Project measure / variable:   Nelson1   fat_AL

ID, description, units MPD:34105   fat_AL   fat tissue mass, head included (NMR)   [g]  control  
restricted diet study
Data set, strains Nelson1   ILSXISS   44 strains     sex: both     age: 65-74wks
Procedure NMR
Ontology mappings

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  STRAIN COMPARISON PLOT
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Nelson1 - fat tissue mass, head included (NMR) control



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested39 strains41 strains
Mean of the strain means5.38   g 6.45   g
Median of the strain means4.80   g 5.89   g
SD of the strain means± 1.95 ± 2.36
Coefficient of variation (CV)0.361 0.365
Min–max range of strain means3.18   –   12.5   g 2.81   –   13.3   g
Mean sample size per strain4.6   mice 4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 58.6995 58.6995 16.6302 0.0001
strain 34 955.1271 28.092 7.9587 < 0.0001
sex:strain 34 374.4576 11.0135 3.1202 < 0.0001
Residuals 272 960.0787 3.5297


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
ILSXISS100/TejJ f 4.8 1.32   5 0.59 0.275 3.83, 7.07 -0.3
ILSXISS100/TejJ m 4.24 1.47   5 0.657 0.346 1.9, 5.7 -0.94
ILSXISS103/TejJ f 4.85 0.937   5 0.419 0.193 3.93, 6.42 -0.27
ILSXISS103/TejJ m 5.94 1.53   5 0.684 0.257 4.04, 8.01 -0.22
ILSXISS107/TejJ f 3.36 0.666   4 0.333 0.198 2.74, 4.23 -1.04
ILSXISS107/TejJ m 5.01 1.05   5 0.469 0.209 3.42, 6.24 -0.61
ILSXISS110/TejJ f 7.06 1.53   5 0.683 0.217 5.18, 9.0 0.86
ILSXISS110/TejJ m 3.31 0.916   3 0.529 0.277 2.25, 3.87 -1.33
ILSXISS112/TejJ f 3.32 0.875   4 0.437 0.263 2.47, 4.37 -1.06
ILSXISS112/TejJ m 9.74 5.16   4 2.58 0.529 4.15, 15.7 1.4
ILSXISS114/TejJ f 4.57 1.58   4 0.792 0.347 3.42, 6.91 -0.42
ILSXISS114/TejJ m 4.83 0.465   3 0.269 0.0963 4.54, 5.37 -0.69
ILSXISS115/TejJ f 3.49 0.381   5 0.171 0.109 3.03, 3.86 -0.97
ILSXISS115/TejJ m 8.04 2.21   5 0.988 0.275 6.6, 11.9 0.68
ILSXISS117 f 6.0 1.38   4 0.692 0.231 4.49, 7.72 0.32
ILSXISS117 m 4.38 1.1   5 0.492 0.251 3.15, 5.81 -0.88
ILSXISS122/TejJ f 5.09 0.968   4 0.484 0.19 4.4, 6.52 -0.15
ILSXISS122/TejJ m 2.81 0.261   5 0.117 0.0932 2.6, 3.21 -1.54
ILSXISS123/TejJ f 4.4 1.52   5 0.682 0.346 2.54, 6.73 -0.51
ILSXISS123/TejJ m 5.62 1.0   4 0.5 0.178 4.34, 6.78 -0.35
ILSXISS13/TejJ f 4.11 0.512   5 0.229 0.125 3.53, 4.86 -0.66
ILSXISS13/TejJ m 4.77 0.954   5 0.427 0.2 3.65, 6.29 -0.71
ILSXISS14/TejJ m 8.87 1.51   5 0.674 0.17 6.99, 11.1 1.03
ILSXISS16/TejJ f 4.64 0.93   3 0.537 0.2 3.6, 5.39 -0.38
ILSXISS16/TejJ m 5.57 2.25   5 1.01 0.405 2.08, 8.11 -0.37
ILSXISS19/TejJ f 4.12 0.68   5 0.304 0.165 3.31, 5.2 -0.65
ILSXISS19/TejJ m 5.89 1.0   5 0.448 0.17 4.42, 6.62 -0.24
ILSXISS22/TejJ m 6.51 1.31   5 0.588 0.202 4.54, 8.01 0.03
ILSXISS23/TejJ f 6.28 1.52   15 0.393 0.242 3.76, 9.47 0.46
ILSXISS23/TejJ m 6.79 2.23   9 0.743 0.328 4.38, 11.5 0.14
ILSXISS24/TejJ f 12.5 2.77   5 1.24 0.221 9.56, 16.3 3.66
