Project measure / variable:   Xing2   gait_score_M06

ID, description, units MPD:36304   gait_score_M06   gait score (1-3)   [score]  at age 6mo  
Data set, strains Xing2   inbred   31 strains     sex: both     age: 26wks
Procedure gait analysis
Ontology mappings

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  STRAIN COMPARISON PLOT
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Xing2 - gait score (1-3) at age 6mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means2.85   score 2.83   score
Median of the strain means3.00   score 3.00   score
SD of the strain means± 0.278 ± 0.363
Coefficient of variation (CV)0.0975 0.128
Min–max range of strain means1.88   –   3.00   score 1.38   –   3.00   score
Mean sample size per strain7.7   mice 7.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0107 0.0107 0.0697 0.792
strain 27 39.6698 1.4693 9.5945 < 0.0001
sex:strain 27 5.8601 0.217 1.4173 0.0836
Residuals 383 58.6508 0.1531


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2.88 0.354   8 0.125 0.123 2.0, 3.0 0.1
129S1/SvImJ m 2.75 0.463   8 0.164 0.168 2.0, 3.0 -0.21
A/J f 2.25 0.707   8 0.25 0.314 1.0, 3.0 -2.17
A/J m 1.38 0.518   8 0.183 0.376 1.0, 2.0 -3.99
AKR/J f 2.25 0.886   8 0.313 0.394 1.0, 3.0 -2.17
AKR/J m 2.0 0.894   6 0.365 0.447 1.0, 3.0 -2.28
BALB/cByJ f 2.75 0.707   8 0.25 0.257 1.0, 3.0 -0.37
BALB/cByJ m 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.48
BTBR T+ Itpr3tf/J f 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.53
BTBR T+ Itpr3tf/J m 2.88 0.354   8 0.125 0.123 2.0, 3.0 0.15
BUB/BnJ f 1.88 0.991   8 0.35 0.529 1.0, 3.0 -3.5
BUB/BnJ m 2.17 0.983   6 0.401 0.454 1.0, 3.0 -1.81
C3H/HeJ f 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.53
C3H/HeJ m 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.48
C57BL/10J f 2.88 0.354   8 0.125 0.123 2.0, 3.0 0.1
C57BL/10J m 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.48
C57BL/6J f 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.53
C57BL/6J m 3.0 0.0   7 0.0 0.0 3.0, 3.0 0.48
C57BLKS/J f 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.53
C57BLKS/J m 2.88 0.354   8 0.125 0.123 2.0, 3.0 0.15
C57BR/cdJ f 2.62 0.744   8 0.263 0.283 1.0, 3.0 -0.84
C57BR/cdJ m 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.48
C57L/J f 2.88 0.354   8 0.125 0.123 2.0, 3.0 0.1
C57L/J m 3.0 0.0   10 0.0 0.0 3.0, 3.0 0.48
CAST/EiJ f 3.0 0.0   10 0.0 0.0 3.0, 3.0 0.53
CAST/EiJ m 3.0 0.0   3 0.0 0.0 3.0, 3.0 0.48
CBA/J f 3.0 0.0   7 0.0 0.0 3.0, 3.0 0.53
CBA/J m 2.57 0.787   7 0.297 0.306 1.0, 3.0 -0.71
DBA/2J f 3.0 0.0   7 0.0 0.0 3.0, 3.0 0.53
DBA/2J m 2.89 0.333   9 0.111 0.115 2.0, 3.0 0.18
FVB/NJ f 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.53
FVB/NJ m 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.48
KK/HlJ f 2.57 0.787   7 0.297 0.306 1.0, 3.0 -1.02
KK/HlJ m 2.88 0.354   8 0.125 0.123 2.0, 3.0 0.15
LP/J f 3.0 0.0   7 0.0 0.0 3.0, 3.0 0.53
LP/J m 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.48
MOLF/EiJ m 2.88 0.354   8 0.125 0.123 2.0, 3.0 0.15
MRL/MpJ f 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.53
MRL/MpJ m 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.48
NOD.B10Sn-H2b/J f 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.53
NOD.B10Sn-H2b/J m 3.0 0.0   16 0.0 0.0 3.0, 3.0 0.48
NZO/HlLtJ f 3.0 0.0   7 0.0 0.0 3.0, 3.0 0.53
NZO/HlLtJ m 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.48
NZW/LacJ f 2.88 0.354   8 0.125 0.123 2.0, 3.0 0.1
NZW/LacJ m 2.75 0.707   8 0.25 0.257 1.0, 3.0 -0.21
P/J f 3.0 0.0   1   0.0 0.0 3.0, 3.0 0.53
P/J m 3.0 0.0   5 0.0 0.0 3.0, 3.0 0.48
PL/J f 3.0 0.0   7 0.0 0.0 3.0, 3.0 0.53
PL/J m 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.48
PWD/PhJ f 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.53
PWD/PhJ m 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.48
RIIIS/J f 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.53
RIIIS/J m 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.48
SJL/J f 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.53
SJL/J m 3.0 0.0   3 0.0 0.0 3.0, 3.0 0.48
SM/J f 2.75 0.707   8 0.25 0.257 1.0, 3.0 -0.37
SM/J m 2.88 0.354   8 0.125 0.123 2.0, 3.0 0.15
SWR/J f 3.0 0.0   8 0.0 0.0 3.0, 3.0 0.53
SWR/J m 2.88 0.354   8 0.125 0.123 2.0, 3.0 0.15
WSB/EiJ f 3.0 0.0   6 0.0 0.0 3.0, 3.0 0.53


