Project measure / variable:   Crowley1   tongue_d60

ID, description, units MPD:39431   tongue_d60   tongue protrusions, 15 min test   [n]  on day 60  
haloperidol study
Data set, strains Crowley1   inbred w/CC8   27 strains     sex: m     age: 9-28wks
Procedure behavior observation
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  STRAIN COMPARISON PLOT
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Crowley1 - tongue protrusions, 15 min test on day 60



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested27 strains
Mean of the strain means11.9   n
Median of the strain means5.25   n
SD of the strain means± 15.3
Coefficient of variation (CV)1.29
Min–max range of strain means0   –   55.4   n
Mean sample size per strain5.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 26 36086.4532 1387.9405 5.0805 < 0.0001
Residuals 130 35514.5532 273.1889


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.625 1.06   8 0.375 1.7 -0.73
A/J m 18.8 11.1   5 4.97 0.592 6.0, 31.0 0.45
AKR/J m 4.2 4.76   5 2.13 1.13 -0.5
BALB/cByJ m 5.25 5.68   4 2.84 1.08 1.0, 13.0 -0.43
BTBR T+ Itpr3tf/J m 0.0 0.0   8 0.0 0.0 -0.78
C3H/HeJ m 6.25 6.7   4 3.35 1.07 1.0, 16.0 -0.37
C57BL/6J m 2.2 2.95   5 1.32 1.34 -0.63
C57BLKS/J m 0.0 0.0   5 0.0 0.0 -0.78
CAST/EiJ m 42.4 38.6   5 17.3 0.911 5.0, 91.0 1.99
CBA/J m 7.2 9.58   5 4.28 1.33 -0.31
DBA/2J m 20.6 33.1   9 11.0 1.61 0.57
DDY/JclSidSeyFrkJ m 3.57 6.88   7 2.6 1.93 -0.54
FVB/NJ m 2.4 2.88   5 1.29 1.2 -0.62
KK/HlJ m 0.0 0.0   7 0.0 0.0 -0.78
MA/MyJ m 0.667 1.63   6 0.667 2.45 -0.73
MOLF/EiJ m 7.6 7.5   5 3.36 0.987 1.0, 18.0 -0.28
MRL/MpJ m 0.0 0.0   5 0.0 0.0 -0.78
MSM/MsJ m 16.8 20.7   6 8.46 1.23 0.32
NOD/ShiLtJ m 3.8 4.49   5 2.01 1.18 -0.53
NON/ShiLtJ m 23.4 16.2   8 5.73 0.693 1.0, 49.0 0.75
NZL/LtJ m 3.25 5.04   8 1.78 1.55 -0.56
NZO/HlLtJ m 5.5 2.65   4 1.32 0.481 3.0, 9.0 -0.42
NZW/LacJ m 0.0 0.0   5 0.0 0.0 -0.78
PWK/PhJ m 55.4 22.2   5 9.91 0.4 21.0, 76.0 2.84
SJL/J m 17.4 29.1   5 13.0 1.67 0.36
SM/J m 45.8 35.6   8 12.6 0.778 7.0, 96.0 2.21
WSB/EiJ m 27.6 11.2   5 5.0 0.405 13.0, 40.0 1.03


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.625 5.8437 12.186 -10.936
A/J m 18.8 7.3917 33.4237 4.1763
AKR/J m 4.2 7.3917 18.8237 -10.4237
BALB/cByJ m 5.25 8.2642 21.5998 -11.0998
BTBR T+ Itpr3tf/J m 0.0 5.8437 11.561 -11.561
C3H/HeJ m 6.25 8.2642 22.5998 -10.0998
C57BL/6J m 2.2 7.3917 16.8237 -12.4237
C57BLKS/J m 0.0 7.3917 14.6237 -14.6237
CAST/EiJ m 42.4 7.3917 57.0237 27.7763
CBA/J m 7.2 7.3917 21.8237 -7.4237
DBA/2J m 20.5556 5.5095 31.4554 9.6557
DDY/JclSidSeyFrkJ m 3.5714 6.2472 15.9307 -8.7878
FVB/NJ m 2.4 7.3917 17.0237 -12.2237
KK/HlJ m 0.0 6.2472 12.3593 -12.3593
MA/MyJ m 0.6667 6.7477 14.0162 -12.6829
MOLF/EiJ m 7.6 7.3917 22.2237 -7.0237
MRL/MpJ m 0.0 7.3917 14.6237 -14.6237
MSM/MsJ m 16.8333 6.7477 30.1829 3.4838
NOD/ShiLtJ m 3.8 7.3917 18.4237 -10.8237
NON/ShiLtJ m 23.375 5.8437 34.936 11.814
NZL/LtJ m 3.25 5.8437 14.811 -8.311
NZO/HlLtJ m 5.5 8.2642 21.8498 -10.8498
NZW/LacJ m 0.0 7.3917 14.6237 -14.6237
PWK/PhJ m 55.4 7.3917 70.0237 40.7763
SJL/J m 17.4 7.3917 32.0237 2.7763
SM/J m 45.75 5.8437 57.311 34.189
WSB/EiJ m 27.6 7.3917 42.2237 12.9763




  GWAS USING LINEAR MIXED MODELS