Project measure / variable:   Koide3   ambulation

ID, description, units MPD:35902   ambulation   ambulatory activity, horizontal, presence or absence of activity in 5s intervals over 10 min test   [n]  
Data set, strains Koide3   wild-derived Mishima   12 strains     sex: both     age: 10wks
Procedure open field test
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Koide3 - ambulatory activity, horizontal, presence or absence of activity in 5s intervals over 10 min test

C57BL/6JBLG2/MsKJR/MsCAST/EiJSWN/MsBFM/2MsHMI/MsNJL/MsPGN2/MsCHD/MsMSM/MsJJF1/MsJ n 0102030405060708090100110120femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested12 strains12 strains
Mean of the strain means84.8   n 80.9   n
Median of the strain means88.8   n 85.6   n
SD of the strain means± 14.6 ± 21.0
Coefficient of variation (CV)0.172 0.259
Min–max range of strain means50.2   –   107   n 24.5   –   104   n
Mean sample size per strain10.0   mice 10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 904.8167 904.8167 3.2593 0.0724
strain 11 67035.5333 6094.1394 21.9522 < 0.0001
sex:strain 11 4849.3833 440.853 1.588 0.1037
Residuals 216 59963.6 277.6093


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 24 (24)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
BFM/2Ms f 90.9 15.1   10 4.78 0.166 55.0, 107.0 0.42
BFM/2Ms m 92.2 10.9   10 3.44 0.118 78.0, 114.0 0.54
BLG2/Ms f 93.7 10.9   10 3.46 0.117 78.0, 109.0 0.61
BLG2/Ms m 94.0 11.1   10 3.5 0.118 82.0, 111.0 0.63
C57BL/6J f 107.0 10.0   10 3.16 0.0938 81.0, 117.0 1.52
C57BL/6J m 104.0 6.91   10 2.19 0.0663 92.0, 114.0 1.1
CAST/EiJ f 90.4 24.8   10 7.83 0.274 32.0, 112.0 0.38
CAST/EiJ m 93.7 18.9   10 5.99 0.202 59.0, 116.0 0.61
CHD/Ms f 75.0 22.3   10 7.04 0.297 41.0, 103.0 -0.67
CHD/Ms m 74.0 25.5   10 8.08 0.345 37.0, 108.0 -0.33
HMI/Ms f 94.1 17.7   10 5.58 0.188 56.0, 114.0 0.64
HMI/Ms m 80.5 12.6   10 3.98 0.156 63.0, 105.0 -0.02
JF1/MsJ f 50.2 27.7   10 8.77 0.553 15.0, 114.0 -2.37
JF1/MsJ m 24.5 23.1   10 7.31 0.944 1.0, 65.0 -2.69
KJR/Ms f 87.2 9.26   10 2.93 0.106 72.0, 101.0 0.16
KJR/Ms m 97.6 8.22   10 2.6 0.0842 81.0, 109.0 0.8
MSM/MsJ f 70.3 18.1   10 5.71 0.257 40.0, 100.0 -0.99
MSM/MsJ m 70.0 12.6   10 3.99 0.18 48.0, 91.0 -0.52
NJL/Ms f 83.5 13.5   10 4.27 0.162 70.0, 114.0 -0.09
NJL/Ms m 82.2 21.8   10 6.88 0.265 40.0, 107.0 0.06
PGN2/Ms f 80.7 12.4   10 3.92 0.154 57.0, 102.0 -0.28
PGN2/Ms m 68.7 8.53   10 2.7 0.124 57.0, 86.0 -0.58
SWN/Ms f 94.7 13.4   10 4.23 0.141 73.0, 109.0 0.68
SWN/Ms m 89.0 18.2   10 5.75 0.204 55.0, 111.0 0.39


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BFM/2Ms f 90.9 5.2689 101.285 80.515
BFM/2Ms m 92.2 5.2689 102.585 81.815
BLG2/Ms f 93.7 5.2689 104.085 83.315
BLG2/Ms m 94.0 5.2689 104.385 83.615
C57BL/6J f 106.6 5.2689 116.985 96.215
C57BL/6J m 104.3 5.2689 114.685 93.915
CAST/EiJ f 90.4 5.2689 100.785 80.015
CAST/EiJ m 93.7 5.2689 104.085 83.315
CHD/Ms f 75.0 5.2689 85.385 64.615
CHD/Ms m 74.0 5.2689 84.385 63.615
HMI/Ms f 94.1 5.2689 104.485 83.715
HMI/Ms m 80.5 5.2689 90.885 70.115
JF1/MsJ f 50.2 5.2689 60.585 39.815
JF1/MsJ m 24.5 5.2689 34.885 14.115
KJR/Ms f 87.2 5.2689 97.585 76.815
KJR/Ms m 97.6 5.2689 107.985 87.215
MSM/MsJ f 70.3 5.2689 80.685 59.915
MSM/MsJ m 70.0 5.2689 80.385 59.615
NJL/Ms f 83.5 5.2689 93.885 73.115
NJL/Ms m 82.2 5.2689 92.585 71.815
PGN2/Ms f 80.7 5.2689 91.085 70.315
PGN2/Ms m 68.7 5.2689 79.085 58.315
SWN/Ms f 94.7 5.2689 105.085 84.315
SWN/Ms m 89.0 5.2689 99.385 78.615


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BFM/2Ms both 91.55 3.7256 98.8933 84.2067
BLG2/Ms both 93.85 3.7256 101.1933 86.5067
C57BL/6J both 105.45 3.7256 112.7933 98.1067
CAST/EiJ both 92.05 3.7256 99.3933 84.7067
CHD/Ms both 74.5 3.7256 81.8433 67.1567
HMI/Ms both 87.3 3.7256 94.6433 79.9567
JF1/MsJ both 37.35 3.7256 44.6933 30.0067
KJR/Ms both 92.4 3.7256 99.7433 85.0567
MSM/MsJ both 70.15 3.7256 77.4933 62.8067
NJL/Ms both 82.85 3.7256 90.1933 75.5067
PGN2/Ms both 74.7 3.7256 82.0433 67.3567
SWN/Ms both 91.85 3.7256 99.1933 84.5067




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA