Project measure / variable:   Crowley1   subtlechew_d0

ID, description, units MPD:39437   subtlechew_d0   subtle chewing movements, 15 min test   [n]  on day 0  
haloperidol study
Data set, strains Crowley1   inbred w/CC8   27 strains     sex: m     age: 9-28wks
Procedure behavior observation
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  STRAIN COMPARISON PLOT
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Crowley1 - subtle chewing movements, 15 min test on day 0



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested27 strains
Mean of the strain means49.2   n
Median of the strain means46.0   n
SD of the strain means± 27.7
Coefficient of variation (CV)0.562
Min–max range of strain means14.1   –   116   n
Mean sample size per strain5.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 26 115677.1264 4449.1202 7.1735 < 0.0001
Residuals 132 81868.8484 620.2185


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 14.1 8.01   8 2.83 0.567 3.0, 25.0 -1.27
A/J m 39.8 24.0   5 10.7 0.604 13.0, 72.0 -0.34
AKR/J m 57.4 29.9   5 13.4 0.521 12.0, 90.0 0.3
BALB/cByJ m 16.8 6.94   5 3.1 0.413 5.0, 23.0 -1.17
BTBR T+ Itpr3tf/J m 17.8 11.3   8 3.99 0.637 5.0, 40.0 -1.14
C3H/HeJ m 54.6 26.2   5 11.7 0.48 26.0, 83.0 0.19
C57BL/6J m 56.0 36.6   5 16.4 0.654 19.0, 108.0 0.24
C57BLKS/J m 46.0 31.6   5 14.1 0.687 18.0, 94.0 -0.12
CAST/EiJ m 86.4 17.4   5 7.76 0.201 61.0, 108.0 1.34
CBA/J m 107.0 39.3   5 17.6 0.368 58.0, 156.0 2.09
DBA/2J m 25.1 14.8   9 4.93 0.589 9.0, 55.0 -0.87
DDY/JclSidSeyFrkJ m 49.4 24.0   7 9.07 0.486 20.0, 86.0 0.01
FVB/NJ m 46.2 33.5   5 15.0 0.725 13.0, 92.0 -0.11
KK/HlJ m 39.7 17.9   7 6.76 0.451 18.0, 64.0 -0.34
MA/MyJ m 24.7 15.9   6 6.48 0.643 6.0, 48.0 -0.89
MOLF/EiJ m 48.0 24.0   5 10.7 0.5 23.0, 75.0 -0.04
MRL/MpJ m 24.8 15.8   5 7.07 0.637 14.0, 52.0 -0.88
MSM/MsJ m 104.0 39.0   6 15.9 0.374 72.0, 179.0 1.98
NOD/ShiLtJ m 34.0 28.3   5 12.6 0.831 9.0, 77.0 -0.55
NON/ShiLtJ m 26.2 16.8   8 5.95 0.641 8.0, 53.0 -0.83
NZL/LtJ m 76.0 26.4   8 9.35 0.348 30.0, 127.0 0.97
NZO/HlLtJ m 32.0 4.83   4 2.42 0.151 28.0, 39.0 -0.62
NZW/LacJ m 116.0 54.4   5 24.3 0.47 46.0, 185.0 2.41
PWK/PhJ m 34.8 23.1   5 10.3 0.664 13.0, 64.0 -0.52
SJL/J m 58.8 24.7   5 11.0 0.42 32.0, 88.0 0.35
SM/J m 35.4 21.7   8 7.68 0.614 16.0, 82.0 -0.5
WSB/EiJ m 58.0 18.4   5 8.22 0.317 30.0, 78.0 0.32


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 14.125 8.805 31.5421 0.0
A/J m 39.8 11.1375 61.8311 17.7689
AKR/J m 57.4 11.1375 79.4311 35.3689
BALB/cByJ m 16.8 11.1375 38.8311 0.0
BTBR T+ Itpr3tf/J m 17.75 8.805 35.1671 0.3329
C3H/HeJ m 54.6 11.1375 76.6311 32.5689
C57BL/6J m 56.0 11.1375 78.0311 33.9689
C57BLKS/J m 46.0 11.1375 68.0311 23.9689
CAST/EiJ m 86.4 11.1375 108.4311 64.3689
CBA/J m 106.6 11.1375 128.6311 84.5689
DBA/2J m 25.1111 8.3014 41.5321 8.6901
DDY/JclSidSeyFrkJ m 49.4286 9.4129 68.0482 30.8089
FVB/NJ m 46.2 11.1375 68.2311 24.1689
KK/HlJ m 39.7143 9.4129 58.3339 21.0946
MA/MyJ m 24.6667 10.1671 44.7782 4.5552
MOLF/EiJ m 48.0 11.1375 70.0311 25.9689
MRL/MpJ m 24.8 11.1375 46.8311 2.7689
MSM/MsJ m 104.3333 10.1671 124.4448 84.2218
NOD/ShiLtJ m 34.0 11.1375 56.0311 11.9689
NON/ShiLtJ m 26.25 8.805 43.6671 8.8329
NZL/LtJ m 76.0 8.805 93.4171 58.5829
NZO/HlLtJ m 32.0 12.4521 56.6315 7.3685
NZW/LacJ m 115.8 11.1375 137.8311 93.7689
PWK/PhJ m 34.8 11.1375 56.8311 12.7689
SJL/J m 58.8 11.1375 80.8311 36.7689
SM/J m 35.375 8.805 52.7921 17.9579
WSB/EiJ m 58.0 11.1375 80.0311 35.9689




  GWAS USING LINEAR MIXED MODELS