Project measure / variable:   Jentsch1   revers_anticipatory

ID, description, units MPD:40309   revers_anticipatory   average number of anticipatory responses per trial, reversal phase   [n]  
Data set, strains Jentsch1   BXD w/par   53 strains     sex: m     age: 17wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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Jentsch1 - average number of anticipatory responses per trial, reversal phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested53 strains
Mean of the strain means3.29   n
Median of the strain means3.05   n
SD of the strain means± 1.29
Coefficient of variation (CV)0.393
Min–max range of strain means1.40   –   7.10   n
Mean sample size per strain3.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 52 236.0782 4.54 1.3675 0.082
Residuals 123 408.3362 3.3198


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD100/RwwJ m 2.16 1.18   5 0.527 0.545 0.8, 3.4 -0.87
BXD102/RwwJ m 3.36 1.27   5 0.568 0.378 2.1, 5.4 0.05
BXD12/TyJ m 7.1 1.56   2   1.1 0.219 6.0, 8.2 2.94
BXD13/TyJ m 4.35 0.636   2   0.45 0.146 3.9, 4.8 0.82
BXD14/TyJ m 3.0 1.13   2   0.8 0.377 2.2, 3.8 -0.23
BXD16/TyJ m 6.6 5.52   2   3.9 0.836 2.7, 10.5 2.56
BXD18/TyJ m 3.5 2.97   2   2.1 0.849 1.4, 5.6 0.16
BXD1/TyJ m 2.96 1.5   5 0.67 0.506 1.6, 5.4 -0.26
BXD22/TyJ m 5.6 0.849   2   0.6 0.152 5.0, 6.2 1.78
BXD24/TyJ m 2.04 1.06   5 0.473 0.518 0.9, 3.4 -0.97
BXD25/TyJ m 3.7 1.84   2   1.3 0.497 2.4, 5.0 0.32
BXD29-Tlr4lps-2J/J m 5.3 5.94   2   4.2 1.12 1.1, 9.5 1.55
BXD2/TyJ m 2.45 0.919   2   0.65 0.375 1.8, 3.1 -0.65
BXD31/TyJ m 4.42 1.64   4 0.82 0.371 2.5, 6.3 0.87
BXD32/TyJ m 4.75 1.08   4 0.539 0.227 3.6, 6.2 1.13
BXD34/TyJ m 3.57 1.62   6 0.662 0.454 1.8, 5.7 0.22
BXD36/TyJ m 3.05 1.34   2   0.95 0.44 2.1, 4.0 -0.19
BXD38/TyJ m 3.98 2.84   4 1.42 0.713 1.4, 8.0 0.53
BXD39/TyJ m 1.63 0.503   3 0.291 0.308 1.1, 2.1 -1.28
BXD40/TyJ m 4.02 1.92   5 0.857 0.477 2.0, 6.2 0.56
BXD42/TyJ m 2.32 0.39   5 0.174 0.168 1.8, 2.6 -0.75
BXD43/RwwJ m 4.03 1.25   4 0.625 0.311 2.8, 5.2 0.57
BXD44/RwwJ m 2.2 0.283   2   0.2 0.129 2.0, 2.4 -0.84
BXD45/RwwJ m 3.1 2.83   2   2.0 0.912 1.1, 5.1 -0.15
BXD48a/RwwJ m 4.82 3.5   4 1.75 0.726 1.2, 9.6 1.18
BXD49/RwwJ m 2.8 0.849   2   0.6 0.303 2.2, 3.4 -0.38
BXD50/RwwJ m 3.05 1.42   4 0.709 0.465 1.0, 4.0 -0.19
BXD51/RwwJ m 1.83 0.95   3 0.549 0.518 0.9, 2.8 -1.13
BXD55/RwwJ m 2.43 1.55   3 0.895 0.637 1.3, 4.2 -0.67
BXD56/RwwJ m 2.6 1.13   2   0.8 0.435 1.8, 3.4 -0.53
BXD60/RwwJ m 2.05 0.636   2   0.45 0.31 1.6, 2.5 -0.96
BXD61/RwwJ m 1.67 0.351   3 0.203 0.211 1.3, 2.0 -1.25
BXD62/RwwJ m 2.38 1.04   5 0.463 0.435 1.1, 3.9 -0.7
BXD65/RwwJ m 4.65 0.212   2   0.15 0.0456 4.5, 4.8 1.05
BXD66/RwwJ m 5.25 1.48   2   1.05 0.283 4.2, 6.3 1.51
BXD68/RwwJ m 3.78 2.09   6 0.855 0.554 1.1, 7.1 0.38
BXD70/RwwJ m 2.23 0.379   3 0.219 0.17 1.8, 2.5 -0.82
BXD71/RwwJ m 3.75 0.896   4 0.448 0.239 2.5, 4.4 0.35
BXD73a/RwwJ m 2.88 1.93   5 0.862 0.669 1.1, 6.1 -0.32
BXD73b/RwwJ m 1.65 0.957   4 0.479 0.58 0.8, 3.0 -1.27
BXD73/RwwJ m 1.75 0.495   2   0.35 0.283 1.4, 2.1 -1.19
BXD75/RwwJ m 4.54 4.28   5 1.91 0.942 1.1, 12.0 0.97
BXD77/RwwJ m 1.4 0.849   2   0.6 0.606 0.8, 2.0 -1.46
BXD83/RwwJ m 3.9 1.71   4 0.857 0.44 2.3, 6.3 0.47
BXD84/RwwJ m 3.4 0.608   3 0.351 0.179 3.0, 4.1 0.08
BXD85/RwwJ m 1.8 1.1   5 0.49 0.609 0.8, 3.6 -1.15
BXD86/RwwJ m 2.73 0.695   4 0.347 0.255 1.7, 3.2 -0.43
BXD89/RwwJ m 2.33 1.33   3 0.769 0.571 1.2, 3.8 -0.74
BXD90/RwwJ m 2.1 1.13   2   0.8 0.539 1.3, 2.9 -0.92
BXD95/RwwJ m 3.05 1.48   2   1.05 0.487 2.0, 4.1 -0.19
BXD98/RwwJ m 4.65 1.2   2   0.85 0.259 3.8, 5.5 1.05
C57BL/6J m 3.6 2.05   5 0.918 0.57 1.9, 7.0 0.24
DBA/2J m 2.2 1.15   4 0.576 0.524 0.7, 3.4 -0.84


