Project measure / variable:   Crowley1   overtchew_d120

ID, description, units MPD:39436   overtchew_d120   overt chewing movements, 15 min test   [n]  on day 120  
haloperidol study
Data set, strains Crowley1   inbred w/CC8   26 strains     sex: m     age: 9-28wks
Procedure behavior observation
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  STRAIN COMPARISON PLOT
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Crowley1 - overt chewing movements, 15 min test on day 120



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested26 strains
Mean of the strain means42.1   n
Median of the strain means21.5   n
SD of the strain means± 33.5
Coefficient of variation (CV)0.795
Min–max range of strain means3.25   –   108   n
Mean sample size per strain5.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 25 146448.0814 5857.9233 5.477 < 0.0001
Residuals 122 130485.7294 1069.5552


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 11.4 17.9   8 6.34 1.58 -0.92
A/J m 55.6 55.0   5 24.6 0.989 3.0, 135.0 0.4
AKR/J m 80.2 45.4   5 20.3 0.566 12.0, 139.0 1.14
BALB/cByJ m 3.25 5.85   4 2.93 1.8 -1.16
BTBR T+ Itpr3tf/J m 6.62 5.71   8 2.02 0.861 -1.06
C3H/HeJ m 108.0 83.0   4 41.5 0.77 26.0, 209.0 1.97
C57BL/6J m 74.0 65.6   5 29.3 0.887 2.0, 157.0 0.95
C57BLKS/J m 97.2 58.6   5 26.2 0.603 49.0, 187.0 1.65
CAST/EiJ m 76.2 26.4   5 11.8 0.346 61.0, 123.0 1.02
CBA/J m 76.4 35.5   5 15.9 0.464 38.0, 123.0 1.03
DBA/2J m 47.6 30.6   9 10.2 0.644 10.0, 98.0 0.16
DDY/JclSidSeyFrkJ m 19.1 13.2   7 5.01 0.692 9.0, 45.0 -0.69
FVB/NJ m 20.2 13.6   5 6.06 0.671 -0.65
KK/HlJ m 10.9 10.8   7 4.09 0.997 1.0, 32.0 -0.93
MA/MyJ m 16.5 7.09   6 2.9 0.43 6.0, 25.0 -0.76
MOLF/EiJ m 12.2 4.82   5 2.15 0.395 4.0, 16.0 -0.89
MRL/MpJ m 15.0 12.5   5 5.61 0.837 3.0, 35.0 -0.81
MSM/MsJ m 11.0 9.57   5 4.28 0.87 -0.93
NOD/ShiLtJ m 18.6 23.4   5 10.5 1.26 -0.7
NON/ShiLtJ m 31.3 18.9   7 7.15 0.605 8.0, 56.0 -0.32
NZL/LtJ m 17.6 13.1   7 4.94 0.743 3.0, 43.0 -0.73
NZO/HlLtJ m 20.8 8.3   4 4.15 0.4 12.0, 32.0 -0.64
NZW/LacJ m 79.0 43.7   5 19.5 0.553 28.0, 123.0 1.1
PWK/PhJ m 22.2 9.26   5 4.14 0.417 13.0, 36.0 -0.59
SJL/J m 85.8 26.9   4 13.5 0.314 55.0, 120.0 1.31
SM/J m 77.5 54.9   8 19.4 0.708 21.0, 151.0 1.06


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 11.375 11.5626 34.2644 0.0
A/J m 55.6 14.6257 84.553 26.647
AKR/J m 80.2 14.6257 109.153 51.247
BALB/cByJ m 3.25 16.352 35.6205 0.0
BTBR T+ Itpr3tf/J m 6.625 11.5626 29.5144 0.0
C3H/HeJ m 107.75 16.352 140.1205 75.3795
C57BL/6J m 74.0 14.6257 102.953 45.047
C57BLKS/J m 97.2 14.6257 126.153 68.247
CAST/EiJ m 76.2 14.6257 105.153 47.247
CBA/J m 76.4 14.6257 105.353 47.447
DBA/2J m 47.5556 10.9014 69.1359 25.9752
DDY/JclSidSeyFrkJ m 19.1429 12.361 43.6126 0.0
FVB/NJ m 20.2 14.6257 49.153 0.0
KK/HlJ m 10.8571 12.361 35.3269 0.0
MA/MyJ m 16.5 13.3514 42.9304 0.0
MOLF/EiJ m 12.2 14.6257 41.153 0.0
MRL/MpJ m 15.0 14.6257 43.953 0.0
MSM/MsJ m 11.0 14.6257 39.953 0.0
NOD/ShiLtJ m 18.6 14.6257 47.553 0.0
NON/ShiLtJ m 31.2857 12.361 55.7555 6.8159
NZL/LtJ m 17.5714 12.361 42.0412 0.0
NZO/HlLtJ m 20.75 16.352 53.1205 0.0
NZW/LacJ m 79.0 14.6257 107.953 50.047
PWK/PhJ m 22.2 14.6257 51.153 0.0
SJL/J m 85.75 16.352 118.1205 53.3795
SM/J m 77.5 11.5626 100.3894 54.6106




  GWAS USING LINEAR MIXED MODELS