ILSXISS24/TejJ m 8.91 4.62   5 2.07 0.519 2.4, 14.2 1.04
ILSXISS25/TejJ f 8.11 1.28   5 0.573 0.158 6.64, 10.0 1.4
ILSXISS25/TejJ m 7.1 0.697   5 0.312 0.0982 6.22, 8.13 0.28
ILSXISS26/TejJ f 5.87 1.21   5 0.539 0.206 4.1, 7.3 0.25
ILSXISS26/TejJ m 10.6 2.07   5 0.924 0.194 8.82, 13.9 1.76
ILSXISS28/TejJ f 3.5 0.557   5 0.249 0.159 2.7, 4.14 -0.97
ILSXISS3/TejJ f 5.29 0.424   5 0.189 0.08 4.74, 5.73 -0.05
ILSXISS3/TejJ m 5.92 1.21   3 0.7 0.205 4.76, 7.18 -0.22
ILSXISS41/TejJ f 6.45 1.87   5 0.835 0.29 3.34, 8.4 0.55
ILSXISS41/TejJ m 5.75 0.894   5 0.4 0.155 4.34, 6.59 -0.3
ILSXISS46/TejJ f 6.81 1.99   5 0.89 0.293 3.92, 9.1 0.73
ILSXISS48/TejJ f 4.76 0.772   5 0.345 0.162 3.56, 5.5 -0.32
ILSXISS48/TejJ m 6.23 1.86   5 0.832 0.298 3.17, 8.17 -0.09
ILSXISS49/TejJ f 4.2 1.15   5 0.516 0.275 2.71, 5.55 -0.61
ILSXISS49/TejJ m 5.87 2.27   4 1.14 0.387 2.96, 7.82 -0.25
ILSXISS50/TejJ f 3.26 0.0   1   0.0 0.0 3.26, 3.26 -1.09
ILSXISS50/TejJ m 3.65 0.0849   2   0.06 0.0232 3.59, 3.71 -1.19
ILSXISS51/TejJ f 6.57 1.32   5 0.588 0.2 5.77, 8.88 0.61
ILSXISS51/TejJ m 8.86 2.28   5 1.02 0.257 6.3, 11.4 1.02
ILSXISS52/TejJ m 4.87 1.44   4 0.718 0.295 3.25, 6.68 -0.67
ILSXISS56/TejJ f 7.27 3.4   5 1.52 0.467 2.39, 10.4 0.97
ILSXISS56/TejJ m 11.6 4.79   5 2.14 0.414 3.29, 15.0 2.19
ILSXISS60/TejJ f 3.18 0.0   1   0.0 0.0 3.18, 3.18 -1.13
ILSXISS62/TejJ m 13.3 1.68   5 0.751 0.126 11.4, 15.6 2.91
ILSXISS66/TejJ f 3.53 0.77   4 0.385 0.218 2.55, 4.38 -0.95
ILSXISS66/TejJ m 4.52 0.0794   4 0.0397 0.0176 4.4, 4.58 -0.82
ILSXISS79 m 3.47 1.27   4 0.634 0.366 1.79, 4.87 -1.26
ILSXISS7/TejJ f 5.21 2.47   5 1.1 0.474 2.85, 8.94 -0.09
ILSXISS7/TejJ m 7.65 4.79   5 2.14 0.626 2.67, 14.5 0.51
ILSXISS80/TejJ f 8.82 2.13   5 0.951 0.241 7.18, 12.5 1.77
ILSXISS80/TejJ m 8.05 1.84   4 0.919 0.228 6.38, 10.6 0.68
ILSXISS84/TejJ f 4.13 1.91   5 0.854 0.463 2.6, 7.37 -0.65
ILSXISS84/TejJ m 4.78 0.392   5 0.175 0.0821 4.43, 5.45 -0.71
ILSXISS86/TejJ f 4.77 0.471   4 0.235 0.0987 4.26, 5.19 -0.32
ILSXISS86/TejJ m 5.25 0.796   5 0.356 0.152 4.07, 6.21 -0.51
ILSXISS89/TejJ f 3.52 0.532   4 0.266 0.151 2.84, 4.02 -0.96
ILSXISS89/TejJ m 4.51 1.18   4 0.588 0.261 3.56, 6.22 -0.82
ILSXISS90/TejJ f 7.07 2.41   5 1.08 0.342 5.13, 10.4 0.87
ILSXISS90/TejJ m 5.15 1.19   5 0.534 0.232 4.05, 6.99 -0.55
ILSXISS92/TejJ f 6.59 1.48   5 0.662 0.225 4.65, 8.37 0.62
ILSXISS92/TejJ m 8.49 1.88   5 0.843 0.222 6.91, 11.6 0.87
ILSXISS94/TejJ f 3.42 1.22   5 0.545 0.356 2.24, 5.12 -1.01
ILSXISS94/TejJ m 3.63 1.51   5 0.676 0.417 1.53, 5.35 -1.2
ILSXISS97/TejJ f 4.08 1.24   5 0.553 0.303 2.83, 6.03 -0.67
ILSXISS97/TejJ m 7.12 0.633   5 0.283 0.0888 6.6, 8.22 0.28
ILSXISS98/TejJ f 6.78 1.57   5 0.701 0.231 4.76, 8.37 0.72
ILSXISS98/TejJ m 8.68 0.641   5 0.287 0.0738 7.8, 9.33 0.95
ILSXISS99/TejJ f 8.23 2.93   5 1.31 0.356 4.47, 12.0 1.46
ILSXISS99/TejJ m 8.11 1.78   5 0.796 0.219 5.26, 9.8 0.7