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD100/RwwJ m 2.16 0.8148 3.7729 0.5471
BXD102/RwwJ m 3.36 0.8148 4.9729 1.7471
BXD12/TyJ m 7.1 1.2884 9.6503 4.5497
BXD13/TyJ m 4.35 1.2884 6.9003 1.7997
BXD14/TyJ m 3.0 1.2884 5.5503 0.4497
BXD16/TyJ m 6.6 1.2884 9.1503 4.0497
BXD18/TyJ m 3.5 1.2884 6.0503 0.9497
BXD1/TyJ m 2.96 0.8148 4.5729 1.3471
BXD22/TyJ m 5.6 1.2884 8.1503 3.0497
BXD24/TyJ m 2.04 0.8148 3.6529 0.4271
BXD25/TyJ m 3.7 1.2884 6.2503 1.1497
BXD29-Tlr4lps-2J/J m 5.3 1.2884 7.8503 2.7497
BXD2/TyJ m 2.45 1.2884 5.0003 0.0
BXD31/TyJ m 4.425 0.911 6.2283 2.6217
BXD32/TyJ m 4.75 0.911 6.5533 2.9467
BXD34/TyJ m 3.5667 0.7438 5.0391 2.0943
BXD36/TyJ m 3.05 1.2884 5.6003 0.4997
BXD38/TyJ m 3.975 0.911 5.7783 2.1717
BXD39/TyJ m 1.6333 1.052 3.7156 0.0
BXD40/TyJ m 4.02 0.8148 5.6329 2.4071
BXD42/TyJ m 2.32 0.8148 3.9329 0.7071
BXD43/RwwJ m 4.025 0.911 5.8283 2.2217
BXD44/RwwJ m 2.2 1.2884 4.7503 0.0
BXD45/RwwJ m 3.1 1.2884 5.6503 0.5497
BXD48a/RwwJ m 4.825 0.911 6.6283 3.0217
BXD49/RwwJ m 2.8 1.2884 5.3503 0.2497
BXD50/RwwJ m 3.05 0.911 4.8533 1.2467
BXD51/RwwJ m 1.8333 1.052 3.9156 0.0
BXD55/RwwJ m 2.4333 1.052 4.5156 0.3511
BXD56/RwwJ m 2.6 1.2884 5.1503 0.0497
BXD60/RwwJ m 2.05 1.2884 4.6003 0.0
BXD61/RwwJ m 1.6667 1.052 3.7489 0.0
BXD62/RwwJ m 2.38 0.8148 3.9929 0.7671
BXD65/RwwJ m 4.65 1.2884 7.2003 2.0997
BXD66/RwwJ m 5.25 1.2884 7.8003 2.6997
BXD68/RwwJ m 3.7833 0.7438 5.2557 2.3109
BXD70/RwwJ m 2.2333 1.052 4.3156 0.1511
BXD71/RwwJ m 3.75 0.911 5.5533 1.9467
BXD73a/RwwJ m 2.88 0.8148 4.4929 1.2671
BXD73b/RwwJ m 1.65 0.911 3.4533 0.0
BXD73/RwwJ m 1.75 1.2884 4.3003 0.0
BXD75/RwwJ m 4.54 0.8148 6.1529 2.9271
BXD77/RwwJ m 1.4 1.2884 3.9503 0.0
BXD83/RwwJ m 3.9 0.911 5.7033 2.0967
BXD84/RwwJ m 3.4 1.052 5.4823 1.3177
BXD85/RwwJ m 1.8 0.8148 3.4129 0.1871
BXD86/RwwJ m 2.725 0.911 4.5283 0.9217
BXD89/RwwJ m 2.3333 1.052 4.4156 0.2511
BXD90/RwwJ m 2.1 1.2884 4.6503 0.0
BXD95/RwwJ m 3.05 1.2884 5.6003 0.4997
BXD98/RwwJ m 4.65 1.2884 7.2003 2.0997
C57BL/6J m 3.6 0.8148 5.2129 1.9871
DBA/2J m 2.2 0.911 4.0033 0.3967




  GWAS USING LINEAR MIXED MODELS