Project measure / variable:   Pletcher1   corticosterone

ID, description, units MPD:36020   corticosterone   serum corticosterone   [µg/dL]  
Data set, strains Pletcher1   inbred   29 strains     sex: m     age: 7-10wks*
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  STRAIN COMPARISON PLOT
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Pletcher1 - serum corticosterone



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested29 strains
Mean of the strain means2.50   µg/dL
Median of the strain means2.40   µg/dL
SD of the strain means± 1.76
Coefficient of variation (CV)0.702
Min–max range of strain means0.528   –   9.65   µg/dL
Mean sample size per strain5.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 182.7638 6.769 1.2982 0.1661
Residuals 143 745.6161 5.2141


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 3.19 3.76   5 1.68 1.18 0.5, 8.69 0.39
A/J m 2.89 3.33   4 1.67 1.15 0.5, 7.75 0.22
AKR/J m 3.31 3.04   8 1.08 0.92 0.5, 8.81 0.46
BALB/cJ m 1.79 1.51   14 0.402 0.841 0.52, 5.7 -0.41
BTBR T+ Itpr3tf/J m 3.83 2.75   5 1.23 0.717 0.5, 7.08 0.75
BUB/BnJ m 1.0 1.06   5 0.473 1.05 0.5, 2.89 -0.86
C3H/HeJ m 2.4 2.95   5 1.32 1.23 0.5, 7.23 -0.06
C57BL/6J m 2.75 2.02   9 0.673 0.733 0.54, 5.98 0.14
C57BLKS/J m 1.77 1.12   8 0.397 0.635 0.76, 3.55 -0.42
C58/J m 1.01 0.71   5 0.317 0.704 0.5, 2.1 -0.85
CBA/J m 2.09 1.89   9 0.63 0.902 0.5, 5.28 -0.24
CE/J m 2.76 3.67   6 1.5 1.33 0.52, 9.82 0.15
DBA/2J m 0.851 0.667   8 0.236 0.784 0.5, 2.46 -0.94
FVB/NJ m 4.15 3.31   6 1.35 0.799 0.55, 8.81 0.94
I/LnJ m 0.603 0.105   3 0.0606 0.174 0.5, 0.71 -1.08
LG/J m 1.22 0.611   6 0.25 0.5 0.6, 2.31 -0.73
LP/J m 4.08 2.51   6 1.02 0.615 1.03, 6.9 0.9
MA/MyJ m 2.5 2.65   4 1.33 1.06 0.5, 6.18 0.0
MRL/MpJ m 3.35 2.92   6 1.19 0.87 0.5, 8.44 0.48
NOD/ShiLtJ m 1.35 1.42   6 0.578 1.05 0.5, 4.05 -0.66
NOR/LtJ m 3.09 2.56   5 1.15 0.828 1.31, 7.57 0.33
NZB/BlNJ m 0.81 0.693   5 0.31 0.856 0.5, 2.05 -0.96
NZW/LacJ m 0.528 0.0486   4 0.0243 0.0921 0.5, 0.6 -1.12
PERA/EiJ m 9.65 0.0   1   0.0 0.0 9.65, 9.65 4.07
PL/J m 3.32 2.64   5 1.18 0.795 0.52, 6.35 0.46
RIIIS/J m 1.52 1.38   4 0.69 0.907 0.5, 3.55 -0.56
SJL/J m 1.34 1.0   6 0.41 0.747 0.5, 2.89 -0.66
SM/J m 3.46 3.84   5 1.72 1.11 0.5, 8.47 0.54
SWR/J m 2.0 2.78   9 0.928 1.39 0.5, 9.11 -0.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 3.194 1.0212 5.2126 1.1754
A/J m 2.89 1.1417 5.1468 0.6332
AKR/J m 3.3063 0.8073 4.9021 1.7104
BALB/cJ m 1.79 0.6103 2.9963 0.5837
BTBR T+ Itpr3tf/J m 3.834 1.0212 5.8526 1.8154
BUB/BnJ m 1.002 1.0212 3.0206 0.0
C3H/HeJ m 2.4 1.0212 4.4186 0.3814
C57BL/6J m 2.7533 0.7611 4.2579 1.2488
C57BLKS/J m 1.7687 0.8073 3.3646 0.1729
C58/J m 1.008 1.0212 3.0266 0.0
CBA/J m 2.0944 0.7611 3.599 0.5899
CE/J m 2.755 0.9322 4.5977 0.9123
DBA/2J m 0.8512 0.8073 2.4471 0.0
FVB/NJ m 4.1483 0.9322 5.991 2.3056
I/LnJ m 0.6033 1.3183 3.2093 0.0
LG/J m 1.2233 0.9322 3.066 0.0
LP/J m 4.0833 0.9322 5.926 2.2406
MA/MyJ m 2.4975 1.1417 4.7543 0.2407
MRL/MpJ m 3.3517 0.9322 5.1944 1.509
NOD/ShiLtJ m 1.3533 0.9322 3.196 0.0
NOR/LtJ m 3.094 1.0212 5.1126 1.0754
NZB/BlNJ m 0.81 1.0212 2.8286 0.0
NZW/LacJ m 0.5275 1.1417 2.7843 0.0
PL/J m 3.32 1.0212 5.3386 1.3014
RIIIS/J m 1.52 1.1417 3.7768 0.0
SJL/J m 1.345 0.9322 3.1877 0.0
SM/J m 3.464 1.0212 5.4826 1.4454
SWR/J m 2.0 0.7611 3.5046 0.4954




  GWAS USING LINEAR MIXED MODELS