Phenotype measure:   Mitchell1   precue_rate

ID, description, units MPD:37603   precue_rate   number of responses made during pre-cue period   [n/s]
Data set, strains Mitchell1   inbred   15 strains     sex: m     age: 5-7wks
Procedure go/no-go task
Ontology mappings


  STRAIN COMPARISON PLOT
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Mitchell1 - number of responses made during pre-cue period



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested15 strains
Mean of the strain means0.0670   n/s
Median of the strain means0.0654   n/s
SD of the strain means± 0.0178
Coefficient of variation (CV)0.265
Min–max range of strain means0.0403   –   0.106   n/s
Mean sample size per strain8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 14 0.0375 0.0027 1.5154 0.1166
Residuals 113 0.1997 0.0018


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 0.0598 0.0234   8 0.00827 0.391 0.017, 0.086 -0.41
A/HeJ m 0.0477 0.0126   10 0.00399 0.265 0.03, 0.066 -1.09
AKR/J m 0.0489 0.0282   8 0.00998 0.578 0.014, 0.101 -1.02
BALB/cJ m 0.0458 0.0187   9 0.00624 0.409 0.024, 0.072 -1.19
C3H/HeJ m 0.106 0.0638   8 0.0226 0.601 0.025, 0.216 2.19
C57BL/6J m 0.0403 0.021   8 0.00744 0.523 0.01, 0.074 -1.5
C57L/J m 0.0571 0.0332   8 0.0117 0.581 0.032, 0.133 -0.56
C58/J m 0.0783 0.0322   8 0.0114 0.411 0.03, 0.129 0.64
CBA/J m 0.0803 0.0518   8 0.0183 0.646 0.037, 0.159 0.75
DBA/1J m 0.0654 0.0233   8 0.00824 0.356 0.028, 0.089 -0.09
DBA/2J m 0.07 0.0266   8 0.00942 0.381 0.034, 0.106 0.17
NZB/BlNJ m 0.077 0.0796   11 0.024 1.03 0.016, 0.303 0.56
PL/J m 0.0837 0.0563   10 0.0178 0.672 0.04, 0.225 0.94
SJL/J m 0.0644 0.0432   8 0.0153 0.671 0.028, 0.138 -0.15
SWR/J m 0.0805 0.0315   8 0.0111 0.391 0.054, 0.149 0.76


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 0.0598 0.0149 0.0892 0.0303
A/HeJ m 0.0477 0.0133 0.074 0.0214
AKR/J m 0.0489 0.0149 0.0783 0.0194
BALB/cJ m 0.0458 0.014 0.0735 0.018
C3H/HeJ m 0.1061 0.0149 0.1356 0.0767
C57BL/6J m 0.0402 0.0149 0.0697 0.0108
C57L/J m 0.0571 0.0149 0.0866 0.0277
C58/J m 0.0782 0.0149 0.1077 0.0488
CBA/J m 0.0802 0.0149 0.1097 0.0508
DBA/1J m 0.0654 0.0149 0.0948 0.0359
DBA/2J m 0.07 0.0149 0.0994 0.0406
NZB/BlNJ m 0.077 0.0127 0.1021 0.0519
PL/J m 0.0837 0.0133 0.11 0.0574
SJL/J m 0.0644 0.0149 0.0938 0.0349
SWR/J m 0.0805 0.0149 0.1099 0.0511




  GENOME-WIDE ASSOCIATION (GWAS) STATIC PLOT
Plot generated with EMMA / pyLMM using 132K SNP array. Click on plot to view at larger size.