Phenotype measure:   Crowley1   stereotypy_d120

ID, description, units MPD:39424   stereotypy_d120   repetitive behavior, breaking of same beam, 60 min test   [n]  on day 120
haloperidol study
Data set, strains Crowley1   inbred w/CC8   26 strains     sex: m     age: 9-28wks
Procedure open field test
Ontology mappings

  STRAIN COMPARISON PLOT
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Crowley1 - repetitive behavior, breaking of same beam, 60 min test on day 120



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested26 strains
Mean of the strain means3722   n
Median of the strain means3458   n
SD of the strain means± 2087
Coefficient of variation (CV)0.561
Min–max range of strain means496   –   7441   n
Mean sample size per strain5.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 25 656977131.8372 26279085.2735 9.664 < 0.0001
Residuals 122 331750516.352 2719266.5275


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 590.0 306.0   8 108.0 0.519 383.0, 1324.0 -1.5
A/J m 1047.0 482.0   5 215.0 0.46 515.0, 1743.0 -1.28
AKR/J m 4483.0 3613.0   5 1616.0 0.806 1846.0, 9841.0 0.36
BALB/cByJ m 3704.0 3731.0   4 1866.0 1.01 1550.0, 9280.0 -0.01
BTBR T+ Itpr3tf/J m 3190.0 831.0   8 294.0 0.26 1973.0, 4047.0 -0.26
C3H/HeJ m 2390.0 666.0   4 333.0 0.279 1408.0, 2885.0 -0.64
C57BL/6J m 5140.0 1228.0   5 549.0 0.239 3886.0, 6734.0 0.68
C57BLKS/J m 2767.0 570.0   5 255.0 0.206 1993.0, 3543.0 -0.46
CAST/EiJ m 5828.0 1512.0   5 676.0 0.259 3491.0, 7327.0 1.01
CBA/J m 3177.0 756.0   5 338.0 0.238 2109.0, 3952.0 -0.26
DBA/2J m 6839.0 1727.0   9 576.0 0.253 4466.0, 9841.0 1.49
DDY/JclSidSeyFrkJ m 3213.0 2358.0   7 891.0 0.734 864.0, 7833.0 -0.24
FVB/NJ m 7441.0 1014.0   5 454.0 0.136 6310.0, 8932.0 1.78
KK/HlJ m 4376.0 1938.0   7 733.0 0.443 2359.0, 7760.0 0.31
MA/MyJ m 6068.0 2556.0   6 1043.0 0.421 2871.0, 9455.0 1.12
MOLF/EiJ m 1742.0 346.0   5 155.0 0.199 1330.0, 2144.0 -0.95
MRL/MpJ m 3789.0 1058.0   5 473.0 0.279 2653.0, 5219.0 0.03
MSM/MsJ m 2752.0 993.0   5 444.0 0.361 1400.0, 3811.0 -0.46
NOD/ShiLtJ m 6243.0 1186.0   5 530.0 0.19 4837.0, 8039.0 1.21
NON/ShiLtJ m 5679.0 3155.0   7 1192.0 0.556 1886.0, 9403.0 0.94
NZL/LtJ m 1787.0 787.0   7 298.0 0.44 515.0, 3005.0 -0.93
NZO/HlLtJ m 496.0 149.0   4 74.4 0.3 352.0, 692.0 -1.55
NZW/LacJ m 1228.0 403.0   5 180.0 0.328 759.0, 1738.0 -1.2
PWK/PhJ m 1634.0 520.0   5 233.0 0.318 775.0, 2123.0 -1.0
SJL/J m 3987.0 522.0   4 261.0 0.131 3568.0, 4713.0 0.13
SM/J m 7190.0 1422.0   8 503.0 0.198 4909.0, 9403.0 1.66


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 590.0 583.0166 1744.1395 0.0
A/J m 1047.2 737.4641 2507.0839 0.0
AKR/J m 4483.4 737.4641 5943.2839 3023.5161
BALB/cByJ m 3703.5 824.5099 5335.6998 2071.3002
BTBR T+ Itpr3tf/J m 3190.0 583.0166 4344.1395 2035.8605
C3H/HeJ m 2390.0 824.5099 4022.1998 757.8002
C57BL/6J m 5140.4 737.4641 6600.2839 3680.5161
C57BLKS/J m 2767.0 737.4641 4226.8839 1307.1161
CAST/EiJ m 5828.2 737.4641 7288.0839 4368.3161
CBA/J m 3177.4 737.4641 4637.2839 1717.5161
DBA/2J m 6838.5556 549.6733 7926.6887 5750.4224
DDY/JclSidSeyFrkJ m 3212.7143 623.2709 4446.5413 1978.8872
FVB/NJ m 7441.4 737.4641 8901.2839 5981.5161
KK/HlJ m 4376.2857 623.2709 5610.1128 3142.4587
MA/MyJ m 6068.3333 673.2095 7401.0189 4735.6478
MOLF/EiJ m 1741.6 737.4641 3201.4839 281.7161
MRL/MpJ m 3788.8 737.4641 5248.6839 2328.9161
MSM/MsJ m 2751.6 737.4641 4211.4839 1291.7161
NOD/ShiLtJ m 6243.2 737.4641 7703.0839 4783.3161
NON/ShiLtJ m 5678.5714 623.2709 6912.3985 4444.7444
NZL/LtJ m 1787.0 623.2709 3020.827 553.173
NZO/HlLtJ m 496.0 824.5099 2128.1998 0.0
NZW/LacJ m 1227.6 737.4641 2687.4839 0.0
PWK/PhJ m 1634.0 737.4641 3093.8839 174.1161
SJL/J m 3987.25 824.5099 5619.4498 2355.0502
SM/J m 7190.125 583.0166 8344.2645 6035.9855




  GWAS USING LINEAR MIXED MODELS