Project measure / variable:   Donahue9   phosphorus

ID, description, units MPD:41805   phosphorus   phosphorus (serum P)   [mg/dL]  
Data set, strains Donahue9   B6.PWD consomic w/par   25 strains     sex: both     age: 11wks
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  STRAIN COMPARISON PLOT
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Donahue9 - phosphorus (serum P)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains25 strains
Mean of the strain means10.3   mg/dL 9.75   mg/dL
Median of the strain means10.2   mg/dL 9.84   mg/dL
SD of the strain means± 0.581 ± 0.838
Coefficient of variation (CV)0.0564 0.0859
Min–max range of strain means8.99   –   11.7   mg/dL 7.90   –   11.5   mg/dL
Mean sample size per strain8.3   mice 8.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 30.6038 30.6038 25.7339 < 0.0001
strain 22 139.8899 6.3586 5.3468 < 0.0001
sex:strain 22 42.7303 1.9423 1.6332 0.0375
Residuals 334 397.2058 1.1892


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 9.85 0.854   8 0.302 0.0867 8.5, 10.8 -0.78
B6.PWD-Chr1 m 9.1 0.55   8 0.195 0.0605 8.5, 9.8 -0.78
B6.PWD-Chr10.1 f 10.6 0.873   8 0.309 0.0826 9.8, 12.4 0.52
B6.PWD-Chr10.1 m 9.94 1.18   8 0.418 0.119 8.7, 12.3 0.23
B6.PWD-Chr10.2 f 10.2 0.747   11 0.225 0.0736 8.9, 11.2 -0.17
B6.PWD-Chr10.2 m 9.21 0.927   10 0.293 0.101 8.2, 11.0 -0.65
B6.PWD-Chr10.3 f 10.3 0.819   8 0.29 0.0796 9.2, 11.5 0.0
B6.PWD-Chr10.3 m 10.2 0.487   8 0.172 0.048 9.5, 10.9 0.54
B6.PWD-Chr11.1 f 11.0 0.858   12 0.248 0.078 9.6, 12.3 1.2
B6.PWD-Chr11.1 m 10.7 0.752   12 0.217 0.0705 9.6, 12.1 1.13
B6.PWD-Chr11.2 f 8.99 1.34   10 0.425 0.15 7.5, 11.6 -2.26
B6.PWD-Chr11.2 m 9.05 1.3   10 0.411 0.144 6.9, 11.4 -0.84
B6.PWD-Chr11.3 f 10.2 0.786   10 0.249 0.0768 8.9, 11.4 -0.17
B6.PWD-Chr11.3 m 9.81 0.364   8 0.129 0.0371 9.3, 10.4 0.07
B6.PWD-Chr12 f 10.2 2.19   8 0.774 0.215 6.0, 12.2 -0.17
B6.PWD-Chr12 m 10.1 1.04   8 0.369 0.104 8.6, 11.3 0.42
B6.PWD-Chr14 f 10.1 1.02   9 0.34 0.101 8.7, 11.9 -0.35
B6.PWD-Chr14 m 10.4 1.26   9 0.419 0.121 8.3, 12.0 0.77
B6.PWD-Chr15 f 10.1 0.872   8 0.308 0.0865 8.4, 10.9 -0.35
B6.PWD-Chr15 m 9.86 0.823   8 0.291 0.0834 8.9, 11.1 0.13
B6.PWD-Chr16 f 10.5 1.03   10 0.327 0.0989 8.6, 12.3 0.34
B6.PWD-Chr16 m 9.55 1.53   6 0.623 0.16 7.8, 12.2 -0.24
B6.PWD-Chr17 f 10.4 0.65   8 0.23 0.0622 9.1, 11.1 0.17
B6.PWD-Chr17 m 8.2 1.07   8 0.377 0.13 7.0, 10.1 -1.85
B6.PWD-Chr18 f 9.8 0.883   8 0.312 0.0901 8.6, 11.2 -0.86
B6.PWD-Chr18 m 9.45 0.655   8 0.231 0.0693 8.6, 10.5 -0.36
B6.PWD-Chr19 f 10.8 0.706   8 0.25 0.0653 9.9, 12.1 0.86
B6.PWD-Chr19 m 9.84 1.09   8 0.384 0.11 8.9, 12.3 0.11
B6.PWD-Chr3 m 10.9 0.87   9 0.29 0.0797 9.6, 12.3 1.37
B6.PWD-Chr5 f 10.4 0.875   8 0.309 0.0845 8.9, 11.5 0.17
B6.PWD-Chr5 m 10.3 1.28   8 0.453 0.124 8.4, 12.0 0.66
B6.PWD-Chr6 f 11.0 1.84   8 0.652 0.167 7.1, 12.5 1.2
B6.PWD-Chr6 m 11.5 0.396   8 0.14 0.0343 11.0, 12.1 2.09
B6.PWD-Chr9 f 9.85 0.545   4 0.272 0.0553 9.4, 10.6 -0.78
B6.PWD-Chr9 m 9.23 1.23   7 0.464 0.133 7.4, 10.6 -0.62
B6.PWD-ChrX.1 f 9.56 0.786   5 0.352 0.0822 8.7, 10.5 -1.28
B6.PWD-ChrX.1 m 7.9 1.24   6 0.505 0.156 5.9, 9.4 -2.21
B6.PWD-ChrX.2 m 9.46 1.24   9 0.413 0.131 8.3, 12.1 -0.35
B6.PWD-ChrX.3 f 9.9 1.22   8 0.433 0.124 8.3, 11.7 -0.69
B6.PWD-ChrX.3 m 10.3 1.73   8 0.612 0.169 8.4, 12.2 0.66
B6.PWD-ChrY f 9.77 1.58   8 0.558 0.161 6.9, 12.1 -0.91
B6.PWD-ChrY m 8.89 1.03   8 0.363 0.116 7.5, 10.6 -1.03
B6.PWD-mt f 10.8 1.45   8 0.512 0.135 8.6, 12.4 0.86
B6.PWD-mt m 8.88 2.09   8 0.739 0.236 6.3, 12.1 -1.04
C57BL/6J f 11.7 0.605   8 0.214 0.0519 10.8, 12.5 2.41
C57BL/6J m 10.4 0.713   8 0.252 0.0686 9.3, 11.6 0.77
PWD/PhJ f 10.9 0.901   8 0.318 0.0826 9.5, 11.9 1.03
PWD/PhJ m 10.6 0.622   9 0.207 0.0588 9.8, 11.6 1.01


