Phenotype measure:   Harrill1   microvesic_multi_ctrl

ID, description, units MPD:39546   microvesic_multi_ctrl   hepatocytic cytoplasmic, microvesiculation, multifocal   [score]  control
isoniazid study
Data set, strains Harrill1   inbred   34 strains     sex: f     age: 8-10wks
Procedure histopathology
Ontology mappings

  STRAIN COMPARISON PLOT
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Harrill1 - hepatocytic cytoplasmic, microvesiculation, multifocal control



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested34 strains
Mean of the strain means0.110   score
Median of the strain means0   score
SD of the strain means± 0.187
Coefficient of variation (CV)1.69
Min–max range of strain means0   –   0.750   score
Mean sample size per strain4.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 33 4.5956 0.1393 0.963 0.5333
Residuals 102 14.75 0.1446


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.0 0.0   4 0.0 0.0 -0.59
A/J f 0.0 0.0   4 0.0 0.0 -0.59
AKR/J f 0.0 0.0   4 0.0 0.0 -0.59
BALB/cJ f 0.0 0.0   4 0.0 0.0 -0.59
BTBR T+ Itpr3tf/J f 0.0 0.0   4 0.0 0.0 -0.59
BUB/BnJ f 0.0 0.0   4 0.0 0.0 -0.59
C3H/HeJ f 0.25 0.5   4 0.25 2.0 0.75
C57BL/6J f 0.25 0.5   4 0.25 2.0 0.75
C57BLKS/J f 0.0 0.0   4 0.0 0.0 -0.59
C57BR/cdJ f 0.0 0.0   4 0.0 0.0 -0.59
C58/J f 0.0 0.0   4 0.0 0.0 -0.59
CBA/J f 0.0 0.0   4 0.0 0.0 -0.59
CE/J f 0.0 0.0   4 0.0 0.0 -0.59
DBA/2J f 0.25 0.5   4 0.25 2.0 0.75
FVB/NJ f 0.0 0.0   4 0.0 0.0 -0.59
I/LnJ f 0.0 0.0   4 0.0 0.0 -0.59
KK/HlJ f 0.75 1.5   4 0.75 2.0 3.43
LG/J f 0.0 0.0   4 0.0 0.0 -0.59
LP/J f 0.25 0.5   4 0.25 2.0 0.75
MA/MyJ f 0.0 0.0   4 0.0 0.0 -0.59
MRL/MpJ f 0.5 0.577   4 0.289 1.15 2.09
NOD/ShiLtJ f 0.25 0.5   4 0.25 2.0 0.75
NON/ShiLtJ f 0.0 0.0   4 0.0 0.0 -0.59
NOR/LtJ f 0.5 0.577   4 0.289 1.15 2.09
NZW/LacJ f 0.0 0.0   4 0.0 0.0 -0.59
P/J f 0.0 0.0   4 0.0 0.0 -0.59
PL/J f 0.0 0.0   4 0.0 0.0 -0.59
PWK/PhJ f 0.0 0.0   4 0.0 0.0 -0.59
RIIIS/J f 0.0 0.0   4 0.0 0.0 -0.59
SEA/GnJ f 0.0 0.0   4 0.0 0.0 -0.59
SJL/J f 0.25 0.5   4 0.25 2.0 0.75
SM/J f 0.25 0.5   4 0.25 2.0 0.75
SWR/J f 0.25 0.5   4 0.25 2.0 0.75
WSB/EiJ f 0.0 0.0   4 0.0 0.0 -0.59


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.0 0.1901 0.3771 -0.3771
A/J f 0.0 0.1901 0.3771 -0.3771
AKR/J f 0.0 0.1901 0.3771 -0.3771
BALB/cJ f 0.0 0.1901 0.3771 -0.3771
BTBR T+ Itpr3tf/J f 0.0 0.1901 0.3771 -0.3771
BUB/BnJ f 0.0 0.1901 0.3771 -0.3771
C3H/HeJ f 0.25 0.1901 0.6271 -0.1271
C57BL/6J f 0.25 0.1901 0.6271 -0.1271
C57BLKS/J f 0.0 0.1901 0.3771 -0.3771
C57BR/cdJ f 0.0 0.1901 0.3771 -0.3771
C58/J f 0.0 0.1901 0.3771 -0.3771
CBA/J f 0.0 0.1901 0.3771 -0.3771
CE/J f 0.0 0.1901 0.3771 -0.3771
DBA/2J f 0.25 0.1901 0.6271 -0.1271
FVB/NJ f 0.0 0.1901 0.3771 -0.3771
I/LnJ f 0.0 0.1901 0.3771 -0.3771
KK/HlJ f 0.75 0.1901 1.1271 0.3729
LG/J f 0.0 0.1901 0.3771 -0.3771
LP/J f 0.25 0.1901 0.6271 -0.1271
MA/MyJ f 0.0 0.1901 0.3771 -0.3771
MRL/MpJ f 0.5 0.1901 0.8771 0.1229
NOD/ShiLtJ f 0.25 0.1901 0.6271 -0.1271
NON/ShiLtJ f 0.0 0.1901 0.3771 -0.3771
NOR/LtJ f 0.5 0.1901 0.8771 0.1229
NZW/LacJ f 0.0 0.1901 0.3771 -0.3771
P/J f 0.0 0.1901 0.3771 -0.3771
PL/J f 0.0 0.1901 0.3771 -0.3771
PWK/PhJ f 0.0 0.1901 0.3771 -0.3771
RIIIS/J f 0.0 0.1901 0.3771 -0.3771
SEA/GnJ f 0.0 0.1901 0.3771 -0.3771
SJL/J f 0.25 0.1901 0.6271 -0.1271
SM/J f 0.25 0.1901 0.6271 -0.1271
SWR/J f 0.25 0.1901 0.6271 -0.1271
WSB/EiJ f 0.0 0.1901 0.3771 -0.3771




  GWAS USING LINEAR MIXED MODELS