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
ILSXISS100/TejJ f 4.8 0.8402 6.4541 3.1459
ILSXISS100/TejJ m 4.242 0.8402 5.8961 2.5879
ILSXISS103/TejJ f 4.85 0.8402 6.5041 3.1959
ILSXISS103/TejJ m 5.944 0.8402 7.5981 4.2899
ILSXISS107/TejJ f 3.355 0.9394 5.2044 1.5056
ILSXISS107/TejJ m 5.014 0.8402 6.6681 3.3599
ILSXISS110/TejJ f 7.056 0.8402 8.7101 5.4019
ILSXISS110/TejJ m 3.3067 1.0847 5.4421 1.1712
ILSXISS112/TejJ f 3.3225 0.9394 5.1719 1.4731
ILSXISS112/TejJ m 9.74 0.9394 11.5894 7.8906
ILSXISS114/TejJ f 4.565 0.9394 6.4144 2.7156
ILSXISS114/TejJ m 4.8333 1.0847 6.9688 2.6979
ILSXISS115/TejJ f 3.486 0.8402 5.1401 1.8319
ILSXISS115/TejJ m 8.042 0.8402 9.6961 6.3879
ILSXISS117 f 6.0 0.9394 7.8494 4.1506
ILSXISS117 m 4.376 0.8402 6.0301 2.7219
ILSXISS122/TejJ f 5.095 0.9394 6.9444 3.2456
ILSXISS122/TejJ m 2.806 0.8402 4.4601 1.1519
ILSXISS123/TejJ f 4.404 0.8402 6.0581 2.7499
ILSXISS123/TejJ m 5.625 0.9394 7.4744 3.7756
ILSXISS13/TejJ f 4.11 0.8402 5.7641 2.4559
ILSXISS13/TejJ m 4.766 0.8402 6.4201 3.1119
ILSXISS16/TejJ f 4.64 1.0847 6.7755 2.5045
ILSXISS16/TejJ m 5.572 0.8402 7.2261 3.9179
ILSXISS19/TejJ f 4.12 0.8402 5.7741 2.4659
ILSXISS19/TejJ m 5.89 0.8402 7.5441 4.2359
ILSXISS23/TejJ f 6.2813 0.4851 7.2363 5.3263
ILSXISS23/TejJ m 6.7911 0.6262 8.024 5.5582
ILSXISS24/TejJ f 12.532 0.8402 14.1861 10.8779
ILSXISS24/TejJ m 8.912 0.8402 10.5661 7.2579
ILSXISS25/TejJ f 8.114 0.8402 9.7681 6.4599
ILSXISS25/TejJ m 7.1 0.8402 8.7541 5.4459
ILSXISS26/TejJ f 5.87 0.8402 7.5241 4.2159
ILSXISS26/TejJ m 10.628 0.8402 12.2821 8.9739
ILSXISS3/TejJ f 5.292 0.8402 6.9461 3.6379
ILSXISS3/TejJ m 5.9233 1.0847 8.0588 3.7879
ILSXISS41/TejJ f 6.45 0.8402 8.1041 4.7959
ILSXISS41/TejJ m 5.75 0.8402 7.4041 4.0959
ILSXISS48/TejJ f 4.764 0.8402 6.4181 3.1099
ILSXISS48/TejJ m 6.23 0.8402 7.8841 4.5759
ILSXISS49/TejJ f 4.2 0.8402 5.8541 2.5459
ILSXISS49/TejJ m 5.8675 0.9394 7.7169 4.0181
ILSXISS51/TejJ f 6.568 0.8402 8.2221 4.9139
ILSXISS51/TejJ m 8.864 0.8402 10.5181 7.2099
ILSXISS56/TejJ f 7.27 0.8402 8.9241 5.6159
ILSXISS56/TejJ m 11.558 0.8402 13.2121 9.9039
ILSXISS66/TejJ f 3.5275 0.9394 5.3769 1.6781
ILSXISS66/TejJ m 4.515 0.9394 6.3644 2.6656
ILSXISS7/TejJ f 5.212 0.8402 6.8661 3.5579
ILSXISS7/TejJ m 7.646 0.8402 9.3001 5.9919
ILSXISS80/TejJ f 8.824 0.8402 10.4781 7.1699
ILSXISS80/TejJ m 8.05 0.9394 9.8994 6.2006
ILSXISS84/TejJ f 4.13 0.8402 5.7841 2.4759
ILSXISS84/TejJ m 4.776 0.8402 6.4301 3.1219
ILSXISS86/TejJ f 4.77 0.9394 6.6194 2.9206
ILSXISS86/TejJ m 5.25 0.8402 6.9041 3.5959
ILSXISS89/TejJ f 3.5225 0.9394 5.3719 1.6731
ILSXISS89/TejJ m 4.5125 0.9394 6.3619 2.6631
ILSXISS90/TejJ f 7.066 0.8402 8.7201 5.4119
ILSXISS90/TejJ m 5.148 0.8402 6.8021 3.4939
ILSXISS92/TejJ f 6.592 0.8402 8.2461 4.9379
ILSXISS92/TejJ m 8.486 0.8402 10.1401 6.8319
ILSXISS94/TejJ f 3.42 0.8402 5.0741 1.7659
ILSXISS94/TejJ m 3.626 0.8402 5.2801 1.9719
ILSXISS97/TejJ f 4.084 0.8402 5.7381 2.4299
ILSXISS97/TejJ m 7.122 0.8402 8.7761 5.4679
ILSXISS98/TejJ f 6.782 0.8402 8.4361 5.1279
ILSXISS98/TejJ m 8.68 0.8402 10.3341 7.0259
ILSXISS99/TejJ f 8.234 0.8402 9.8881 6.5799
ILSXISS99/TejJ m 8.114 0.8402 9.7681 6.4599


