Project measure / variable:   Schonfeld1   GTT30

ID, description, units MPD:32304   GTT30   glucose levels during glucose tolerance test(10% glucose i.p., 5h fast)   [mg/dL]  at 30 min  
Data set, strains Schonfeld1   inbred   10 strains     sex: both     age: 9-13wks
Procedure glucose tolerance
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  STRAIN COMPARISON PLOT
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Schonfeld1 - glucose levels during glucose tolerance test(10% glucose i.p., 5h fast) at 30 min



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains9 strains
Mean of the strain means223   mg/dL 260   mg/dL
Median of the strain means224   mg/dL 262   mg/dL
SD of the strain means± 35.7 ± 33.7
Coefficient of variation (CV)0.160 0.130
Min–max range of strain means173   –   296   mg/dL 204   –   310   mg/dL
Mean sample size per strain5.0   mice 5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 26728.9 26728.9 32.2659 < 0.0001
strain 8 72994.6 9124.325 11.0145 < 0.0001
sex:strain 8 27240.6 3405.075 4.1105 0.0004
Residuals 72 59644.4 828.3944


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ f 203.0 12.9   5 5.79 0.0638 191.0, 220.0 -0.57
129X1/SvJ m 204.0 21.9   5 9.79 0.107 166.0, 221.0 -1.65
AKR/J f 203.0 8.96   5 4.01 0.0441 194.0, 217.0 -0.57
BALB/cByJ f 235.0 15.8   5 7.05 0.0671 213.0, 249.0 0.33
BALB/cByJ m 241.0 45.7   5 20.4 0.189 189.0, 312.0 -0.55
C3H/HeJ f 173.0 13.1   5 5.87 0.0761 165.0, 196.0 -1.41
C3H/HeJ m 232.0 30.7   5 13.7 0.132 204.0, 283.0 -0.82
C57BL/6ByJ f 232.0 29.3   5 13.1 0.126 199.0, 264.0 0.25
C57BL/6ByJ m 274.0 36.7   5 16.4 0.134 219.0, 320.0 0.43
C57BL/6J f 296.0 36.6   5 16.4 0.124 244.0, 329.0 2.04
C57BL/6J m 310.0 50.4   5 22.5 0.162 238.0, 364.0 1.49
DBA/1LacJ f 229.0 19.6   5 8.78 0.0858 201.0, 252.0 0.16
DBA/1LacJ m 239.0 8.43   5 3.77 0.0353 230.0, 252.0 -0.61
NZB/BlNJ f 257.0 47.0   5 21.0 0.183 205.0, 329.0 0.95
NZB/BlNJ m 262.0 12.9   5 5.76 0.0492 248.0, 277.0 0.07
PL/J f 218.0 12.9   5 5.79 0.0595 203.0, 236.0 -0.15
PL/J m 279.0 32.9   5 14.7 0.118 234.0, 322.0 0.57
SWR/J f 186.0 16.1   5 7.18 0.0864 168.0, 202.0 -1.04
SWR/J m 296.0 19.7   5 8.79 0.0664 268.0, 318.0 1.08


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ f 203.0 12.8716 228.6591 177.3409
129X1/SvJ m 203.8 12.8716 229.4591 178.1409
BALB/cByJ f 235.0 12.8716 260.6591 209.3409
BALB/cByJ m 241.4 12.8716 267.0591 215.7409
C3H/HeJ f 172.6 12.8716 198.2591 146.9409
C3H/HeJ m 232.2 12.8716 257.8591 206.5409
C57BL/6ByJ f 232.2 12.8716 257.8591 206.5409
C57BL/6ByJ m 274.2 12.8716 299.8591 248.5409
C57BL/6J f 295.6 12.8716 321.2591 269.9409
C57BL/6J m 310.0 12.8716 335.6591 284.3409
DBA/1LacJ f 228.8 12.8716 254.4591 203.1409
DBA/1LacJ m 239.0 12.8716 264.6591 213.3409
NZB/BlNJ f 256.6 12.8716 282.2591 230.9409
NZB/BlNJ m 262.0 12.8716 287.6591 236.3409
PL/J f 217.8 12.8716 243.4591 192.1409
PL/J m 279.0 12.8716 304.6591 253.3409
SWR/J f 185.8 12.8716 211.4591 160.1409
SWR/J m 296.0 12.8716 321.6591 270.3409


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ both 203.4 9.1016 221.5437 185.2563
BALB/cByJ both 238.2 9.1016 256.3437 220.0563
C3H/HeJ both 202.4 9.1016 220.5437 184.2563
C57BL/6ByJ both 253.2 9.1016 271.3437 235.0563
C57BL/6J both 302.8 9.1016 320.9437 284.6563
DBA/1LacJ both 233.9 9.1016 252.0437 215.7563
NZB/BlNJ both 259.3 9.1016 277.4437 241.1563
PL/J both 248.4 9.1016 266.5437 230.2563
SWR/J both 240.9 9.1016 259.0437 222.7563




  GWAS USING LINEAR MIXED MODELS