Project measure / variable:   Crowley1   jawtremor_d60

ID, description, units MPD:39443   jawtremor_d60   jaw tremor duration, 15 min test   [s]  on day 60  
haloperidol study
Data set, strains Crowley1   inbred w/CC8   27 strains     sex: m     age: 9-28wks
Procedure behavior observation
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  STRAIN COMPARISON PLOT
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Crowley1 - jaw tremor duration, 15 min test on day 60



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested27 strains
Mean of the strain means16.0   s
Median of the strain means17.2   s
SD of the strain means± 13.2
Coefficient of variation (CV)0.824
Min–max range of strain means0   –   46.2   s
Mean sample size per strain5.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 26 24187.7301 930.2973 4.2911 < 0.0001
Residuals 130 28183.6329 216.7972


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 2.0 2.67   8 0.945 1.34 -1.06
A/J m 0.0 0.0   5 0.0 0.0 -1.21
AKR/J m 0.2 0.447   5 0.2 2.24 -1.2
BALB/cByJ m 0.0 0.0   4 0.0 0.0 -1.21
BTBR T+ Itpr3tf/J m 0.0 0.0   8 0.0 0.0 -1.21
C3H/HeJ m 23.0 14.4   4 7.18 0.624 3.0, 36.0 0.53
C57BL/6J m 26.6 26.6   5 11.9 1.0 3.0, 68.0 0.8
C57BLKS/J m 25.0 34.8   5 15.6 1.39 0.68
CAST/EiJ m 4.4 3.85   5 1.72 0.874 -0.88
CBA/J m 20.6 10.8   5 4.83 0.525 9.0, 38.0 0.34
DBA/2J m 25.6 19.8   9 6.61 0.776 4.0, 70.0 0.72
DDY/JclSidSeyFrkJ m 17.7 17.5   7 6.62 0.988 0.12
FVB/NJ m 15.8 10.4   5 4.64 0.657 6.0, 33.0 -0.02
KK/HlJ m 32.9 20.5   7 7.77 0.625 11.0, 69.0 1.27
MA/MyJ m 29.0 15.9   6 6.48 0.547 6.0, 51.0 0.98
MOLF/EiJ m 2.8 5.22   5 2.33 1.86 -1.0
MRL/MpJ m 4.6 9.21   5 4.12 2.0 -0.87
MSM/MsJ m 6.5 8.67   6 3.54 1.33 -0.72
NOD/ShiLtJ m 6.0 12.9   5 5.75 2.14 -0.76
NON/ShiLtJ m 21.8 11.7   8 4.14 0.538 6.0, 44.0 0.43
NZL/LtJ m 17.2 7.96   8 2.81 0.461 0.09
NZO/HlLtJ m 46.2 18.1   4 9.04 0.391 29.0, 68.0 2.28
NZW/LacJ m 36.0 5.24   5 2.35 0.146 28.0, 41.0 1.51
PWK/PhJ m 32.8 18.9   5 8.45 0.576 9.0, 61.0 1.27
SJL/J m 0.8 1.79   5 0.8 2.24 -1.15
SM/J m 14.4 23.3   8 8.23 1.62 -0.12
WSB/EiJ m 21.4 14.9   5 6.68 0.698 10.0, 47.0 0.4


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 2.0 5.2057 12.2989 -8.2989
A/J m 0.0 6.5848 13.0272 -13.0272
AKR/J m 0.2 6.5848 13.2272 -12.8272
BALB/cByJ m 0.0 7.362 14.5649 -14.5649
BTBR T+ Itpr3tf/J m 0.0 5.2057 10.2989 -10.2989
C3H/HeJ m 23.0 7.362 37.5649 8.4351
C57BL/6J m 26.6 6.5848 39.6272 13.5728
C57BLKS/J m 25.0 6.5848 38.0272 11.9728
CAST/EiJ m 4.4 6.5848 17.4272 -8.6272
CBA/J m 20.6 6.5848 33.6272 7.5728
DBA/2J m 25.5556 4.908 35.2655 15.8456
DDY/JclSidSeyFrkJ m 17.7143 5.5652 28.7243 6.7043
FVB/NJ m 15.8 6.5848 28.8272 2.7728
KK/HlJ m 32.8571 5.5652 43.8671 21.8471
MA/MyJ m 29.0 6.0111 40.8922 17.1078
MOLF/EiJ m 2.8 6.5848 15.8272 -10.2272
MRL/MpJ m 4.6 6.5848 17.6272 -8.4272
MSM/MsJ m 6.5 6.0111 18.3922 -5.3922
NOD/ShiLtJ m 6.0 6.5848 19.0272 -7.0272
NON/ShiLtJ m 21.75 5.2057 32.0489 11.4511
NZL/LtJ m 17.25 5.2057 27.5489 6.9511
NZO/HlLtJ m 46.25 7.362 60.8149 31.6851
NZW/LacJ m 36.0 6.5848 49.0272 22.9728
PWK/PhJ m 32.8 6.5848 45.8272 19.7728
SJL/J m 0.8 6.5848 13.8272 -12.2272
SM/J m 14.375 5.2057 24.6739 4.0761
WSB/EiJ m 21.4 6.5848 34.4272 8.3728




  GWAS USING LINEAR MIXED MODELS