Project measure / variable:   Crowley1   jawtremor_d30

ID, description, units MPD:39442   jawtremor_d30   jaw tremor duration, 15 min test   [s]  on day 30  
haloperidol study
Data set, strains Crowley1   inbred w/CC8   27 strains     sex: m     age: 9-28wks
Procedure behavior observation
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  STRAIN COMPARISON PLOT
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Crowley1 - jaw tremor duration, 15 min test on day 30



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested27 strains
Mean of the strain means22.8   s
Median of the strain means21.0   s
SD of the strain means± 17.9
Coefficient of variation (CV)0.785
Min–max range of strain means0   –   73.2   s
Mean sample size per strain5.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 26 46771.9503 1798.9212 6.9483 < 0.0001
Residuals 132 34174.8925 258.9007


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.0 0.0   8 0.0 0.0 -1.27
A/J m 5.0 4.69   5 2.1 0.938 -0.99
AKR/J m 3.0 4.24   5 1.9 1.41 -1.11
BALB/cByJ m 1.4 3.13   5 1.4 2.24 -1.2
BTBR T+ Itpr3tf/J m 0.0 0.0   8 0.0 0.0 -1.27
C3H/HeJ m 39.0 14.5   5 6.47 0.371 14.0, 51.0 0.91
C57BL/6J m 15.6 12.7   5 5.7 0.817 4.0, 37.0 -0.4
C57BLKS/J m 23.4 14.6   5 6.52 0.623 1.0, 37.0 0.04
CAST/EiJ m 11.8 10.6   5 4.76 0.902 -0.61
CBA/J m 40.4 7.6   5 3.4 0.188 34.0, 53.0 0.99
DBA/2J m 35.8 24.8   9 8.26 0.692 9.0, 87.0 0.73
DDY/JclSidSeyFrkJ m 10.3 8.5   7 3.21 0.826 -0.7
FVB/NJ m 37.2 8.98   5 4.02 0.241 22.0, 45.0 0.81
KK/HlJ m 21.0 13.0   7 4.9 0.617 2.0, 41.0 -0.1
MA/MyJ m 25.5 15.6   6 6.38 0.613 6.0, 49.0 0.15
MOLF/EiJ m 3.6 2.51   5 1.12 0.697 -1.07
MRL/MpJ m 18.0 14.0   5 6.27 0.779 -0.27
MSM/MsJ m 18.8 27.3   6 11.1 1.45 -0.22
NOD/ShiLtJ m 13.0 9.92   5 4.44 0.763 -0.55
NON/ShiLtJ m 47.6 29.0   8 10.3 0.609 7.0, 93.0 1.39
NZL/LtJ m 25.0 17.9   8 6.33 0.716 0.13
NZO/HlLtJ m 49.5 25.4   4 12.7 0.514 20.0, 82.0 1.5
NZW/LacJ m 73.2 25.4   5 11.3 0.347 44.0, 101.0 2.82
PWK/PhJ m 37.6 8.29   5 3.71 0.221 29.0, 47.0 0.83
SJL/J m 9.2 10.3   5 4.59 1.11 -0.76
SM/J m 21.8 20.2   8 7.14 0.929 2.0, 52.0 -0.05
WSB/EiJ m 27.8 22.0   5 9.83 0.791 0.28


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.0 5.6888 11.253 -11.253
A/J m 5.0 7.1958 19.2341 -9.2341
AKR/J m 3.0 7.1958 17.2341 -11.2341
BALB/cByJ m 1.4 7.1958 15.6341 -12.8341
BTBR T+ Itpr3tf/J m 0.0 5.6888 11.253 -11.253
C3H/HeJ m 39.0 7.1958 53.2341 24.7659
C57BL/6J m 15.6 7.1958 29.8341 1.3659
C57BLKS/J m 23.4 7.1958 37.6341 9.1659
CAST/EiJ m 11.8 7.1958 26.0341 -2.4341
CBA/J m 40.4 7.1958 54.6341 26.1659
DBA/2J m 35.7778 5.3635 46.3872 25.1683
DDY/JclSidSeyFrkJ m 10.2857 6.0816 22.3157 -1.7443
FVB/NJ m 37.2 7.1958 51.4341 22.9659
KK/HlJ m 21.0 6.0816 33.03 8.97
MA/MyJ m 25.5 6.5689 38.4939 12.5061
MOLF/EiJ m 3.6 7.1958 17.8341 -10.6341
MRL/MpJ m 18.0 7.1958 32.2341 3.7659
MSM/MsJ m 18.8333 6.5689 31.8272 5.8394
NOD/ShiLtJ m 13.0 7.1958 27.2341 -1.2341
NON/ShiLtJ m 47.625 5.6888 58.878 36.372
NZL/LtJ m 25.0 5.6888 36.253 13.747
NZO/HlLtJ m 49.5 8.0452 65.4142 33.5858
NZW/LacJ m 73.2 7.1958 87.4341 58.9659
PWK/PhJ m 37.6 7.1958 51.8341 23.3659
SJL/J m 9.2 7.1958 23.4341 -5.0341
SM/J m 21.75 5.6888 33.003 10.497
WSB/EiJ m 27.8 7.1958 42.0341 13.5659




  GWAS USING LINEAR MIXED MODELS