Project measure / variable:   Gros1   C5_allele

ID, description, units MPD:38503   C5_allele   C5 allele (0=deficient, 1=sufficient)   [designation]  
Data set, strains Gros1   inbred   36 strains     sex: f     age: 8-12wks
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  STRAIN COMPARISON PLOT
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Gros1 - C5 allele (0=deficient, 1=sufficient)



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested36 strains
Mean of the strain means0.722   designation
Median of the strain means1.00   designation
SD of the strain means± 0.454
Coefficient of variation (CV)0.629
Min–max range of strain means0   –   1.00   designation
Mean sample size per strain6.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 22 47.0769 2.1399 1.95702066859532e+31 < 0.0001
Residuals 185 0.0 0.0


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1.0 0.0   10 0.0 0.0 1.0, 1.0 0.61
A/J f 0.0 0.0   9 0.0 0.0 -1.59
AKR/J f 0.0 0.0   13 0.0 0.0 -1.59
BALB/cByJ f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.61
BPL/1J f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.61
BTBR T+ Itpr3tf/J f 0.0 0.0   10 0.0 0.0 -1.59
BUB/BnJ f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.61
C3H/HeJ f 1.0 0.0   10 0.0 0.0 1.0, 1.0 0.61
C57BL/6J f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.61
C57BLKS/J f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.61
C57BR/cdJ f 1.0 0.0   1   0.0 0.0 1.0, 1.0 0.61
C57L/J f 1.0 0.0   1   0.0 0.0 1.0, 1.0 0.61
C58/J f 1.0 0.0   1   0.0 0.0 1.0, 1.0 0.61
CAST/EiJ f 1.0 0.0   10 0.0 0.0 1.0, 1.0 0.61
CBA/J f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.61
CZECHII/EiJ f 1.0 0.0   1   0.0 0.0 1.0, 1.0 0.61
DBA/2J f 0.0 0.0   10 0.0 0.0 -1.59
DDY/JclSidSeyFrkJ f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.61
FVB/NJ f 0.0 0.0   10 0.0 0.0 -1.59
KK/HlJ f 0.0 0.0   10 0.0 0.0 -1.59
LP/J f 1.0 0.0   1   0.0 0.0 1.0, 1.0 0.61
MA/MyJ f 1.0 0.0   1   0.0 0.0 1.0, 1.0 0.61
MOLF/EiJ f 0.0 0.0   1   0.0 0.0 -1.59
MRL/MpJ f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.61
MSM/MsJ f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.61
NOD/ShiLtJ f 0.0 0.0   10 0.0 0.0 -1.59
NON/ShiLtJ f 0.0 0.0   1   0.0 0.0 -1.59
NZL/LtJ f 1.0 0.0   1   0.0 0.0 1.0, 1.0 0.61
NZW/LacJ f 1.0 0.0   10 0.0 0.0 1.0, 1.0 0.61
PL/J f 1.0 0.0   1   0.0 0.0 1.0, 1.0 0.61
PWD/PhJ f 1.0 0.0   9 0.0 0.0 1.0, 1.0 0.61
RIIIS/J f 1.0 0.0   1   0.0 0.0 1.0, 1.0 0.61
SJL/J f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.61
SM/J f 1.0 0.0   7 0.0 0.0 1.0, 1.0 0.61
SWR/J f 0.0 0.0   1   0.0 0.0 -1.59
WSB/EiJ f 1.0 0.0   1   0.0 0.0 1.0, 1.0 0.61


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1.0 0.0 1.0 1.0
A/J f 0.0 0.0 0.0 0.0
AKR/J f 0.0 0.0 0.0 0.0
BALB/cByJ f 1.0 0.0 1.0 1.0
BPL/1J f 1.0 0.0 1.0 1.0
BTBR T+ Itpr3tf/J f 0.0 0.0 0.0 0.0
BUB/BnJ f 1.0 0.0 1.0 1.0
C3H/HeJ f 1.0 0.0 1.0 1.0
C57BL/6J f 1.0 0.0 1.0 1.0
C57BLKS/J f 1.0 0.0 1.0 1.0
CAST/EiJ f 1.0 0.0 1.0 1.0
CBA/J f 1.0 0.0 1.0 1.0
DBA/2J f 0.0 0.0 0.0 0.0
DDY/JclSidSeyFrkJ f 1.0 0.0 1.0 1.0
FVB/NJ f 0.0 0.0 0.0 0.0
KK/HlJ f 0.0 0.0 0.0 0.0
MRL/MpJ f 1.0 0.0 1.0 1.0
MSM/MsJ f 1.0 0.0 1.0 1.0
NOD/ShiLtJ f 0.0 0.0 0.0 0.0
NZW/LacJ f 1.0 0.0 1.0 1.0
PWD/PhJ f 1.0 0.0 1.0 1.0
SJL/J f 1.0 0.0 1.0 1.0
SM/J f 1.0 0.0 1.0 1.0




  GWAS USING LINEAR MIXED MODELS