Project measure / variable:   Gupta1   kidneys

ID, description, units MPD:39104   kidneys   kidney weight   [g]  both  
Data set, strains Gupta1   inbred   7 strains     sex: both     age: postnatal d1
Procedure organ weights
Ontology mappings

  STRAIN COMPARISON PLOT
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Gupta1 - kidney weight both



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested7 strains7 strains
Mean of the strain means0.0139   g 0.0142   g
Median of the strain means0.0137   g 0.0143   g
SD of the strain means± 0.00132 ± 0.000706
Coefficient of variation (CV)0.0951 0.0498
Min–max range of strain means0.0124   –   0.0157   g 0.0134   –   0.0151   g
Mean sample size per strain7.9   mice 9.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0 0.0 0.8126 0.3694
strain 6 0.0001 0.0 3.3133 0.0049
sex:strain 6 0.0 0.0 0.7269 0.6289
Residuals 108 0.0004 0.0


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.0155 0.00204   10 0.000644 0.132 0.0119, 0.0187 1.25
129S1/SvImJ m 0.0143 0.002   7 0.000756 0.14 0.0121, 0.0177 0.18
AKR/J f 0.014 0.00238   4 0.00119 0.171 0.0117, 0.0168 0.11
AKR/J m 0.0151 0.00175   15 0.000452 0.116 0.0112, 0.0177 1.31
CBA/J f 0.0126 0.00131   4 0.000655 0.104 0.0118, 0.0146 -0.95
CBA/J m 0.0134 0.00217   9 0.000725 0.162 0.0104, 0.0166 -1.09
DBA/2J f 0.0124 0.00104   5 0.000463 0.0833 0.0115, 0.0137 -1.11
DBA/2J m 0.0143 0.000919   2   0.00065 0.0641 0.0137, 0.015 0.18
FVB/NJ f 0.0131 0.00262   18 0.000617 0.201 0.0077, 0.017 -0.57
FVB/NJ m 0.0134 0.00205   20 0.000457 0.153 0.0097, 0.0181 -1.09
SJL/J f 0.0157 0.0017   2   0.0012 0.108 0.0145, 0.0169 1.4
SJL/J m 0.015 0.000404   3 0.000233 0.0269 0.0148, 0.0155 1.17
SM/J f 0.0137 0.00101   12 0.000292 0.0739 0.012, 0.015 -0.12
SM/J m 0.0137 0.00212   11 0.000638 0.154 0.0112, 0.017 -0.67


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.0155 0.0006 0.0167 0.0142
129S1/SvImJ m 0.0143 0.0007 0.0158 0.0128
AKR/J f 0.0139 0.001 0.0159 0.012
AKR/J m 0.0151 0.0005 0.0162 0.0141
CBA/J f 0.0126 0.001 0.0146 0.0107
CBA/J m 0.0134 0.0007 0.0148 0.0121
DBA/2J f 0.0124 0.0009 0.0142 0.0107
DBA/2J m 0.0143 0.0014 0.0171 0.0116
FVB/NJ f 0.0131 0.0005 0.014 0.0121
FVB/NJ m 0.0134 0.0004 0.0142 0.0125
SJL/J f 0.0157 0.0014 0.0185 0.0129
SJL/J m 0.015 0.0011 0.0173 0.0128
SM/J f 0.0137 0.0006 0.0148 0.0125
SM/J m 0.0137 0.0006 0.0149 0.0125


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.0149 0.0005 0.0159 0.0139
AKR/J both 0.0145 0.0006 0.0157 0.0134
CBA/J both 0.013 0.0006 0.0142 0.0119
DBA/2J both 0.0134 0.0008 0.015 0.0118
FVB/NJ both 0.0132 0.0003 0.0138 0.0126
SJL/J both 0.0154 0.0009 0.0172 0.0136
SM/J both 0.0137 0.0004 0.0145 0.0129




  GWAS USING LINEAR MIXED MODELS