Phenotype measure:   Mitchell1   activity_D2



  STRAIN COMPARISON PLOT
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Mitchell1 - distance traveled in 15 min, day2



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested15 strains
Mean of the strain means3162   cm
Median of the strain means3001   cm
SD of the strain means± 1439
Coefficient of variation (CV)0.455
Min–max range of strain means1310   –   7550   cm
Mean sample size per strain6.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 14 154466473.2655 11033319.519 15.3664 < 0.0001
Residuals 74 53133145.6333 718015.4815


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 1310.0 606.0   6 247.0 0.462 458.0, 1938.0 -1.29
A/HeJ m 1665.0 542.0   6 221.0 0.326 979.0, 2485.0 -1.04
AKR/J m 3278.0 1059.0   6 432.0 0.323 1612.0, 4820.0 0.08
BALB/cJ m 2818.0 871.0   6 356.0 0.309 1495.0, 3786.0 -0.24
C3H/HeJ m 3112.0 682.0   6 278.0 0.219 2059.0, 3930.0 -0.03
C57BL/6J m 3197.0 1193.0   6 487.0 0.373 1537.0, 4186.0 0.02
C57L/J m 3219.0 905.0   6 370.0 0.281 2266.0, 4424.0 0.04
C58/J m 7550.0 1121.0   5 501.0 0.148 6043.0, 9186.0 3.05
CBA/J m 2535.0 431.0   6 176.0 0.17 2084.0, 3122.0 -0.44
DBA/1J m 3585.0 538.0   6 220.0 0.15 2845.0, 4260.0 0.29
DBA/2J m 2075.0 1123.0   6 459.0 0.541 25.0, 3409.0 -0.76
NZB/BlNJ m 2802.0 1168.0   6 477.0 0.417 1435.0, 4362.0 -0.25
PL/J m 4525.0 929.0   6 379.0 0.205 3330.0, 5560.0 0.95
SJL/J m 3001.0 532.0   6 217.0 0.177 2201.0, 3535.0 -0.11
SWR/J m 2763.0 355.0   6 145.0 0.128 2298.0, 3305.0 -0.28


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 1310.3333 345.9324 1999.6187 621.0479
A/HeJ m 1664.6667 345.9324 2353.9521 975.3813
AKR/J m 3277.5 345.9324 3966.7854 2588.2146
BALB/cJ m 2818.3333 345.9324 3507.6187 2129.0479
C3H/HeJ m 3112.0 345.9324 3801.2854 2422.7146
C57BL/6J m 3197.3333 345.9324 3886.6187 2508.0479
C57L/J m 3219.1667 345.9324 3908.4521 2529.8813
C58/J m 7549.8 378.95 8304.8743 6794.7257
CBA/J m 2535.1667 345.9324 3224.4521 1845.8813
DBA/1J m 3585.3333 345.9324 4274.6187 2896.0479
DBA/2J m 2074.8333 345.9324 2764.1187 1385.5479
NZB/BlNJ m 2801.6667 345.9324 3490.9521 2112.3813
PL/J m 4525.0 345.9324 5214.2854 3835.7146
SJL/J m 3000.8333 345.9324 3690.1187 2311.5479
SWR/J m 2763.0 345.9324 3452.2854 2073.7146




  GENOME-WIDE ASSOCIATION (GWAS) STATIC PLOT
Plot generated with EMMA / pyLMM using 132K SNP array. Click on plot to view at larger size.