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2.875 0.1384 3.147 2.603
129S1/SvImJ m 2.75 0.1384 3.022 2.478
A/J f 2.25 0.1384 2.522 1.978
A/J m 1.375 0.1384 1.647 1.103
AKR/J f 2.25 0.1384 2.522 1.978
AKR/J m 2.0 0.1598 2.3141 1.6859
BALB/cByJ f 2.75 0.1384 3.022 2.478
BALB/cByJ m 3.0 0.1384 3.272 2.728
BTBR T+ Itpr3tf/J f 3.0 0.1384 3.272 2.728
BTBR T+ Itpr3tf/J m 2.875 0.1384 3.147 2.603
BUB/BnJ f 1.875 0.1384 2.147 1.603
BUB/BnJ m 2.1667 0.1598 2.4808 1.8526
C3H/HeJ f 3.0 0.1384 3.272 2.728
C3H/HeJ m 3.0 0.1384 3.272 2.728
C57BL/10J f 2.875 0.1384 3.147 2.603
C57BL/10J m 3.0 0.1384 3.272 2.728
C57BL/6J f 3.0 0.1384 3.272 2.728
C57BL/6J m 3.0 0.1479 3.2908 2.7092
C57BLKS/J f 3.0 0.1384 3.272 2.728
C57BLKS/J m 2.875 0.1384 3.147 2.603
C57BR/cdJ f 2.625 0.1384 2.897 2.353
C57BR/cdJ m 3.0 0.1384 3.272 2.728
C57L/J f 2.875 0.1384 3.147 2.603
C57L/J m 3.0 0.1237 3.2433 2.7567
CAST/EiJ f 3.0 0.1237 3.2433 2.7567
CAST/EiJ m 3.0 0.2259 3.4442 2.5558
CBA/J f 3.0 0.1479 3.2908 2.7092
CBA/J m 2.5714 0.1479 2.8622 2.2806
DBA/2J f 3.0 0.1479 3.2908 2.7092
DBA/2J m 2.8889 0.1304 3.1454 2.6324
FVB/NJ f 3.0 0.1384 3.272 2.728
FVB/NJ m 3.0 0.1384 3.272 2.728
KK/HlJ f 2.5714 0.1479 2.8622 2.2806
KK/HlJ m 2.875 0.1384 3.147 2.603
LP/J f 3.0 0.1479 3.2908 2.7092
LP/J m 3.0 0.1384 3.272 2.728
MRL/MpJ f 3.0 0.1384 3.272 2.728
MRL/MpJ m 3.0 0.1384 3.272 2.728
NOD.B10Sn-H2b/J f 3.0 0.1384 3.272 2.728
NOD.B10Sn-H2b/J m 3.0 0.0978 3.1924 2.8076
NZO/HlLtJ f 3.0 0.1479 3.2908 2.7092
NZO/HlLtJ m 3.0 0.1384 3.272 2.728
NZW/LacJ f 2.875 0.1384 3.147 2.603
NZW/LacJ m 2.75 0.1384 3.022 2.478
PL/J f 3.0 0.1479 3.2908 2.7092
PL/J m 3.0 0.1384 3.272 2.728
PWD/PhJ f 3.0 0.1384 3.272 2.728
PWD/PhJ m 3.0 0.1384 3.272 2.728
RIIIS/J f 3.0 0.1384 3.272 2.728
RIIIS/J m 3.0 0.1384 3.272 2.728
SJL/J f 3.0 0.1384 3.272 2.728
SJL/J m 3.0 0.2259 3.4442 2.5558
SM/J f 2.75 0.1384 3.022 2.478
SM/J m 2.875 0.1384 3.147 2.603
SWR/J f 3.0 0.1384 3.272 2.728
SWR/J m 2.875 0.1384 3.147 2.603


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 2.8125 0.0978 3.0049 2.6201
A/J both 1.8125 0.0978 2.0049 1.6201
AKR/J both 2.125 0.1057 2.3328 1.9172
BALB/cByJ both 2.875 0.0978 3.0674 2.6826
BTBR T+ Itpr3tf/J both 2.9375 0.0978 3.1299 2.7451
BUB/BnJ both 2.0208 0.1057 2.2286 1.8131
C3H/HeJ both 3.0 0.0978 3.1924 2.8076
C57BL/10J both 2.9375 0.0978 3.1299 2.7451
C57BL/6J both 3.0 0.1013 3.1991 2.8009
C57BLKS/J both 2.9375 0.0978 3.1299 2.7451
C57BR/cdJ both 2.8125 0.0978 3.0049 2.6201
C57L/J both 2.9375 0.0928 3.12 2.755
CAST/EiJ both 3.0 0.1288 3.2532 2.7468
CBA/J both 2.7857 0.1046 2.9913 2.5801
DBA/2J both 2.9444 0.0986 3.1383 2.7506
FVB/NJ both 3.0 0.0978 3.1924 2.8076
KK/HlJ both 2.7232 0.1013 2.9223 2.5241
LP/J both 3.0 0.1013 3.1991 2.8009
MRL/MpJ both 3.0 0.0978 3.1924 2.8076
NOD.B10Sn-H2b/J both 3.0 0.0847 3.1666 2.8334
NZO/HlLtJ both 3.0 0.1013 3.1991 2.8009
NZW/LacJ both 2.8125 0.0978 3.0049 2.6201
PL/J both 3.0 0.1013 3.1991 2.8009
PWD/PhJ both 3.0 0.0978 3.1924 2.8076
RIIIS/J both 3.0 0.0978 3.1924 2.8076
SJL/J both 3.0 0.1325 3.2604 2.7396
SM/J both 2.8125 0.0978 3.0049 2.6201
SWR/J both 2.9375 0.0978 3.1299 2.7451




  GWAS USING LINEAR MIXED MODELS