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
ILSXISS100/TejJ both 4.521 0.5941 5.6906 3.3514
ILSXISS103/TejJ both 5.397 0.5941 6.5666 4.2274
ILSXISS107/TejJ both 4.1845 0.6302 5.4251 2.9439
ILSXISS110/TejJ both 5.1813 0.686 6.5319 3.8307
ILSXISS112/TejJ both 6.5313 0.6642 7.839 5.2235
ILSXISS114/TejJ both 4.6992 0.7175 6.1116 3.2867
ILSXISS115/TejJ both 5.764 0.5941 6.9336 4.5944
ILSXISS117 both 5.188 0.6302 6.4286 3.9474
ILSXISS122/TejJ both 3.9505 0.6302 5.1911 2.7099
ILSXISS123/TejJ both 5.0145 0.6302 6.2551 3.7739
ILSXISS13/TejJ both 4.438 0.5941 5.6076 3.2684
ILSXISS16/TejJ both 5.106 0.686 6.4566 3.7554
ILSXISS19/TejJ both 5.005 0.5941 6.1746 3.8354
ILSXISS23/TejJ both 6.5362 0.3961 7.316 5.7565
ILSXISS24/TejJ both 10.722 0.5941 11.8916 9.5524
ILSXISS25/TejJ both 7.607 0.5941 8.7766 6.4374
ILSXISS26/TejJ both 8.249 0.5941 9.4186 7.0794
ILSXISS3/TejJ both 5.6077 0.686 6.9583 4.2571
ILSXISS41/TejJ both 6.1 0.5941 7.2696 4.9304
ILSXISS48/TejJ both 5.497 0.5941 6.6666 4.3274
ILSXISS49/TejJ both 5.0338 0.6302 6.2743 3.7932
ILSXISS51/TejJ both 7.716 0.5941 8.8856 6.5464
ILSXISS56/TejJ both 9.414 0.5941 10.5836 8.2444
ILSXISS66/TejJ both 4.0213 0.6642 5.329 2.7135
ILSXISS7/TejJ both 6.429 0.5941 7.5986 5.2594
ILSXISS80/TejJ both 8.437 0.6302 9.6776 7.1964
ILSXISS84/TejJ both 4.453 0.5941 5.6226 3.2834
ILSXISS86/TejJ both 5.01 0.6302 6.2506 3.7694
ILSXISS89/TejJ both 4.0175 0.6642 5.3252 2.7098
ILSXISS90/TejJ both 6.107 0.5941 7.2766 4.9374
ILSXISS92/TejJ both 7.539 0.5941 8.7086 6.3694
ILSXISS94/TejJ both 3.523 0.5941 4.6926 2.3534
ILSXISS97/TejJ both 5.603 0.5941 6.7726 4.4334
ILSXISS98/TejJ both 7.731 0.5941 8.9006 6.5614
ILSXISS99/TejJ both 8.174 0.5941 9.3436 7.0044




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA