Project measure / variable:   Gupta1   pct_kidneys

ID, description, units MPD:39108   pct_kidneys   percent kidney weight to body weight   [%]  both  
Data set, strains Gupta1   inbred   7 strains     sex: both     age: postnatal d1
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Gupta1 - percent kidney weight to body weight both



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested7 strains7 strains
Mean of the strain means1.01   % 0.989   %
Median of the strain means1.01   % 1.02   %
SD of the strain means± 0.0483 ± 0.0754
Coefficient of variation (CV)0.0477 0.0762
Min–max range of strain means0.961   –   1.10   % 0.868   –   1.07   %
Mean sample size per strain7.9   mice 9.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0094 0.0094 0.998 0.32
strain 6 0.2955 0.0493 5.2067 0.0001
sex:strain 6 0.0404 0.0067 0.7114 0.6411
Residuals 108 1.0217 0.0095


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.965 0.0975   10 0.0308 0.101 0.807, 1.1 -0.97
129S1/SvImJ m 0.868 0.0719   7 0.0272 0.0829 0.746, 0.959 -1.61
AKR/J f 1.04 0.075   4 0.0375 0.0724 0.956, 1.11 0.58
AKR/J m 1.04 0.0753   15 0.0194 0.0723 0.888, 1.15 0.67
CBA/J f 0.988 0.135   4 0.0674 0.136 0.904, 1.19 -0.5
CBA/J m 0.955 0.114   9 0.0379 0.119 0.829, 1.14 -0.45
DBA/2J f 1.01 0.0557   5 0.0249 0.055 0.924, 1.07 -0.04
DBA/2J m 1.07 0.0294   2   0.0208 0.0274 1.05, 1.09 1.07
FVB/NJ f 0.961 0.134   18 0.0315 0.139 0.659, 1.15 -1.06
FVB/NJ m 0.922 0.0769   20 0.0172 0.0835 0.732, 1.07 -0.89
SJL/J f 1.1 0.157   2   0.111 0.143 0.99, 1.21 1.82
SJL/J m 1.05 0.0335   3 0.0193 0.0317 1.03, 1.09 0.81
SM/J f 1.02 0.0719   12 0.0208 0.0705 0.917, 1.14 0.17
SM/J m 1.02 0.118   11 0.0354 0.115 0.905, 1.25 0.41


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.9651 0.0308 1.0261 0.9041
129S1/SvImJ m 0.8679 0.0368 0.9407 0.795
AKR/J f 1.0364 0.0486 1.1328 0.94
AKR/J m 1.0422 0.0251 1.092 0.9924
CBA/J f 0.9883 0.0486 1.0846 0.8919
CBA/J m 0.9554 0.0324 1.0197 0.8911
DBA/2J f 1.0135 0.0435 1.0997 0.9272
DBA/2J m 1.0741 0.0688 1.2104 0.9378
FVB/NJ f 0.9606 0.0229 1.0061 0.9152
FVB/NJ m 0.9217 0.0217 0.9648 0.8786
SJL/J f 1.1013 0.0688 1.2376 0.9649
SJL/J m 1.055 0.0562 1.1663 0.9437
SM/J f 1.0192 0.0281 1.0749 0.9636
SM/J m 1.0185 0.0293 1.0766 0.9603


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.9165 0.024 0.964 0.869
AKR/J both 1.0393 0.0274 1.0935 0.985
CBA/J both 0.9718 0.0292 1.0298 0.9139
DBA/2J both 1.0438 0.0407 1.1244 0.9631
FVB/NJ both 0.9412 0.0158 0.9725 0.9098
SJL/J both 1.0781 0.0444 1.1661 0.9901
SM/J both 1.0188 0.0203 1.0591 0.9786




  GWAS USING LINEAR MIXED MODELS