Project measure / variable:   Jaxpheno7   latency_accel2

ID, description, units MPD:34952   latency_accel2   latency to fall from accelerating rotarod, 6 rpm/min   [s]  trial2  
Data set, strains Jaxpheno7   inbred   6 strains     sex: m     age: 10wks
Procedure rotarod
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  STRAIN COMPARISON PLOT
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Jaxpheno7 - latency to fall from accelerating rotarod, 6 rpm/min trial2

AKR/JDBA/2JC57BL/6JBALB/cJC3H/HeJA/J s 020406080100120140160180femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested6 strains
Mean of the strain means40.4   s
Median of the strain means34.1   s
SD of the strain means± 39.0
Coefficient of variation (CV)0.966
Min–max range of strain means6.17   –   115   s
Mean sample size per strain8.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 5 72223.7986 14444.7597 15.2617 < 0.0001
Residuals 45 42591.1818 946.4707


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
A/J m 6.17 7.05   6 2.88 1.14 -0.88
AKR/J m 115.0 46.0   11 13.9 0.398 16.0, 173.0 1.91
BALB/cJ m 32.0 27.3   11 8.24 0.854 9.0, 90.0 -0.22
C3H/HeJ m 12.3 6.44   6 2.63 0.522 1.0, 20.0 -0.72
C57BL/6J m 36.2 30.4   6 12.4 0.839 18.0, 97.0 -0.11
DBA/2J m 40.8 29.9   11 9.01 0.732 2.0, 90.0 0.01


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 6.1667 12.5597 31.4631 0.0
AKR/J m 115.3636 9.2759 134.0463 96.681
BALB/cJ m 32.0 9.2759 50.6827 13.3173
C3H/HeJ m 12.3333 12.5597 37.6298 0.0
C57BL/6J m 36.1667 12.5597 61.4631 10.8702
DBA/2J m 40.8182 9.2759 59.5009 22.1355




  GWAS USING LINEAR MIXED MODELS

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