Project measure / variable:   Schonfeld1   LW_BW

ID, description, units MPD:32362   LW_BW   liver weight as a percent of body weight   [%]  
Data set, strains Schonfeld1   inbred   11 strains     sex: both     age: 9-13wks
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Schonfeld1 - liver weight as a percent of body weight



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means4.47   % 4.40   %
Median of the strain means4.42   % 4.39   %
SD of the strain means± 0.496 ± 0.440
Coefficient of variation (CV)0.111 0.100
Min–max range of strain means3.65   –   5.21   % 3.85   –   5.27   %
Mean sample size per strain6.2   mice 5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0026 0.0026 0.0338 0.8546
strain 8 20.8642 2.608 33.441 < 0.0001
sex:strain 8 3.7711 0.4714 6.0443 < 0.0001
Residuals 86 6.707 0.078


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ f 3.65 0.382   10 0.121 0.105 3.03, 4.15 -1.66
129X1/SvJ m 3.91 0.192   5 0.086 0.0491 3.58, 4.06 -1.11
AKR/J f 4.93 0.268   5 0.12 0.0545 4.53, 5.27 0.92
BALB/cByJ f 5.21 0.196   10 0.0619 0.0376 4.93, 5.59 1.48
BALB/cByJ m 5.27 0.221   5 0.0988 0.0419 4.96, 5.54 1.98
BALB/cJ m 4.31 0.322   5 0.144 0.0748 3.98, 4.79 -0.2
C3H/HeJ f 4.76 0.383   5 0.171 0.0806 4.32, 5.22 0.57
C3H/HeJ m 4.48 0.223   5 0.0996 0.0498 4.13, 4.68 0.18
C57BL/6ByJ f 4.96 0.2   5 0.0895 0.0403 4.68, 5.14 0.98
C57BL/6ByJ m 4.73 0.239   5 0.107 0.0505 4.47, 5.11 0.75
C57BL/6J f 4.35 0.3   10 0.095 0.0691 3.81, 4.86 -0.25
C57BL/6J m 4.42 0.128   5 0.0571 0.0288 4.29, 4.57 0.05
DBA/1LacJ f 4.25 0.433   5 0.193 0.102 3.6, 4.81 -0.45
DBA/1LacJ m 4.36 0.135   5 0.0605 0.031 4.24, 4.58 -0.09
NZB/BlNJ f 4.49 0.164   5 0.0731 0.0364 4.25, 4.7 0.03
NZB/BlNJ m 3.85 0.324   5 0.145 0.084 3.42, 4.29 -1.25
PL/J f 4.28 0.545   4 0.272 0.127 3.96, 5.09 -0.39
PL/J m 3.94 0.193   5 0.0862 0.049 3.74, 4.14 -1.04
SWR/J f 3.87 0.0924   5 0.0413 0.0239 3.73, 3.99 -1.22
SWR/J m 4.73 0.241   5 0.108 0.051 4.51, 5.04 0.75


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ f 3.649 0.0883 3.8246 3.4734
129X1/SvJ m 3.914 0.1249 4.1623 3.6657
BALB/cByJ f 5.205 0.0883 5.3806 5.0294
BALB/cByJ m 5.268 0.1249 5.5163 5.0197
C3H/HeJ f 4.76 0.1249 5.0083 4.5117
C3H/HeJ m 4.476 0.1249 4.7243 4.2277
C57BL/6ByJ f 4.964 0.1249 5.2123 4.7157
C57BL/6ByJ m 4.726 0.1249 4.9743 4.4777
C57BL/6J f 4.346 0.0883 4.5216 4.1704
C57BL/6J m 4.424 0.1249 4.6723 4.1757
DBA/1LacJ f 4.25 0.1249 4.4983 4.0017
DBA/1LacJ m 4.356 0.1249 4.6043 4.1077
NZB/BlNJ f 4.49 0.1249 4.7383 4.2417
NZB/BlNJ m 3.854 0.1249 4.1023 3.6057
PL/J f 4.275 0.1396 4.5526 3.9974
PL/J m 3.936 0.1249 4.1843 3.6877
SWR/J f 3.866 0.1249 4.1143 3.6177
SWR/J m 4.73 0.1249 4.9783 4.4817


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ both 3.7815 0.0765 3.9335 3.6295
BALB/cByJ both 5.2365 0.0765 5.3885 5.0845
C3H/HeJ both 4.618 0.0883 4.7936 4.4424
C57BL/6ByJ both 4.845 0.0883 5.0206 4.6694
C57BL/6J both 4.385 0.0765 4.537 4.233
DBA/1LacJ both 4.303 0.0883 4.4786 4.1274
NZB/BlNJ both 4.172 0.0883 4.3476 3.9964
PL/J both 4.1055 0.0937 4.2917 3.9193
SWR/J both 4.298 0.0883 4.4736 4.1224




  GWAS USING LINEAR MIXED MODELS