Project measure / variable:   Crowley1   jawtremor_d120

ID, description, units MPD:39444   jawtremor_d120   jaw tremor duration, 15 min test   [s]  on day 120  
haloperidol study
Data set, strains Crowley1   inbred w/CC8   26 strains     sex: m     age: 9-28wks
Procedure behavior observation
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  STRAIN COMPARISON PLOT
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Crowley1 - jaw tremor duration, 15 min test on day 120



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested26 strains
Mean of the strain means16.4   s
Median of the strain means17.7   s
SD of the strain means± 13.7
Coefficient of variation (CV)0.833
Min–max range of strain means0   –   51.3   s
Mean sample size per strain5.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 25 26863.0435 1074.5217 3.8112 < 0.0001
Residuals 122 34396.5984 281.9393


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 3.88 5.91   8 2.09 1.53 -0.92
A/J m 0.4 0.548   5 0.245 1.37 -1.17
AKR/J m 6.6 7.6   5 3.4 1.15 -0.72
BALB/cByJ m 1.5 2.38   4 1.19 1.59 -1.09
BTBR T+ Itpr3tf/J m 0.0 0.0   8 0.0 0.0 -1.2
C3H/HeJ m 29.8 18.8   4 9.41 0.633 15.0, 57.0 0.98
C57BL/6J m 22.2 23.6   5 10.6 1.06 0.42
C57BLKS/J m 17.0 16.8   5 7.5 0.987 4.0, 45.0 0.04
CAST/EiJ m 4.4 3.05   5 1.36 0.693 1.0, 8.0 -0.88
CBA/J m 31.8 20.9   5 9.37 0.659 9.0, 62.0 1.12
DBA/2J m 18.6 16.3   9 5.44 0.879 0.16
DDY/JclSidSeyFrkJ m 33.3 17.5   7 6.6 0.525 20.0, 72.0 1.23
FVB/NJ m 19.0 12.1   5 5.41 0.637 3.0, 32.0 0.19
KK/HlJ m 27.9 7.73   7 2.92 0.278 16.0, 36.0 0.84
MA/MyJ m 51.3 46.6   6 19.0 0.908 15.0, 143.0 2.55
MOLF/EiJ m 1.4 2.19   5 0.98 1.56 -1.1
MRL/MpJ m 0.0 0.0   5 0.0 0.0 -1.2
MSM/MsJ m 1.6 3.05   5 1.36 1.91 -1.08
NOD/ShiLtJ m 12.4 5.18   5 2.32 0.417 8.0, 21.0 -0.29
NON/ShiLtJ m 11.3 15.6   7 5.89 1.38 -0.37
NZL/LtJ m 35.7 31.8   7 12.0 0.89 8.0, 93.0 1.41
NZO/HlLtJ m 29.5 18.5   4 9.24 0.627 10.0, 54.0 0.96
NZW/LacJ m 21.2 14.2   5 6.34 0.669 9.0, 45.0 0.35
PWK/PhJ m 20.8 7.29   5 3.26 0.351 12.0, 28.0 0.32
SJL/J m 7.0 3.74   4 1.87 0.535 3.0, 12.0 -0.69
SM/J m 18.4 17.6   8 6.21 0.956 0.14


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 3.875 5.9365 15.627 -7.877
A/J m 0.4 7.5092 15.2652 -14.4652
AKR/J m 6.6 7.5092 21.4652 -8.2652
BALB/cByJ m 1.5 8.3955 18.1198 -15.1198
BTBR T+ Itpr3tf/J m 0.0 5.9365 11.752 -11.752
C3H/HeJ m 29.75 8.3955 46.3698 13.1302
C57BL/6J m 22.2 7.5092 37.0652 7.3348
C57BLKS/J m 17.0 7.5092 31.8652 2.1348
CAST/EiJ m 4.4 7.5092 19.2652 -10.4652
CBA/J m 31.8 7.5092 46.6652 16.9348
DBA/2J m 18.5556 5.597 29.6354 7.4757
DDY/JclSidSeyFrkJ m 33.2857 6.3464 45.8491 20.7223
FVB/NJ m 19.0 7.5092 33.8652 4.1348
KK/HlJ m 27.8571 6.3464 40.4205 15.2938
MA/MyJ m 51.3333 6.8549 64.9033 37.7633
MOLF/EiJ m 1.4 7.5092 16.2652 -13.4652
MRL/MpJ m 0.0 7.5092 14.8652 -14.8652
MSM/MsJ m 1.6 7.5092 16.4652 -13.2652
NOD/ShiLtJ m 12.4 7.5092 27.2652 -2.4652
NON/ShiLtJ m 11.2857 6.3464 23.8491 -1.2777
NZL/LtJ m 35.7143 6.3464 48.2777 23.1509
NZO/HlLtJ m 29.5 8.3955 46.1198 12.8802
NZW/LacJ m 21.2 7.5092 36.0652 6.3348
PWK/PhJ m 20.8 7.5092 35.6652 5.9348
SJL/J m 7.0 8.3955 23.6198 -9.6198
SM/J m 18.375 5.9365 30.127 6.623




  GWAS USING LINEAR MIXED MODELS