Project measure / variable:   Koide3   leaning

ID, description, units MPD:35904   leaning   leaning activity while rearing, presence or absence of activity in 5s intervals over 10 min test   [n]  
Data set, strains Koide3   wild-derived Mishima   12 strains     sex: both     age: 10wks
Procedure open field test
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  STRAIN COMPARISON PLOT


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested12 strains12 strains
Mean of the strain means59.8   n 57.3   n
Median of the strain means64.0   n 61.4   n
SD of the strain means± 19.5 ± 19.7
Coefficient of variation (CV)0.326 0.344
Min–max range of strain means21.7   –   87.4   n 20.2   –   92.5   n
Mean sample size per strain10.0   mice 10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 370.0167 370.0167 1.6256 0.2037
strain 11 80802.1333 7345.6485 32.2721 < 0.0001
sex:strain 11 3721.7833 338.3439 1.4865 0.1379
Residuals 216 49165.0 227.6157


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 24 (24)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
BFM/2Ms f 79.7 15.6   10 4.94 0.196 55.0, 105.0 1.02
BFM/2Ms m 65.7 15.3   10 4.83 0.232 41.0, 85.0 0.42
BLG2/Ms f 65.4 9.99   10 3.16 0.153 53.0, 82.0 0.29
BLG2/Ms m 70.6 12.8   10 4.04 0.181 52.0, 86.0 0.67
C57BL/6J f 45.4 13.8   10 4.38 0.305 29.0, 68.0 -0.74
C57BL/6J m 43.7 5.76   10 1.82 0.132 36.0, 55.0 -0.69
CAST/EiJ f 70.3 24.4   10 7.71 0.347 19.0, 92.0 0.54
CAST/EiJ m 57.3 21.6   10 6.84 0.377 22.0, 98.0 0.0
CHD/Ms f 21.7 9.57   10 3.03 0.441 7.0, 38.0 -1.96
CHD/Ms m 29.3 14.4   10 4.56 0.492 8.0, 58.0 -1.42
HMI/Ms f 73.0 20.0   10 6.33 0.274 34.0, 90.0 0.68
HMI/Ms m 66.1 14.1   10 4.46 0.213 42.0, 85.0 0.45
JF1/MsJ f 33.9 21.1   10 6.68 0.624 7.0, 75.0 -1.33
JF1/MsJ m 20.2 11.3   10 3.56 0.558 4.0, 35.0 -1.88
KJR/Ms f 87.4 6.83   10 2.16 0.0782 78.0, 99.0 1.42
KJR/Ms m 92.5 11.5   10 3.64 0.124 73.0, 111.0 1.78
MSM/MsJ f 46.1 12.4   10 3.91 0.268 28.0, 67.0 -0.7
MSM/MsJ m 52.4 14.4   10 4.55 0.275 23.0, 75.0 -0.25
NJL/Ms f 62.5 15.4   10 4.87 0.247 44.0, 93.0 0.14
NJL/Ms m 65.4 15.5   10 4.91 0.237 42.0, 91.0 0.41
PGN2/Ms f 59.2 15.4   10 4.86 0.26 40.0, 87.0 -0.03
PGN2/Ms m 51.7 15.7   10 4.97 0.304 30.0, 78.0 -0.29
SWN/Ms f 73.1 11.6   10 3.66 0.158 54.0, 91.0 0.68
SWN/Ms m 73.0 18.1   10 5.72 0.248 50.0, 97.0 0.79


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BFM/2Ms f 79.7 4.7709 89.1035 70.2965
BFM/2Ms m 65.7 4.7709 75.1035 56.2965
BLG2/Ms f 65.4 4.7709 74.8035 55.9965
BLG2/Ms m 70.6 4.7709 80.0035 61.1965
C57BL/6J f 45.4 4.7709 54.8035 35.9965
C57BL/6J m 43.7 4.7709 53.1035 34.2965
CAST/EiJ f 70.3 4.7709 79.7035 60.8965
CAST/EiJ m 57.3 4.7709 66.7035 47.8965
CHD/Ms f 21.7 4.7709 31.1035 12.2965
CHD/Ms m 29.3 4.7709 38.7035 19.8965
HMI/Ms f 73.0 4.7709 82.4035 63.5965
HMI/Ms m 66.1 4.7709 75.5035 56.6965
JF1/MsJ f 33.9 4.7709 43.3035 24.4965
JF1/MsJ m 20.2 4.7709 29.6035 10.7965
KJR/Ms f 87.4 4.7709 96.8035 77.9965
KJR/Ms m 92.5 4.7709 101.9035 83.0965
MSM/MsJ f 46.1 4.7709 55.5035 36.6965
MSM/MsJ m 52.4 4.7709 61.8035 42.9965
NJL/Ms f 62.5 4.7709 71.9035 53.0965
NJL/Ms m 65.4 4.7709 74.8035 55.9965
PGN2/Ms f 59.2 4.7709 68.6035 49.7965
PGN2/Ms m 51.7 4.7709 61.1035 42.2965
SWN/Ms f 73.1 4.7709 82.5035 63.6965
SWN/Ms m 73.0 4.7709 82.4035 63.5965


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BFM/2Ms both 72.7 3.3735 79.3493 66.0507
BLG2/Ms both 68.0 3.3735 74.6493 61.3507
C57BL/6J both 44.55 3.3735 51.1993 37.9007
CAST/EiJ both 63.8 3.3735 70.4493 57.1507
CHD/Ms both 25.5 3.3735 32.1493 18.8507
HMI/Ms both 69.55 3.3735 76.1993 62.9007
JF1/MsJ both 27.05 3.3735 33.6993 20.4007
KJR/Ms both 89.95 3.3735 96.5993 83.3007
MSM/MsJ both 49.25 3.3735 55.8993 42.6007
NJL/Ms both 63.95 3.3735 70.5993 57.3007
PGN2/Ms both 55.45 3.3735 62.0993 48.8007
SWN/Ms both 73.05 3.3735 79.6993 66.4007




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA