Phenotype measure:   Moy1   SnOBJ_soc

ID, description, units MPD:30105   SnOBJ_soc   time spent sniffing empty cage (a novel object), 10 min test   [s]
Data set, strains Moy1   inbred   17 strains     sex: m     age: 6-7wks
Procedure three chamber assay
Ontology mappings

  STRAIN COMPARISON PLOT
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Moy1 - time spent sniffing empty cage (a novel object), 10 min test



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested17 strains
Mean of the strain means23.6   s
Median of the strain means22.1   s
SD of the strain means± 9.44
Coefficient of variation (CV)0.401
Min–max range of strain means10.1   –   52.5   s
Mean sample size per strain22.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 16 29459.4049 1841.2128 5.2329 < 0.0001
Residuals 368 129482.5735 351.8548


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 22.1 26.3   20 5.89 1.19 -0.16
A/J m 23.4 26.5   19 6.09 1.13 -0.02
AKR/J m 22.9 14.1   39 2.25 0.615 5.8, 61.7 -0.07
BALB/cByJ m 21.8 28.2   20 6.32 1.3 -0.19
BTBR T+ Itpr3tf/J m 10.1 7.54   24 1.54 0.75 -1.43
C3H/HeJ m 33.0 23.6   19 5.42 0.715 1.0
C57BL/6J m 22.2 15.3   40 2.42 0.689 3.0, 71.6 -0.14
C57L/J m 21.4 12.5   19 2.86 0.583 3.6, 51.6 -0.23
C58/J m 26.4 14.6   20 3.26 0.553 4.3, 53.0 0.3
DBA/2J m 16.7 11.0   38 1.78 0.658 1.1, 58.2 -0.73
FVB/NJ m 16.6 17.6   17 4.28 1.06 1.8, 73.4 -0.74
NOD/ShiLtJ m 52.5 29.8   20 6.66 0.567 6.3, 106.0 3.07
NZB/BlNJ m 19.5 20.9   20 4.67 1.07 1.1, 85.3 -0.43
PERA/EiJ m 29.2 17.2   10 5.43 0.588 9.0, 65.0 0.6
PL/J m 13.4 5.98   20 1.34 0.444 5.0, 25.4 -1.08
SJL/J m 29.6 26.1   21 5.7 0.882 4.0, 87.3 0.64
SWR/J m 19.8 10.8   19 2.47 0.545 4.8, 42.1 -0.4


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 22.145 4.1944 30.3929 13.8971
A/J m 23.4368 4.3033 31.8991 14.9746
AKR/J m 22.8769 3.0037 28.7834 16.9705
BALB/cByJ m 21.775 4.1944 30.0229 13.5271
BTBR T+ Itpr3tf/J m 10.05 3.8289 17.5793 2.5207
C3H/HeJ m 33.0211 4.3033 41.4833 24.5588
C57BL/6J m 22.23 2.9659 28.0622 16.3978
C57L/J m 21.3526 4.3033 29.8148 12.8904
C58/J m 26.35 4.1944 34.5979 18.1021
DBA/2J m 16.6553 3.0429 22.6389 10.6716
FVB/NJ m 16.6412 4.5494 25.5873 7.695
NOD/ShiLtJ m 52.49 4.1944 60.7379 44.2421
NZB/BlNJ m 19.48 4.1944 27.7279 11.2321
PERA/EiJ m 29.21 5.9317 40.8743 17.5457
PL/J m 13.45 4.1944 21.6979 5.2021
SJL/J m 29.6095 4.0933 37.6587 21.5604
SWR/J m 19.7895 4.3033 28.2517 11.3273




  GWAS USING LINEAR MIXED MODELS