Project measure / variable:   Rhodes1   BW_chg_wheel

ID, description, units MPD:34612   BW_chg_wheel   change in body weight   [ratio]  with running wheel  
exercise study
Data set, strains Rhodes1   inbred   12 strains     sex: both     age: 15wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Rhodes1 - change in body weight with running wheel



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested12 strains12 strains
Mean of the strain means1.11   ratio 1.11   ratio
Median of the strain means1.11   ratio 1.10   ratio
SD of the strain means± 0.0492 ± 0.0581
Coefficient of variation (CV)0.0442 0.0524
Min–max range of strain means1.01   –   1.19   ratio 1.05   –   1.22   ratio
Mean sample size per strain3.8   mice 3.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0016 0.0016 0.3123 0.5782
strain 11 0.1023 0.0093 1.8148 0.0693
sex:strain 11 0.115 0.0105 2.0405 0.0382
Residuals 65 0.3329 0.0051


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1.11 0.0173   3 0.01 0.0156 1.1, 1.13 -0.07
129S1/SvImJ m 1.22 0.101   3 0.0586 0.0832 1.13, 1.33 1.91
AKR/J f 1.06 0.0191   4 0.00957 0.018 1.05, 1.09 -1.08
AKR/J m 1.12 0.025   4 0.0125 0.0223 1.09, 1.15 0.19
B6129SF1/J f 1.08 0.00577   4 0.00289 0.00532 1.08, 1.09 -0.68
B6129SF1/J m 1.1 0.0519   4 0.0259 0.0473 1.06, 1.17 -0.16
B6D2F1/J f 1.19 0.0427   4 0.0214 0.036 1.16, 1.25 1.56
B6D2F1/J m 1.06 0.0359   4 0.018 0.034 1.03, 1.11 -0.85
BALB/cByJ f 1.15 0.0252   4 0.0126 0.0218 1.13, 1.19 0.74
BALB/cByJ m 1.08 0.12   4 0.0599 0.111 0.91, 1.19 -0.5
BTBR T+ Itpr3tf/J f 1.11 0.0265   3 0.0153 0.0238 1.08, 1.13 -0.07
BTBR T+ Itpr3tf/J m 1.06 0.231   3 0.133 0.218 0.8, 1.24 -0.85
C57BL/10J f 1.16 0.0755   4 0.0377 0.0648 1.06, 1.24 0.95
C57BL/10J m 1.11 0.0265   3 0.0153 0.0238 1.09, 1.14 0.01
C57BL/6J f 1.11 0.0337   4 0.0168 0.0303 1.09, 1.16 -0.07
C57BL/6J m 1.09 0.0275   4 0.0138 0.0252 1.06, 1.12 -0.33
CAST/EiJ f 1.01 0.0569   3 0.0328 0.0561 0.95, 1.06 -2.1
CAST/EiJ m 1.05 0.11   3 0.0636 0.105 0.98, 1.18 -1.02
DBA/2J f 1.15 0.0387   4 0.0194 0.0338 1.1, 1.19 0.74
DBA/2J m 1.19 0.033   4 0.0165 0.0278 1.15, 1.22 1.39
NOD/ShiLtJ f 1.14 0.066   4 0.033 0.058 1.05, 1.21 0.54
NOD/ShiLtJ m 1.05 0.0574   4 0.0287 0.0548 0.97, 1.1 -1.02
SM/J f 1.09 0.11   4 0.0548 0.1 0.93, 1.17 -0.47
SM/J m 1.18 0.0751   4 0.0375 0.0639 1.11, 1.27 1.22


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1.11 0.0413 1.1925 1.0275
129S1/SvImJ m 1.22 0.0413 1.3025 1.1375
AKR/J f 1.065 0.0358 1.1365 0.9935
AKR/J m 1.1225 0.0358 1.194 1.051
B6129SF1/J f 1.085 0.0358 1.1565 1.0135
B6129SF1/J m 1.0975 0.0358 1.169 1.026
B6D2F1/J f 1.1875 0.0358 1.259 1.116
B6D2F1/J m 1.0575 0.0358 1.129 0.986
BALB/cByJ f 1.155 0.0358 1.2265 1.0835
BALB/cByJ m 1.08 0.0358 1.1515 1.0085
BTBR T+ Itpr3tf/J f 1.11 0.0413 1.1925 1.0275
BTBR T+ Itpr3tf/J m 1.06 0.0413 1.1425 0.9775
C57BL/10J f 1.165 0.0358 1.2365 1.0935
C57BL/10J m 1.11 0.0413 1.1925 1.0275
C57BL/6J f 1.11 0.0358 1.1815 1.0385
C57BL/6J m 1.0925 0.0358 1.164 1.021
CAST/EiJ f 1.0133 0.0413 1.0959 0.9308
CAST/EiJ m 1.0533 0.0413 1.1359 0.9708
DBA/2J f 1.145 0.0358 1.2165 1.0735
DBA/2J m 1.1875 0.0358 1.259 1.116
NOD/ShiLtJ f 1.1375 0.0358 1.209 1.066
NOD/ShiLtJ m 1.0475 0.0358 1.119 0.976
SM/J f 1.09 0.0358 1.1615 1.0185
SM/J m 1.175 0.0358 1.2465 1.1035


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.165 0.0292 1.2234 1.1066
AKR/J both 1.0938 0.0253 1.1443 1.0432
B6129SF1/J both 1.0913 0.0253 1.1418 1.0407
B6D2F1/J both 1.1225 0.0253 1.173 1.072
BALB/cByJ both 1.1175 0.0253 1.168 1.067
BTBR T+ Itpr3tf/J both 1.085 0.0292 1.1434 1.0266
C57BL/10J both 1.1375 0.0273 1.1921 1.0829
C57BL/6J both 1.1013 0.0253 1.1518 1.0507
CAST/EiJ both 1.0333 0.0292 1.0917 0.975
DBA/2J both 1.1662 0.0253 1.2168 1.1157
NOD/ShiLtJ both 1.0925 0.0253 1.143 1.042
SM/J both 1.1325 0.0253 1.183 1.082




  GWAS USING LINEAR MIXED MODELS