Project measure / variable:   Schonfeld1   BW

ID, description, units MPD:32354   BW   body weight   [g]  
Data set, strains Schonfeld1   inbred   11 strains     sex: both     age: 9-13wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Schonfeld1 - body weight



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means19.8   g 25.7   g
Median of the strain means19.4   g 25.5   g
SD of the strain means± 3.15 ± 1.68
Coefficient of variation (CV)0.159 0.0655
Min–max range of strain means15.7   –   26.8   g 23.7   –   28.3   g
Mean sample size per strain6.2   mice 5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1160.832 1160.832 444.7162 < 0.0001
strain 8 237.3588 29.6699 11.3666 < 0.0001
sex:strain 8 65.6736 8.2092 3.145 0.0036
Residuals 87 227.094 2.6103


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ f 20.3 2.01   10 0.636 0.0989 17.6, 23.4 0.17
129X1/SvJ m 25.0 1.78   5 0.797 0.0714 23.3, 27.2 -0.42
AKR/J f 26.8 1.72   5 0.77 0.0643 25.3, 29.6 2.23
BALB/cByJ f 20.8 1.74   10 0.55 0.0834 18.1, 23.4 0.32
BALB/cByJ m 28.3 1.03   5 0.459 0.0363 27.3, 29.7 1.54
BALB/cJ m 23.7 1.75   5 0.784 0.0741 21.5, 26.1 -1.19
C3H/HeJ f 19.7 0.984   5 0.44 0.05 18.7, 20.9 -0.03
C3H/HeJ m 26.0 0.733   5 0.328 0.0282 25.3, 27.1 0.17
C57BL/6ByJ f 19.0 2.25   5 1.01 0.119 15.7, 22.0 -0.25
C57BL/6ByJ m 27.6 3.19   5 1.43 0.116 22.6, 30.8 1.12
C57BL/6J f 18.4 0.818   10 0.259 0.0444 17.1, 19.7 -0.44
C57BL/6J m 27.4 0.731   5 0.327 0.0267 26.2, 28.1 1.0
DBA/1LacJ f 18.3 0.799   5 0.357 0.0437 16.9, 18.8 -0.47
DBA/1LacJ m 24.6 1.1   5 0.491 0.0445 23.2, 25.9 -0.66
NZB/BlNJ f 22.3 0.381   5 0.17 0.0171 21.9, 22.7 0.8
NZB/BlNJ m 26.5 3.31   5 1.48 0.125 22.8, 30.8 0.47
PL/J f 15.7 0.606   5 0.271 0.0386 15.0, 16.6 -1.3
PL/J m 24.1 1.96   5 0.875 0.0812 22.1, 27.3 -0.96
SWR/J f 16.5 0.391   5 0.175 0.0238 16.0, 16.9 -1.04
SWR/J m 23.9 0.742   5 0.332 0.031 22.6, 24.4 -1.08


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ f 20.34 0.5109 21.3555 19.3245
129X1/SvJ m 24.96 0.7225 26.3961 23.5239
BALB/cByJ f 20.85 0.5109 21.8655 19.8345
BALB/cByJ m 28.26 0.7225 29.6961 26.8239
C3H/HeJ f 19.66 0.7225 21.0961 18.2239
C3H/HeJ m 26.02 0.7225 27.4561 24.5839
C57BL/6ByJ f 19.0 0.7225 20.4361 17.5639
C57BL/6ByJ m 27.6 0.7225 29.0361 26.1639
C57BL/6J f 18.43 0.5109 19.4455 17.4145
C57BL/6J m 27.4 0.7225 28.8361 25.9639
DBA/1LacJ f 18.26 0.7225 19.6961 16.8239
DBA/1LacJ m 24.64 0.7225 26.0761 23.2039
NZB/BlNJ f 22.3 0.7225 23.7361 20.8639
NZB/BlNJ m 26.52 0.7225 27.9561 25.0839
PL/J f 15.68 0.7225 17.1161 14.2439
PL/J m 24.12 0.7225 25.5561 22.6839
SWR/J f 16.46 0.7225 17.8961 15.0239
SWR/J m 23.9 0.7225 25.3361 22.4639


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ both 22.65 0.4425 23.5294 21.7706
BALB/cByJ both 24.555 0.4425 25.4344 23.6756
C3H/HeJ both 22.84 0.5109 23.8555 21.8245
C57BL/6ByJ both 23.3 0.5109 24.3155 22.2845
C57BL/6J both 22.915 0.4425 23.7944 22.0356
DBA/1LacJ both 21.45 0.5109 22.4655 20.4345
NZB/BlNJ both 24.41 0.5109 25.4255 23.3945
PL/J both 19.9 0.5109 20.9155 18.8845
SWR/J both 20.18 0.5109 21.1955 19.1645




  GWAS USING LINEAR MIXED MODELS