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 9.85 0.3856 10.6084 9.0916
B6.PWD-Chr1 m 9.1 0.3856 9.8584 8.3416
B6.PWD-Chr10.1 f 10.575 0.3856 11.3334 9.8166
B6.PWD-Chr10.1 m 9.9375 0.3856 10.6959 9.1791
B6.PWD-Chr10.2 f 10.1545 0.3288 10.8013 9.5078
B6.PWD-Chr10.2 m 9.21 0.3449 9.8884 8.5316
B6.PWD-Chr10.3 f 10.3 0.3856 11.0584 9.5416
B6.PWD-Chr10.3 m 10.15 0.3856 10.9084 9.3916
B6.PWD-Chr11.1 f 10.9917 0.3148 11.6109 10.3724
B6.PWD-Chr11.1 m 10.6667 0.3148 11.2859 10.0474
B6.PWD-Chr11.2 f 8.99 0.3449 9.6684 8.3116
B6.PWD-Chr11.2 m 9.05 0.3449 9.7284 8.3716
B6.PWD-Chr11.3 f 10.23 0.3449 10.9084 9.5516
B6.PWD-Chr11.3 m 9.8125 0.3856 10.5709 9.0541
B6.PWD-Chr12 f 10.1625 0.3856 10.9209 9.4041
B6.PWD-Chr12 m 10.075 0.3856 10.8334 9.3166
B6.PWD-Chr14 f 10.1333 0.3635 10.8484 9.4183
B6.PWD-Chr14 m 10.3778 0.3635 11.0928 9.6627
B6.PWD-Chr15 f 10.0875 0.3856 10.8459 9.3291
B6.PWD-Chr15 m 9.8625 0.3856 10.6209 9.1041
B6.PWD-Chr16 f 10.45 0.3449 11.1284 9.7716
B6.PWD-Chr16 m 9.55 0.4452 10.4258 8.6742
B6.PWD-Chr17 f 10.45 0.3856 11.2084 9.6916
B6.PWD-Chr17 m 8.2 0.3856 8.9584 7.4416
B6.PWD-Chr18 f 9.8 0.3856 10.5584 9.0416
B6.PWD-Chr18 m 9.45 0.3856 10.2084 8.6916
B6.PWD-Chr19 f 10.8125 0.3856 11.5709 10.0541
B6.PWD-Chr19 m 9.8375 0.3856 10.5959 9.0791
B6.PWD-Chr5 f 10.35 0.3856 11.1084 9.5916
B6.PWD-Chr5 m 10.2875 0.3856 11.0459 9.5291
B6.PWD-Chr6 f 11.025 0.3856 11.7834 10.2666
B6.PWD-Chr6 m 11.5375 0.3856 12.2959 10.7791
B6.PWD-Chr9 f 9.85 0.5453 10.9226 8.7774
B6.PWD-Chr9 m 9.2286 0.4122 10.0394 8.4178
B6.PWD-ChrX.1 f 9.56 0.4877 10.5193 8.6007
B6.PWD-ChrX.1 m 7.9 0.4452 8.7758 7.0242
B6.PWD-ChrX.3 f 9.9 0.3856 10.6584 9.1416
B6.PWD-ChrX.3 m 10.2625 0.3856 11.0209 9.5041
B6.PWD-ChrY f 9.775 0.3856 10.5334 9.0166
B6.PWD-ChrY m 8.8875 0.3856 9.6459 8.1291
B6.PWD-mt f 10.75 0.3856 11.5084 9.9916
B6.PWD-mt m 8.875 0.3856 9.6334 8.1166
C57BL/6J f 11.65 0.3856 12.4084 10.8916
C57BL/6J m 10.4 0.3856 11.1584 9.6416
PWD/PhJ f 10.9 0.3856 11.6584 10.1416
PWD/PhJ m 10.5778 0.3635 11.2928 9.8627


