Project measure / variable:   Crowley1   overtchew_d30

ID, description, units MPD:39434   overtchew_d30   overt chewing movements, 15 min test   [n]  on day 30  
haloperidol study
Data set, strains Crowley1   inbred w/CC8   27 strains     sex: m     age: 9-28wks
Procedure behavior observation
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  STRAIN COMPARISON PLOT
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Crowley1 - overt chewing movements, 15 min test on day 30



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested27 strains
Mean of the strain means49.0   n
Median of the strain means45.9   n
SD of the strain means± 38.4
Coefficient of variation (CV)0.784
Min–max range of strain means2.88   –   190   n
Mean sample size per strain5.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 26 206697.3751 7949.899 6.0581 < 0.0001
Residuals 132 173221.6187 1312.285


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 13.1 14.4   8 5.1 1.1 2.0, 41.0 -0.94
A/J m 30.2 17.6   5 7.88 0.584 3.0, 52.0 -0.49
AKR/J m 54.4 28.7   5 12.8 0.527 7.0, 78.0 0.14
BALB/cByJ m 12.0 8.63   5 3.86 0.719 -0.96
BTBR T+ Itpr3tf/J m 2.88 4.26   8 1.51 1.48 -1.2
C3H/HeJ m 190.0 115.0   5 51.3 0.603 54.0, 352.0 3.67
C57BL/6J m 87.8 31.5   5 14.1 0.359 39.0, 119.0 1.01
C57BLKS/J m 114.0 56.8   5 25.4 0.5 49.0, 200.0 1.69
CAST/EiJ m 73.4 67.7   5 30.3 0.923 12.0, 187.0 0.63
CBA/J m 41.8 27.1   5 12.1 0.648 12.0, 83.0 -0.19
DBA/2J m 63.2 34.2   9 11.4 0.54 6.0, 107.0 0.37
DDY/JclSidSeyFrkJ m 29.4 23.8   7 8.99 0.808 -0.51
FVB/NJ m 65.8 54.4   5 24.3 0.827 15.0, 150.0 0.44
KK/HlJ m 23.1 18.7   7 7.09 0.81 10.0, 52.0 -0.67
MA/MyJ m 8.33 3.27   6 1.33 0.392 3.0, 12.0 -1.06
MOLF/EiJ m 6.8 1.3   5 0.583 0.192 6.0, 9.0 -1.1
MRL/MpJ m 51.0 34.8   5 15.6 0.682 7.0, 101.0 0.05
MSM/MsJ m 32.2 24.5   6 10.0 0.763 6.0, 73.0 -0.44
NOD/ShiLtJ m 47.0 32.6   5 14.6 0.694 3.0, 77.0 -0.05
NON/ShiLtJ m 46.0 28.8   8 10.2 0.626 14.0, 86.0 -0.08
NZL/LtJ m 45.9 22.4   8 7.92 0.488 19.0, 79.0 -0.08
NZO/HlLtJ m 38.0 17.6   4 8.82 0.464 12.0, 51.0 -0.29
NZW/LacJ m 78.4 48.5   5 21.7 0.618 17.0, 130.0 0.76
PWK/PhJ m 33.6 8.93   5 3.99 0.266 23.0, 44.0 -0.4
SJL/J m 48.8 39.8   5 17.8 0.816 8.0, 91.0 -0.01
SM/J m 56.8 31.2   8 11.0 0.55 16.0, 106.0 0.2
WSB/EiJ m 29.6 31.4   5 14.0 1.06 5.0, 76.0 -0.51


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 13.125 12.8076 38.4598 0.0
A/J m 30.2 16.2005 62.2462 0.0
AKR/J m 54.4 16.2005 86.4462 22.3538
BALB/cByJ m 12.0 16.2005 44.0462 0.0
BTBR T+ Itpr3tf/J m 2.875 12.8076 28.2098 0.0
C3H/HeJ m 190.4 16.2005 222.4462 158.3538
C57BL/6J m 87.8 16.2005 119.8462 55.7538
C57BLKS/J m 113.6 16.2005 145.6462 81.5538
CAST/EiJ m 73.4 16.2005 105.4462 41.3538
CBA/J m 41.8 16.2005 73.8462 9.7538
DBA/2J m 63.2222 12.0752 87.1081 39.3364
DDY/JclSidSeyFrkJ m 29.4286 13.6919 56.5126 2.3446
FVB/NJ m 65.8 16.2005 97.8462 33.7538
KK/HlJ m 23.1429 13.6919 50.2269 0.0
MA/MyJ m 8.3333 14.789 37.5874 0.0
MOLF/EiJ m 6.8 16.2005 38.8462 0.0
MRL/MpJ m 51.0 16.2005 83.0462 18.9538
MSM/MsJ m 32.1667 14.789 61.4207 2.9126
NOD/ShiLtJ m 47.0 16.2005 79.0462 14.9538
NON/ShiLtJ m 46.0 12.8076 71.3348 20.6652
NZL/LtJ m 45.875 12.8076 71.2098 20.5402
NZO/HlLtJ m 38.0 18.1127 73.8288 2.1712
NZW/LacJ m 78.4 16.2005 110.4462 46.3538
PWK/PhJ m 33.6 16.2005 65.6462 1.5538
SJL/J m 48.8 16.2005 80.8462 16.7538
SM/J m 56.75 12.8076 82.0848 31.4152
WSB/EiJ m 29.6 16.2005 61.6462 0.0




  GWAS USING LINEAR MIXED MODELS