Project measure / variable:   Gupta2   kidneyL

ID, description, units MPD:39202   kidneyL   kidney weight   [g]  left  
Data set, strains Gupta2   BXH   10 strains     sex: both     age: postnatal d1
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Gupta2 - kidney weight left



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means0.00648   g 0.00671   g
Median of the strain means0.00641   g 0.00671   g
SD of the strain means± 0.000606 ± 0.000692
Coefficient of variation (CV)0.0935 0.103
Min–max range of strain means0.00560   –   0.00744   g 0.00536   –   0.00757   g
Mean sample size per strain12.9   mice 14.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0 0.0 3.1205 0.0785
strain 9 0.0001 0.0 5.6826 < 0.0001
sex:strain 9 0.0 0.0 0.55 0.8369
Residuals 253 0.0004 0.0


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXH10/TyJ f 0.00655 0.000701   13 0.000194 0.107 0.005, 0.0077 0.11
BXH10/TyJ m 0.0067 0.0015   14 0.000402 0.225 0.0044, 0.0097 -0.02
BXH11/TyJ f 0.00636 0.00123   7 0.000466 0.194 0.0045, 0.0076 -0.2
BXH11/TyJ m 0.00757 0.000753   6 0.000307 0.0995 0.0065, 0.0086 1.24
BXH14/TyJ f 0.00645 0.00231   15 0.000596 0.358 0.0041, 0.0143 -0.05
BXH14/TyJ m 0.00672 0.000817   15 0.000211 0.122 0.0054, 0.0081 0.01
BXH19/TyJ f 0.0056 0.00105   23 0.00022 0.188 0.0042, 0.0078 -1.45
BXH19/TyJ m 0.00536 0.000774   11 0.000233 0.144 0.004, 0.0063 -1.96
BXH2/TyJ f 0.00686 0.00177   8 0.000627 0.259 0.0051, 0.0096 0.63
BXH2/TyJ m 0.00712 0.00175   12 0.000506 0.246 0.0045, 0.01 0.59
BXH4/TyJ f 0.00738 0.00195   15 0.000503 0.264 0.0051, 0.0124 1.48
BXH4/TyJ m 0.00745 0.00139   11 0.00042 0.187 0.0058, 0.0097 1.07
BXH6/TyJ f 0.00631 0.00116   15 0.000299 0.183 0.0041, 0.0077 -0.28
BXH6/TyJ m 0.00625 0.000999   15 0.000258 0.16 0.0039, 0.0075 -0.67
BXH7/TyJ f 0.0059 0.00131   9 0.000436 0.221 0.004, 0.0078 -0.96
BXH7/TyJ m 0.00602 0.0015   16 0.000376 0.25 0.0035, 0.0088 -1.0
BXH8/TyJ f 0.00744 0.0015   10 0.000474 0.202 0.0055, 0.0104 1.58
BXH8/TyJ m 0.00729 0.00117   19 0.000268 0.16 0.0048, 0.0092 0.83
BXH9/TyJ f 0.00596 0.000738   18 0.000174 0.124 0.0045, 0.0072 -0.86
BXH9/TyJ m 0.00665 0.000859   21 0.000187 0.129 0.0054, 0.0083 -0.09


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXH10/TyJ f 0.0066 0.0004 0.0073 0.0058
BXH10/TyJ m 0.0067 0.0004 0.0074 0.006
BXH11/TyJ f 0.0064 0.0005 0.0073 0.0054
BXH11/TyJ m 0.0076 0.0005 0.0086 0.0065
BXH14/TyJ f 0.0065 0.0003 0.0071 0.0058
BXH14/TyJ m 0.0067 0.0003 0.0074 0.0061
BXH19/TyJ f 0.0056 0.0003 0.0061 0.0051
BXH19/TyJ m 0.0054 0.0004 0.0061 0.0046
BXH2/TyJ f 0.0069 0.0005 0.0078 0.0059
BXH2/TyJ m 0.0071 0.0004 0.0079 0.0064
BXH4/TyJ f 0.0074 0.0003 0.008 0.0067
BXH4/TyJ m 0.0074 0.0004 0.0082 0.0067
BXH6/TyJ f 0.0063 0.0003 0.007 0.0056
BXH6/TyJ m 0.0062 0.0003 0.0069 0.0056
BXH7/TyJ f 0.0059 0.0004 0.0068 0.005
BXH7/TyJ m 0.006 0.0003 0.0067 0.0054
BXH8/TyJ f 0.0074 0.0004 0.0083 0.0066
BXH8/TyJ m 0.0073 0.0003 0.0079 0.0067
BXH9/TyJ f 0.006 0.0003 0.0066 0.0053
BXH9/TyJ m 0.0066 0.0003 0.0072 0.0061


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXH10/TyJ both 0.0066 0.0003 0.0071 0.0061
BXH11/TyJ both 0.007 0.0004 0.0077 0.0062
BXH14/TyJ both 0.0066 0.0002 0.0071 0.0061
BXH19/TyJ both 0.0055 0.0002 0.006 0.005
BXH2/TyJ both 0.007 0.0003 0.0076 0.0064
BXH4/TyJ both 0.0074 0.0003 0.0079 0.0069
BXH6/TyJ both 0.0063 0.0002 0.0068 0.0058
BXH7/TyJ both 0.006 0.0003 0.0065 0.0054
BXH8/TyJ both 0.0074 0.0003 0.0079 0.0069
BXH9/TyJ both 0.0063 0.0002 0.0067 0.0059




  GWAS USING LINEAR MIXED MODELS