Phenotype measure:   CGDpheno1   HCT

ID, description, units MPD:31825   HCT   hematocrit (HCT)   [%]
Data set, strains CGDpheno1   inbred w/CC8   72 strains     sex: both     age: 11wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

CGDpheno1 - hematocrit (HCT)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested71 strains72 strains
Mean of the strain means49.3   % 49.5   %
Median of the strain means49.6   % 49.9   %
SD of the strain means± 2.60 ± 2.96
Coefficient of variation (CV)0.0527 0.0597
Min–max range of strain means42.9   –   56.2   % 38.0   –   56.6   %
Mean sample size per strain7.2   mice 6.8   mice


  STRAIN MEANS (SUBMITTER-ADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 48.7 2.81   7 1.06 0.0578 -0.22
129S1/SvImJ m 48.6 2.7   7 1.02 0.0556 -0.29
A/J f 46.4 2.78   8 0.982 0.0599 -1.1
A/J m 46.0 2.72   8 0.961 0.0591 -1.17
AKR/J f 50.7 2.74   7 1.04 0.0542 0.55
AKR/J m 46.4 2.78   8 0.982 0.0599 -1.04
ALR/LtJ f 45.7 2.74   8 0.969 0.06 -1.37
ALR/LtJ m 45.1 2.74   8 0.969 0.0608 -1.48
ALS/LtJ f 50.9 2.5   6 1.02 0.0492 0.63
ALS/LtJ m 52.4 2.45   6 0.998 0.0466 0.99
BALB/cByJ f 48.3 2.9   8 1.03 0.06 -0.37
BALB/cByJ m 47.8 2.82   7 1.06 0.0589 -0.57
BPH/2J f 50.4 2.62   7 0.989 0.0519 0.44
BPH/2J m 50.1 2.46   7 0.93 0.0491 0.21
BPL/1J f 49.9 2.46   7 0.932 0.0494 0.25
BPL/1J m 47.7 2.41   7 0.912 0.0506 -0.6
BPN/3J f 51.5 2.42   8 0.855 0.0469 0.86
BPN/3J m 50.1 2.51   7 0.948 0.0501 0.21
BTBR T+ Itpr3tf/J f 43.8 3.1   8 1.1 0.0707 -2.1
BTBR T+ Itpr3tf/J m 47.3 2.89   6 1.18 0.061 -0.73
BUB/BnJ f 49.8 2.84   7 1.07 0.057 0.21
BUB/BnJ m 46.5 2.66   4 1.33 0.0572 -1.01
C3H/HeJ f 46.4 2.74   7 1.04 0.0592 -1.1
C3H/HeJ m 47.4 2.7   7 1.02 0.0569 -0.7
C57BL/6J f 49.8 3.99   115 0.372 0.0801 0.21
C57BL/6J m 50.3 3.68   91 0.386 0.0732 0.28
C57BR/cdJ f 52.9 2.45   8 0.866 0.0464 1.4
C57BR/cdJ m 53.2 2.45   8 0.866 0.0461 1.26
C57L/J f 54.1 2.67   4 1.34 0.0494 1.86
C57L/J m 52.6 3.01   7 1.14 0.0573 1.06
C58/J f 49.9 2.99   7 1.13 0.06 0.25
C58/J m 50.8 2.89   6 1.18 0.0568 0.45
CALB/RkJ m 51.4 2.42   5 1.08 0.0471 0.65
CAST/EiJ f 49.1 2.42   7 0.913 0.0492 -0.06
CAST/EiJ m 50.5 2.44   8 0.862 0.0483 0.35
CBA/CaJ f 47.7 2.86   8 1.01 0.0599 -0.6
CBA/CaJ m 50.0 2.47   5 1.1 0.0494 0.18
CE/J f 56.2 2.58   6 1.05 0.0459 2.67
CE/J m 56.6 2.45   6 1.0 0.0432 2.41
CZECHI/EiJ f 46.9 2.45   6 0.999 0.0521 -0.91
CZECHI/EiJ m 48.6 2.45   6 0.999 0.0504 -0.29
CZECHII/EiJ f 52.2 2.46   8 0.87 0.0472 1.13
CZECHII/EiJ m 50.4 2.46   8 0.868 0.0487 0.31
DBA/1J f 49.5 2.78   7 1.05 0.0562 0.09
DBA/1J m 51.3 2.58   8 0.912 0.0503 0.62
DBA/2J f 45.1 2.5   7 0.946 0.0554 -1.6
DBA/2J m 46.7 2.64   7 0.998 0.0566 -0.94
DDY/JclSidSeyFrkJ f 46.3 2.48   8 0.877 0.0536 -1.14
DDY/JclSidSeyFrkJ m 45.6 2.4   5 1.07 0.0525 -1.31
EL/SuzSeyFrkJ f 51.2 2.87   11 0.866 0.056 0.75
EL/SuzSeyFrkJ m 51.0 2.43   4 1.21 0.0476 0.52
FVB/NJ f 42.9 2.81   7 1.06 0.0657 -2.45
FVB/NJ m 43.8 2.79   8 0.986 0.0638 -1.92
I/LnJ f 48.3 2.8   8 0.99 0.058 -0.37
I/LnJ m 48.2 2.52   6 1.03 0.0523 -0.43
JF1/MsJ f 48.5 2.48   8 0.876 0.0511 -0.29
JF1/MsJ m 47.6 2.49   8 0.882 0.0524 -0.63
KK/HlJ f 46.9 2.47   8 0.875 0.0528 -0.91
KK/HlJ m 47.0 2.49   8 0.88 0.0529 -0.84
LEWES/EiJ f 45.6 2.38   6 0.973 0.0523 -1.41
LEWES/EiJ m 47.9 2.36   6 0.964 0.0493 -0.53
LG/J f 54.0 2.75   8 0.974 0.051 1.83
LG/J m 53.0 2.47   7 0.932 0.0465 1.19
LP/J f 50.7 2.73   8 0.965 0.0539 0.55
LP/J m 50.7 2.58   8 0.914 0.051 0.42
LT/SvEiJ f 51.0 2.51   6 1.03 0.0493 0.67
LT/SvEiJ m 49.9 2.62   7 0.99 0.0525 0.15
MA/MyJ f 50.4 2.65   7 1.0 0.0526 0.44
MA/MyJ m 50.3 2.58   6 1.05 0.0513 0.28
MOLF/EiJ f 46.3 2.42   7 0.916 0.0524 -1.14
MOLF/EiJ m 48.0 2.4   5 1.07 0.0501 -0.5
MRL/MpJ f 51.0 3.01   7 1.14 0.059 0.67
MRL/MpJ m 51.8 3.12   8 1.1 0.0602 0.79
MSM/MsJ f 47.0 2.46   7 0.928 0.0522 -0.87
MSM/MsJ m 46.4 2.54   8 0.9 0.0548 -1.04
NH/KiPtJ f 52.8 2.45   8 0.867 0.0465 1.36
NH/KiPtJ m 49.9 2.42   7 0.913 0.0485 0.15
NOD/ShiLtJ f 49.4 2.72   8 0.961 0.0551 0.05
NOD/ShiLtJ m 52.4 2.72   8 0.961 0.0518 0.99
NON/ShiLtJ f 52.1 2.49   8 0.882 0.0479 1.09
NON/ShiLtJ m 48.1 2.67   7 1.01 0.0556 -0.46
NOR/LtJ f 47.9 2.93   8 1.03 0.061 -0.52
NOR/LtJ m 51.7 2.51   8 0.889 0.0487 0.75
NZB/BlNJ f 47.0 2.99   7 1.13 0.0637 -0.87
NZB/BlNJ m 51.0 2.51   6 1.03 0.0493 0.52
NZL/LtJ f 48.5 2.4   6 0.979 0.0495 -0.29
NZL/LtJ m 49.5 2.51   7 0.948 0.0506 0.01
NZM2410/J f 45.2 2.62   8 0.925 0.0579 -1.56
NZM2410/J m 47.9 2.5   7 0.945 0.0521 -0.53
NZO/HlLtJ f 51.3 2.43   4 1.22 0.0475 0.79
NZO/HlLtJ m 56.1 2.47   8 0.875 0.0441 2.24
NZW/LacJ f 49.7 2.86   8 1.01 0.0576 0.17
NZW/LacJ m 47.4 2.58   6 1.05 0.0544 -0.7
PANCEVO/EiJ f 46.7 2.35   4 1.17 0.0503 -0.99
PANCEVO/EiJ m 47.4 2.39   6 0.976 0.0505 -0.7
PERA/EiJ f 50.6 2.44   7 0.921 0.0482 0.52
PERA/EiJ m 53.0 2.35   5 1.05 0.0444 1.19
PERC/EiJ f 47.9 2.4   6 0.979 0.0501 -0.52
PERC/EiJ m 47.3 2.41   7 0.91 0.051 -0.73
P/J f 53.1 2.52   7 0.954 0.0475 1.48
P/J m 52.3 2.58   6 1.05 0.0494 0.96
PL/J f 49.8 2.74   8 0.969 0.0551 0.21
PL/J m 48.5 2.78   7 1.05 0.0574 -0.33
PN/nBSwUmabJ f 48.5 2.41   5 1.08 0.0496 -0.29
PN/nBSwUmabJ m 47.5 2.41   5 1.08 0.0507 -0.67
PWD/PhJ f 48.7 2.74   8 0.969 0.0563 -0.22
PWD/PhJ m 50.5 2.74   8 0.969 0.0543 0.35
PWK/PhJ f 49.6 2.75   8 0.974 0.0555 0.13
PWK/PhJ m 50.1 2.75   8 0.974 0.055 0.21
RBA/DnJ f 48.6 2.45   7 0.925 0.0503 -0.25
RBA/DnJ m 49.0 2.48   8 0.877 0.0507 -0.16
RBF/DnJ f 48.3 2.98   8 1.05 0.0617 -0.37
RBF/DnJ m 47.7 2.98   8 1.05 0.0624 -0.6
RF/J f 52.6 2.49   7 0.943 0.0475 1.29
RF/J m 51.5 2.42   7 0.916 0.047 0.69
RIIIS/J f 50.1 2.42   8 0.856 0.0483 0.32
RIIIS/J m 49.9 2.38   7 0.899 0.0476 0.15
SB/LeJ f 44.3 2.36   6 0.964 0.0533 -1.91
SB/LeJ m 38.0 2.42   8 0.855 0.0637 -3.88
SEA/GnJ f 51.6 2.4   6 0.98 0.0466 0.9
SEA/GnJ m 53.3 2.38   6 0.97 0.0446 1.3
SF/CamEiJ f 46.0 2.72   6 1.11 0.0591 -1.26
SF/CamEiJ m 47.4 2.58   8 0.913 0.0545 -0.7
SJL/J f 50.1 3.12   8 1.1 0.0623 0.32
SJL/J m 54.3 2.67   4 1.34 0.0492 1.63
SKIVE/EiJ f 46.7 2.47   8 0.873 0.0529 -0.99
SKIVE/EiJ m 46.7 2.48   8 0.878 0.0531 -0.94
SM/J f 49.7 3.1   8 1.1 0.0623 0.17
SM/J m 50.1 2.74   8 0.969 0.0547 0.21
SOD1/EiJ f 52.5 2.75   8 0.974 0.0525 1.25
SOD1/EiJ m 55.2 2.51   6 1.03 0.0456 1.94
SPRET/EiJ f 50.6 2.44   7 0.924 0.0483 0.52
SPRET/EiJ m 53.8 2.36   5 1.06 0.0439 1.46
SWR/J f 51.6 2.47   8 0.872 0.0478 0.9
SWR/J m 49.7 2.75   8 0.971 0.0552 0.08
TALLYHO/JngJ f 49.8 2.56   7 0.968 0.0514 0.21
TALLYHO/JngJ m 50.0 2.5   7 0.944 0.0499 0.18
TIRANO/EiJ f 49.2 2.43   8 0.859 0.0494 -0.02
TIRANO/EiJ m 49.1 2.37   6 0.966 0.0482 -0.13
WSB/EiJ f 49.3 2.43   7 0.918 0.0492 0.01
WSB/EiJ m 50.2 2.36   6 0.961 0.0469 0.25
ZALENDE/EiJ f 51.8 2.53   7 0.956 0.0489 0.98
ZALENDE/EiJ m 46.4 2.38   4 1.19 0.0512 -1.04




  GWAS USING LINEAR MIXED MODELS