Project measure / variable:   Koide3   stretch_attend

ID, description, units MPD:35914   stretch_attend   stretching body forward with stationery hindlimbs, presence or absence of activity in 5s intervals over 10 min test   [n]  
Data set, strains Koide3   wild-derived Mishima   12 strains     sex: both     age: 10wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Koide3 - stretching body forward with stationery hindlimbs, presence or absence of activity in 5s intervals over 10 min test

NJL/MsCAST/EiJJF1/MsJCHD/MsC57BL/6JMSM/MsJHMI/MsBFM/2MsSWN/MsPGN2/MsBLG2/MsKJR/Ms n 051015202530femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested12 strains12 strains
Mean of the strain means3.59   n 4.28   n
Median of the strain means3.10   n 4.40   n
SD of the strain means± 2.85 ± 3.27
Coefficient of variation (CV)0.793 0.763
Min–max range of strain means0.400   –   8.10   n 0.500   –   10.3   n
Mean sample size per strain10.0   mice 10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 28.7042 28.7042 1.509 0.2206
strain 11 1894.4125 172.2193 9.0538 < 0.0001
sex:strain 11 174.2458 15.8405 0.8328 0.6074
Residuals 216 4108.7 19.0218


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 24 (24)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
BFM/2Ms f 0.9 1.85   10 0.586 2.06 -0.94
BFM/2Ms m 2.5 2.17   10 0.687 0.869 -0.55
BLG2/Ms f 1.1 1.45   10 0.458 1.32 -0.87
BLG2/Ms m 0.5 0.85   10 0.269 1.7 -1.16
C57BL/6J f 5.2 2.39   10 0.757 0.46 1.0, 8.0 0.56
C57BL/6J m 4.7 3.02   10 0.955 0.643 2.0, 10.0 0.13
CAST/EiJ f 7.4 11.1   10 3.5 1.5 1.34
CAST/EiJ m 8.2 10.8   10 3.42 1.32 1.2
CHD/Ms f 6.4 6.59   10 2.08 1.03 1.0, 23.0 0.99
CHD/Ms m 5.4 3.2   10 1.01 0.593 1.0, 12.0 0.34
HMI/Ms f 1.3 1.25   10 0.396 0.963 -0.8
HMI/Ms m 4.1 3.03   10 0.96 0.74 -0.06
JF1/MsJ f 5.3 5.03   10 1.59 0.95 0.6
JF1/MsJ m 10.3 4.69   10 1.48 0.455 4.0, 17.0 1.84
KJR/Ms f 0.4 0.699   10 0.221 1.75 -1.12
KJR/Ms m 0.6 0.843   10 0.267 1.41 -1.13
MSM/MsJ f 4.5 2.88   10 0.91 0.639 0.32
MSM/MsJ m 5.2 3.82   10 1.21 0.735 0.28
NJL/Ms f 8.1 5.28   10 1.67 0.652 1.0, 20.0 1.58
NJL/Ms m 7.7 4.42   10 1.4 0.574 1.0, 14.0 1.05
PGN2/Ms f 1.7 1.57   10 0.496 0.922 -0.66
PGN2/Ms m 0.5 0.85   10 0.269 1.7 -1.16
SWN/Ms f 0.8 1.03   10 0.327 1.29 -0.98
SWN/Ms m 1.7 1.83   10 0.578 1.08 -0.79


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BFM/2Ms f 0.9 1.3792 3.6184 0.0
BFM/2Ms m 2.5 1.3792 5.2184 0.0
BLG2/Ms f 1.1 1.3792 3.8184 0.0
BLG2/Ms m 0.5 1.3792 3.2184 0.0
C57BL/6J f 5.2 1.3792 7.9184 2.4816
C57BL/6J m 4.7 1.3792 7.4184 1.9816
CAST/EiJ f 7.4 1.3792 10.1184 4.6816
CAST/EiJ m 8.2 1.3792 10.9184 5.4816
CHD/Ms f 6.4 1.3792 9.1184 3.6816
CHD/Ms m 5.4 1.3792 8.1184 2.6816
HMI/Ms f 1.3 1.3792 4.0184 0.0
HMI/Ms m 4.1 1.3792 6.8184 1.3816
JF1/MsJ f 5.3 1.3792 8.0184 2.5816
JF1/MsJ m 10.3 1.3792 13.0184 7.5816
KJR/Ms f 0.4 1.3792 3.1184 0.0
KJR/Ms m 0.6 1.3792 3.3184 0.0
MSM/MsJ f 4.5 1.3792 7.2184 1.7816
MSM/MsJ m 5.2 1.3792 7.9184 2.4816
NJL/Ms f 8.1 1.3792 10.8184 5.3816
NJL/Ms m 7.7 1.3792 10.4184 4.9816
PGN2/Ms f 1.7 1.3792 4.4184 0.0
PGN2/Ms m 0.5 1.3792 3.2184 0.0
SWN/Ms f 0.8 1.3792 3.5184 0.0
SWN/Ms m 1.7 1.3792 4.4184 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BFM/2Ms both 1.7 0.9752 3.6222 0.0
BLG2/Ms both 0.8 0.9752 2.7222 0.0
C57BL/6J both 4.95 0.9752 6.8722 3.0278
CAST/EiJ both 7.8 0.9752 9.7222 5.8778
CHD/Ms both 5.9 0.9752 7.8222 3.9778
HMI/Ms both 2.7 0.9752 4.6222 0.7778
JF1/MsJ both 7.8 0.9752 9.7222 5.8778
KJR/Ms both 0.5 0.9752 2.4222 0.0
MSM/MsJ both 4.85 0.9752 6.7722 2.9278
NJL/Ms both 7.9 0.9752 9.8222 5.9778
PGN2/Ms both 1.1 0.9752 3.0222 0.0
SWN/Ms both 1.25 0.9752 3.1722 0.0




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA