   1   0.0 0.0 1.21, 1.21 0.07
NZOAF1 f 1.17 0.0   1   0.0 0.0 1.17, 1.17 -0.55
NZOB6F1 m 1.28 0.0   1   0.0 0.0 1.28, 1.28 2.17
NZO/HlLtJ m 1.17 0.0   1   0.0 0.0 1.17, 1.17 -0.5
NZONODF1 m 1.23 0.0   1   0.0 0.0 1.23, 1.23 0.96
NZOWSBF1 f 1.19 0.0666   3 0.0384 0.0558 1.12, 1.25 -0.24
PWK129SF1 f 1.3 0.0   1   0.0 0.0 1.3, 1.3 1.44
PWKAF1 f 1.08 0.0   1   0.0 0.0 1.08, 1.08 -1.92
PWKAF1 m 1.18 0.0   1   0.0 0.0 1.18, 1.18 -0.26
PWKNODF1 f 1.21 0.0   1   0.0 0.0 1.21, 1.21 0.07
PWK/PhJ m 1.17 0.0778   2   0.055 0.0668 1.11, 1.22 -0.5
WSB129SF1 f 1.24 0.0   1   0.0 0.0 1.24, 1.24 0.52
WSBAF1 f 1.2 0.0   1   0.0 0.0 1.2, 1.2 -0.09
WSBAF1 m 1.19 0.00707   2   0.005 0.00597 1.18, 1.19 -0.01
WSBB6F1 f 1.26 0.0   1   0.0 0.0 1.26, 1.26 0.83
WSBB6F1 m 1.17 0.0493   3 0.0285 0.0423 1.11, 1.2 -0.5
WSBCASTF1 m 1.17 0.0862   3 0.0498 0.0735 1.08, 1.25 -0.5
WSB/EiJ f 1.19 0.0141   2   0.01 0.0119 1.18, 1.2 -0.24
WSB/EiJ m 1.17 0.0424   2   0.03 0.0363 1.14, 1.2 -0.5
WSBNODF1 f 1.21 0.0   1   0.0 0.0 1.21, 1.21 0.07
WSBNODF1 m 1.2 0.099   2   0.07 0.0825 1.13, 1.27 0.23
WSBNZOF1 f 1.23 0.102   6 0.0416 0.0828 1.12, 1.34 0.37
WSBNZOF1 m 1.25 0.0455   4 0.0227 0.0364 1.19, 1.3 1.44
WSBPWKF1 f 1.24 0.099   2   0.07 0.0798 1.17, 1.31 0.52


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129SB6F1 f 1.225 0.0349 1.2945 1.1555
129SB6F1 m 1.27 0.0349 1.3395 1.2005
C57BL/6J f 1.2133 0.0127 1.2387 1.188
C57BL/6J m 1.1755 0.0086 1.1926 1.1583
CAST/EiJ f 1.13 0.0221 1.174 1.086
CAST/EiJ m 1.17 0.0349 1.2395 1.1005
CASTPWKF1 f 1.214 0.0221 1.258 1.17
CASTPWKF1 m 1.1183 0.0201 1.1585 1.0782
NODNZOF1 f 1.265 0.0349 1.3345 1.1955
NODNZOF1 m 1.225 0.0349 1.2945 1.1555
WSB/EiJ f 1.19 0.0349 1.2595 1.1205
WSB/EiJ m 1.17 0.0349 1.2395 1.1005
WSBNZOF1 f 1.23 0.0201 1.2701 1.1899
WSBNZOF1 m 1.25 0.0247 1.2992 1.2008


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129SB6F1 both 1.2475 0.0247 1.2967 1.1983
C57BL/6J both 1.1944 0.0077 1.2097 1.1791
CAST/EiJ both 1.15 0.0206 1.1911 1.1089
CASTPWKF1 both 1.1662 0.0149 1.1959 1.1364
NODNZOF1 both 1.245 0.0247 1.2942 1.1958
WSB/EiJ both 1.18 0.0247 1.2292 1.1308
WSBNZOF1 both 1.24 0.0159 1.2717 1.2083




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA