Project measure / variable:   Harrill1   microvesic_multi_trt

ID, description, units MPD:39547   microvesic_multi_trt   hepatocytic cytoplasmic, microvesiculation, multifocal   [score]  isoniazid  
isoniazid study
Data set, strains Harrill1   inbred   34 strains     sex: f     age: 8-10wks
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  STRAIN COMPARISON PLOT
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Harrill1 - hepatocytic cytoplasmic, microvesiculation, multifocal isoniazid

BALB/cJSWR/JC58/JC3H/HeJDBA/2JFVB/NJLP/JNOD/ShiLtJPL/JAKR/JCBA/JSJL/JKK/HlJMA/MyJBUB/BnJCE/JRIIIS/JSEA/GnJI/LnJSM/JC57BR/cdJNON/ShiLtJC57BLKS/JNZW/LacJWSB/EiJP/JMRL/MpJLG/JNOR/LtJBTBR T<+> Itpr3<tf>/JPWK/PhJ129S1/SvImJA/JC57BL/6J score 0.00.51.01.52.02.53.0femalemale


  MEASURE SUMMARY
Measure Summary Female
Number of strains tested34 strains
Mean of the strain means0.103   score
Median of the strain means0   score
SD of the strain means± 0.436
Coefficient of variation (CV)4.23
Min–max range of strain means0   –   2.50   score
Mean sample size per strain4.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 33 25.0373 0.7587 13.7947 < 0.0001
Residuals 100 5.5 0.055


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 34 (34)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ f 0.0 0.0   4 0.0 0.0 -0.24
A/J f 0.0 0.0   4 0.0 0.0 -0.24
AKR/J f 0.0 0.0   4 0.0 0.0 -0.24
BALB/cJ f 2.5 0.577   4 0.289 0.231 2.0, 3.0 5.5
BTBR T+ Itpr3tf/J f 0.0 0.0   4 0.0 0.0 -0.24
BUB/BnJ f 0.0 0.0   4 0.0 0.0 -0.24
C3H/HeJ f 0.25 0.5   4 0.25 2.0 0.34
C57BL/6J f 0.0 0.0   4 0.0 0.0 -0.24
C57BLKS/J f 0.0 0.0   4 0.0 0.0 -0.24
C57BR/cdJ f 0.0 0.0   4 0.0 0.0 -0.24
C58/J f 0.25 0.5   4 0.25 2.0 0.34
CBA/J f 0.0 0.0   4 0.0 0.0 -0.24
CE/J f 0.0 0.0   4 0.0 0.0 -0.24
DBA/2J f 0.0 0.0   4 0.0 0.0 -0.24
FVB/NJ f 0.0 0.0   4 0.0 0.0 -0.24
I/LnJ f 0.0 0.0   4 0.0 0.0 -0.24
KK/HlJ f 0.0 0.0   4 0.0 0.0 -0.24
LG/J f 0.0 0.0   3 0.0 0.0 -0.24
LP/J f 0.0 0.0   4 0.0 0.0 -0.24
MA/MyJ f 0.0 0.0   4 0.0 0.0 -0.24
MRL/MpJ f 0.0 0.0   4 0.0 0.0 -0.24
NOD/ShiLtJ f 0.0 0.0   4 0.0 0.0 -0.24
NON/ShiLtJ f 0.0 0.0   4 0.0 0.0 -0.24
NOR/LtJ f 0.0 0.0   4 0.0 0.0 -0.24
NZW/LacJ f 0.0 0.0   4 0.0 0.0 -0.24
P/J f 0.0 0.0   4 0.0 0.0 -0.24
PL/J f 0.0 0.0   4 0.0 0.0 -0.24
PWK/PhJ f 0.0 0.0   4 0.0 0.0 -0.24
RIIIS/J f 0.0 0.0   4 0.0 0.0 -0.24
SEA/GnJ f 0.0 0.0   4 0.0 0.0 -0.24
SJL/J f 0.0 0.0   4 0.0 0.0 -0.24
SM/J f 0.0 0.0   4 0.0 0.0 -0.24
SWR/J f 0.5 1.0   4 0.5 2.0 0.91
WSB/EiJ f 0.0 0.0   3 0.0 0.0 -0.24


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.0 0.1173 0.2326 -0.2326
A/J f 0.0 0.1173 0.2326 -0.2326
AKR/J f 0.0 0.1173 0.2326 -0.2326
BALB/cJ f 2.5 0.1173 2.7326 2.2674
BTBR T+ Itpr3tf/J f 0.0 0.1173 0.2326 -0.2326
BUB/BnJ f 0.0 0.1173 0.2326 -0.2326
C3H/HeJ f 0.25 0.1173 0.4826 0.0174
C57BL/6J f 0.0 0.1173 0.2326 -0.2326
C57BLKS/J f 0.0 0.1173 0.2326 -0.2326
C57BR/cdJ f 0.0 0.1173 0.2326 -0.2326
C58/J f 0.25 0.1173 0.4826 0.0174
CBA/J f 0.0 0.1173 0.2326 -0.2326
CE/J f 0.0 0.1173 0.2326 -0.2326
DBA/2J f 0.0 0.1173 0.2326 -0.2326
FVB/NJ f 0.0 0.1173 0.2326 -0.2326
I/LnJ f 0.0 0.1173 0.2326 -0.2326
KK/HlJ f 0.0 0.1173 0.2326 -0.2326
LG/J f 0.0 0.1354 0.2686 -0.2686
LP/J f 0.0 0.1173 0.2326 -0.2326
MA/MyJ f 0.0 0.1173 0.2326 -0.2326
MRL/MpJ f 0.0 0.1173 0.2326 -0.2326
NOD/ShiLtJ f 0.0 0.1173 0.2326 -0.2326
NON/ShiLtJ f 0.0 0.1173 0.2326 -0.2326
NOR/LtJ f 0.0 0.1173 0.2326 -0.2326
NZW/LacJ f 0.0 0.1173 0.2326 -0.2326
P/J f 0.0 0.1173 0.2326 -0.2326
PL/J f 0.0 0.1173 0.2326 -0.2326
PWK/PhJ f 0.0 0.1173 0.2326 -0.2326
RIIIS/J f 0.0 0.1173 0.2326 -0.2326
SEA/GnJ f 0.0 0.1173 0.2326 -0.2326
SJL/J f 0.0 0.1173 0.2326 -0.2326
SM/J f 0.0 0.1173 0.2326 -0.2326
SWR/J f 0.5 0.1173 0.7326 0.2674
WSB/EiJ f 0.0 0.1354 0.2686 -0.2686




  GWAS USING LINEAR MIXED MODELS

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