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 both 9.475 0.2726 10.0113 8.9387
B6.PWD-Chr10.1 both 10.2562 0.2726 10.7925 9.72
B6.PWD-Chr10.2 both 9.6823 0.2382 10.1509 9.2136
B6.PWD-Chr10.3 both 10.225 0.2726 10.7613 9.6887
B6.PWD-Chr11.1 both 10.8292 0.2226 11.267 10.3913
B6.PWD-Chr11.2 both 9.02 0.2438 9.4997 8.5403
B6.PWD-Chr11.3 both 10.0213 0.2586 10.53 9.5125
B6.PWD-Chr12 both 10.1187 0.2726 10.655 9.5825
B6.PWD-Chr14 both 10.2556 0.257 10.7612 9.7499
B6.PWD-Chr15 both 9.975 0.2726 10.5113 9.4387
B6.PWD-Chr16 both 10.0 0.2816 10.5539 9.4461
B6.PWD-Chr17 both 9.325 0.2726 9.8613 8.7887
B6.PWD-Chr18 both 9.625 0.2726 10.1613 9.0887
B6.PWD-Chr19 both 10.325 0.2726 10.8613 9.7887
B6.PWD-Chr5 both 10.3187 0.2726 10.855 9.7825
B6.PWD-Chr6 both 11.2812 0.2726 11.8175 10.745
B6.PWD-Chr9 both 9.5393 0.3418 10.2116 8.867
B6.PWD-ChrX.1 both 8.73 0.3302 9.3795 8.0805
B6.PWD-ChrX.3 both 10.0812 0.2726 10.6175 9.545
B6.PWD-ChrY both 9.3312 0.2726 9.8675 8.795
B6.PWD-mt both 9.8125 0.2726 10.3488 9.2762
C57BL/6J both 11.025 0.2726 11.5613 10.4887
PWD/PhJ both 10.7389 0.2649 11.2601 10.2177




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA