Project measure / variable:   Gupta2   pct_kidneys

ID, description, units MPD:39208   pct_kidneys   percent kidney weight to body weight   [%]  both  
Data set, strains Gupta2   BXH   10 strains     sex: both     age: postnatal d1
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Gupta2 - percent kidney weight to body weight both



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means0.957   % 0.953   %
Median of the strain means0.970   % 0.948   %
SD of the strain means± 0.0640 ± 0.0964
Coefficient of variation (CV)0.0669 0.101
Min–max range of strain means0.852   –   1.07   % 0.811   –   1.10   %
Mean sample size per strain12.9   mice 14.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0106 0.0106 0.6718 0.4132
strain 9 1.2864 0.1429 9.0592 < 0.0001
sex:strain 9 0.1356 0.0151 0.9553 0.4778
Residuals 254 4.0075 0.0158


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXH10/TyJ f 1.02 0.0977   13 0.0271 0.0959 0.91, 1.25 0.99
BXH10/TyJ m 1.07 0.0943   14 0.0252 0.0885 0.904, 1.21 1.22
BXH11/TyJ f 0.972 0.0923   7 0.0349 0.095 0.799, 1.08 0.24
BXH11/TyJ m 1.1 0.0606   6 0.0247 0.0552 1.04, 1.19 1.53
BXH14/TyJ f 0.896 0.193   15 0.0499 0.216 0.408, 1.35 -0.95
BXH14/TyJ m 0.898 0.132   16 0.0329 0.147 0.459, 1.03 -0.57
BXH19/TyJ f 0.891 0.12   23 0.0251 0.135 0.68, 1.21 -1.02
BXH19/TyJ m 0.811 0.0838   11 0.0253 0.103 0.627, 0.906 -1.47
BXH2/TyJ f 0.97 0.122   8 0.0431 0.126 0.773, 1.12 0.21
BXH2/TyJ m 0.953 0.0899   12 0.0259 0.0944 0.805, 1.08 0.01
BXH4/TyJ f 1.07 0.199   15 0.0514 0.186 0.896, 1.6 1.77
BXH4/TyJ m 1.04 0.161   11 0.0485 0.155 0.857, 1.45 0.91
BXH6/TyJ f 0.97 0.0938   15 0.0242 0.0967 0.828, 1.14 0.21
BXH6/TyJ m 0.942 0.117   15 0.0302 0.124 0.667, 1.11 -0.11
BXH7/TyJ f 0.852 0.0886   9 0.0295 0.104 0.745, 0.989 -1.63
BXH7/TyJ m 0.822 0.139   16 0.0349 0.17 0.594, 1.0 -1.35
BXH8/TyJ f 0.977 0.0986   10 0.0312 0.101 0.812, 1.12 0.32
BXH8/TyJ m 0.935 0.157   19 0.036 0.168 0.43, 1.11 -0.18
BXH9/TyJ f 0.948 0.101   18 0.0238 0.106 0.781, 1.14 -0.13
BXH9/TyJ m 0.954 0.0876   21 0.0191 0.0919 0.748, 1.16 0.02


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXH10/TyJ f 1.0183 0.0348 1.0869 0.9497
BXH10/TyJ m 1.0657 0.0336 1.1318 0.9996
BXH11/TyJ f 0.9716 0.0475 1.0651 0.8781
BXH11/TyJ m 1.0967 0.0513 1.1977 0.9957
BXH14/TyJ f 0.8959 0.0324 0.9597 0.832
BXH14/TyJ m 0.8982 0.0314 0.9601 0.8364
BXH19/TyJ f 0.8908 0.0262 0.9424 0.8392
BXH19/TyJ m 0.8114 0.0379 0.8859 0.7368
BXH2/TyJ f 0.97 0.0444 1.0575 0.8825
BXH2/TyJ m 0.9526 0.0363 1.024 0.8812
BXH4/TyJ f 1.071 0.0324 1.1349 1.0071
BXH4/TyJ m 1.0378 0.0379 1.1124 0.9632
BXH6/TyJ f 0.9703 0.0324 1.0341 0.9064
BXH6/TyJ m 0.9421 0.0324 1.0059 0.8782
BXH7/TyJ f 0.8517 0.0419 0.9341 0.7692
BXH7/TyJ m 0.8222 0.0314 0.884 0.7603
BXH8/TyJ f 0.9771 0.0397 1.0553 0.8989
BXH8/TyJ m 0.9348 0.0288 0.9916 0.8781
BXH9/TyJ f 0.9479 0.0296 1.0062 0.8896
BXH9/TyJ m 0.9536 0.0274 1.0076 0.8996


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXH10/TyJ both 1.042 0.0242 1.0896 0.9944
BXH11/TyJ both 1.0341 0.0349 1.1029 0.9653
BXH14/TyJ both 0.8971 0.0226 0.9415 0.8526
BXH19/TyJ both 0.8511 0.023 0.8964 0.8057
BXH2/TyJ both 0.9613 0.0287 1.0177 0.9048
BXH4/TyJ both 1.0544 0.0249 1.1035 1.0053
BXH6/TyJ both 0.9562 0.0229 1.0013 0.911
BXH7/TyJ both 0.8369 0.0262 0.8885 0.7854
BXH8/TyJ both 0.956 0.0245 1.0043 0.9077
BXH9/TyJ both 0.9508 0.0202 0.9905 0.9111




  GWAS USING LINEAR MIXED MODELS