Project measure / variable:   Crowley1   tongue_d30

ID, description, units MPD:39430   tongue_d30   tongue protrusions, 15 min test   [n]  on day 30  
haloperidol study
Data set, strains Crowley1   inbred w/CC8   27 strains     sex: m     age: 9-28wks
Procedure behavior observation
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  STRAIN COMPARISON PLOT
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Crowley1 - tongue protrusions, 15 min test on day 30



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested27 strains
Mean of the strain means12.1   n
Median of the strain means4.40   n
SD of the strain means± 18.9
Coefficient of variation (CV)1.56
Min–max range of strain means0   –   75.8   n
Mean sample size per strain5.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 26 70003.0355 2692.4244 3.0369 < 0.0001
Residuals 132 117026.8639 886.5672


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.0 0.0   8 0.0 0.0 -0.64
A/J m 12.8 17.5   5 7.81 1.36 0.04
AKR/J m 4.4 5.18   5 2.32 1.18 -0.41
BALB/cByJ m 2.4 4.83   5 2.16 2.01 -0.52
BTBR T+ Itpr3tf/J m 0.0 0.0   8 0.0 0.0 -0.64
C3H/HeJ m 13.6 11.1   5 4.97 0.816 2.0, 31.0 0.08
C57BL/6J m 1.6 1.34   5 0.6 0.839 -0.56
C57BLKS/J m 0.4 0.548   5 0.245 1.37 -0.62
CAST/EiJ m 19.4 26.2   5 11.7 1.35 3.0, 66.0 0.38
CBA/J m 5.8 5.4   5 2.42 0.932 -0.34
DBA/2J m 75.8 107.0   9 35.7 1.41 3.37
DDY/JclSidSeyFrkJ m 0.0 0.0   7 0.0 0.0 -0.64
FVB/NJ m 1.8 1.92   5 0.86 1.07 -0.55
KK/HlJ m 0.0 0.0   7 0.0 0.0 -0.64
MA/MyJ m 1.83 1.72   6 0.703 0.939 -0.55
MOLF/EiJ m 4.2 3.83   5 1.71 0.913 2.0, 11.0 -0.42
MRL/MpJ m 0.0 0.0   5 0.0 0.0 -0.64
MSM/MsJ m 6.0 7.35   6 3.0 1.22 -0.32
NOD/ShiLtJ m 8.4 10.6   5 4.74 1.26 -0.2
NON/ShiLtJ m 49.5 43.3   8 15.3 0.874 1.0, 111.0 1.98
NZL/LtJ m 4.88 3.76   8 1.33 0.771 -0.38
NZO/HlLtJ m 5.0 2.16   4 1.08 0.432 2.0, 7.0 -0.38
NZW/LacJ m 1.2 1.64   5 0.735 1.37 -0.58
PWK/PhJ m 46.2 25.8   5 11.5 0.559 20.0, 88.0 1.8
SJL/J m 2.4 4.34   5 1.94 1.81 -0.52
SM/J m 38.5 20.9   8 7.39 0.543 2.0, 63.0 1.4
WSB/EiJ m 21.4 11.8   5 5.26 0.55 10.0, 39.0 0.49


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.0 10.5272 20.8237 -20.8237
A/J m 12.8 13.3159 39.1402 -13.5402
AKR/J m 4.4 13.3159 30.7402 -21.9402
BALB/cByJ m 2.4 13.3159 28.7402 -23.9402
BTBR T+ Itpr3tf/J m 0.0 10.5272 20.8237 -20.8237
C3H/HeJ m 13.6 13.3159 39.9402 -12.7402
C57BL/6J m 1.6 13.3159 27.9402 -24.7402
C57BLKS/J m 0.4 13.3159 26.7402 -25.9402
CAST/EiJ m 19.4 13.3159 45.7402 -6.9402
CBA/J m 5.8 13.3159 32.1402 -20.5402
DBA/2J m 75.7778 9.9251 95.4106 56.145
DDY/JclSidSeyFrkJ m 0.0 11.254 22.2615 -22.2615
FVB/NJ m 1.8 13.3159 28.1402 -24.5402
KK/HlJ m 0.0 11.254 22.2615 -22.2615
MA/MyJ m 1.8333 12.1557 25.8785 -22.2119
MOLF/EiJ m 4.2 13.3159 30.5402 -22.1402
MRL/MpJ m 0.0 13.3159 26.3402 -26.3402
MSM/MsJ m 6.0 12.1557 30.0452 -18.0452
NOD/ShiLtJ m 8.4 13.3159 34.7402 -17.9402
NON/ShiLtJ m 49.5 10.5272 70.3237 28.6763
NZL/LtJ m 4.875 10.5272 25.6987 -15.9487
NZO/HlLtJ m 5.0 14.8876 34.4492 -24.4492
NZW/LacJ m 1.2 13.3159 27.5402 -25.1402
PWK/PhJ m 46.2 13.3159 72.5402 19.8598
SJL/J m 2.4 13.3159 28.7402 -23.9402
SM/J m 38.5 10.5272 59.3237 17.6763
WSB/EiJ m 21.4 13.3159 47.7402 -4.9402




  GWAS USING LINEAR MIXED MODELS