Project measure / variable:   Wiltshire2   OFT_thig_cont

ID, description, units MPD:38003   OFT_thig_cont   OFT center avoidance, thigmotaxis, 10 min test   [%]  control  
fluoxetine study
Data set, strains Wiltshire2   inbred   30 strains     sex: m     age: 10-11wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Wiltshire2 - OFT center avoidance, thigmotaxis, 10 min test control



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested30 strains
Mean of the strain means86.2   %
Median of the strain means87.7   %
SD of the strain means± 7.17
Coefficient of variation (CV)0.0832
Min–max range of strain means67.8   –   99.8   %
Mean sample size per strain10.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 29 17730.1659 611.385 12.0038 < 0.0001
Residuals 294 14974.2065 50.9327


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 96.2 11.4   15 2.95 0.119 55.5, 100.0 1.39
A/J m 99.8 0.63   12 0.182 0.00632 97.8, 100.0 1.9
AKR/J m 88.2 5.43   9 1.81 0.0616 78.3, 94.7 0.28
BALB/cJ m 92.2 11.6   9 3.88 0.126 70.2, 100.0 0.84
BTBR T+ Itpr3tf/J m 90.6 5.55   9 1.85 0.0613 81.7, 97.8 0.61
BUB/BnJ m 81.3 6.59   8 2.33 0.081 70.7, 91.3 -0.68
C3H/HeJ m 89.2 4.41   15 1.14 0.0494 82.2, 95.3 0.42
C57BL/6J m 87.2 6.25   12 1.8 0.0717 75.5, 95.7 0.14
C57BLKS/J m 93.5 3.2   10 1.01 0.0343 89.5, 99.7 1.02
C57BR/cdJ m 67.8 10.2   15 2.63 0.15 53.3, 86.5 -2.57
C58/J m 79.3 7.95   9 2.65 0.1 68.8, 89.2 -0.96
CBA/J m 88.3 7.42   15 1.92 0.0841 68.8, 98.3 0.29
CE/J m 86.8 5.99   9 2.0 0.069 73.8, 93.0 0.08
DBA/2J m 94.4 4.13   18 0.973 0.0437 83.7, 100.0 1.14
FVB/NJ m 77.3 3.39   9 1.13 0.0438 74.2, 84.0 -1.24
I/LnJ m 89.9 4.72   11 1.42 0.0525 80.3, 95.2 0.52
LG/J m 85.7 8.85   11 2.67 0.103 71.3, 97.2 -0.07
LP/J m 90.7 13.7   9 4.56 0.151 56.0, 99.5 0.63
MA/MyJ m 78.1 6.27   9 2.09 0.0803 68.7, 89.0 -1.13
MRL/MpJ m 82.0 6.3   11 1.9 0.0769 67.7, 89.0 -0.59
NOD/ShiLtJ m 72.6 10.3   11 3.11 0.142 55.0, 82.8 -1.9
NOR/LtJ m 75.8 5.72   8 2.02 0.0755 68.3, 86.0 -1.45
NZB/BlNJ m 94.4 3.85   11 1.16 0.0408 88.3, 99.5 1.14
NZW/LacJ m 87.3 3.82   9 1.27 0.0438 80.0, 92.2 0.15
P/J m 80.9 10.1   9 3.38 0.125 61.2, 94.2 -0.74
PL/J m 88.1 2.71   12 0.783 0.0308 83.2, 92.7 0.26
RIIIS/J m 88.4 2.04   9 0.679 0.023 84.0, 90.8 0.31
SJL/J m 87.0 11.6   10 3.68 0.134 61.5, 99.8 0.11
SM/J m 88.2 2.77   8 0.978 0.0314 83.3, 91.8 0.28
SWR/J m 84.8 3.12   12 0.902 0.0368 80.3, 90.3 -0.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 96.1667 1.8427 99.7932 92.5401
A/J m 99.7917 2.0602 103.8463 95.7371
AKR/J m 88.1778 2.3789 92.8596 83.4959
BALB/cJ m 92.1889 2.3789 96.8707 87.507
BTBR T+ Itpr3tf/J m 90.6111 2.3789 95.293 85.9293
BUB/BnJ m 81.35 2.5232 86.3158 76.3842
C3H/HeJ m 89.1667 1.8427 92.7932 85.5401
C57BL/6J m 87.1583 2.0602 91.2129 83.1037
C57BLKS/J m 93.54 2.2568 97.9816 89.0984
C57BR/cdJ m 67.82 1.8427 71.4465 64.1935
C58/J m 79.2778 2.3789 83.9596 74.5959
CBA/J m 88.26 1.8427 91.8865 84.6335
CE/J m 86.7889 2.3789 91.4707 82.107
DBA/2J m 94.3611 1.6821 97.6717 91.0506
FVB/NJ m 77.3444 2.3789 82.0263 72.6626
I/LnJ m 89.8636 2.1518 94.0985 85.6288
LG/J m 85.6818 2.1518 89.9167 81.4469
LP/J m 90.6556 2.3789 95.3374 85.9737
MA/MyJ m 78.0667 2.3789 82.7485 73.3848
MRL/MpJ m 82.0182 2.1518 86.2531 77.7833
NOD/ShiLtJ m 72.5636 2.1518 76.7985 68.3288
NOR/LtJ m 75.8125 2.5232 80.7783 70.8467
NZB/BlNJ m 94.4182 2.1518 98.6531 90.1833
NZW/LacJ m 87.2889 2.3789 91.9707 82.607
P/J m 80.9 2.3789 85.5818 76.2182
PL/J m 88.1 2.0602 92.1546 84.0454
RIIIS/J m 88.4444 2.3789 93.1263 83.7626
SJL/J m 87.03 2.2568 91.4716 82.5884
SM/J m 88.225 2.5232 93.1908 83.2592
SWR/J m 84.7833 2.0602 88.8379 80.7287




  GWAS USING LINEAR MIXED MODELS