Project measure / variable:   Korstanje1   MA_M24


  STRAIN COMPARISON PLOT
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Korstanje1 - microalbumin (urine MA) at age 24mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested24 strains24 strains
Mean of the strain means10.6   mg/dL 12.5   mg/dL
Median of the strain means5.07   mg/dL 6.75   mg/dL
SD of the strain means± 12.0 ± 15.5
Coefficient of variation (CV)1.13 1.24
Min–max range of strain means0   –   48.4   mg/dL 0.0850   –   60.7   mg/dL
Mean sample size per strain7.2   mice 6.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 393.8544 393.8544 1.3295 0.2499
strain 22 36572.5085 1662.3867 5.6117 < 0.0001
sex:strain 22 21323.3982 969.2454 3.2718 < 0.0001
Residuals 274 81169.2086 296.238


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 17.5 18.4   8 6.49 1.05 0.58
129S1/SvImJ m 11.3 9.42   6 3.85 0.833 0.44, 24.4 -0.08
A/J f 16.2 19.1   9 6.38 1.18 0.47
A/J m 45.3 23.6   4 11.8 0.52 18.6, 74.6 2.12
BALB/cByJ f 0.0 0.0   7 0.0 0.0 -0.88
BALB/cByJ m 3.2 7.05   7 2.66 2.2 -0.6
BTBR T+ Itpr3tf/J m 0.258 0.577   5 0.258 2.24 -0.79
BUB/BnJ f 26.1 35.7   6 14.6 1.37 1.3
BUB/BnJ m 2.29 2.72   6 1.11 1.19 -0.66
C3H/HeJ f 7.14 9.87   10 3.12 1.38 -0.29
C3H/HeJ m 3.05 3.62   8 1.28 1.19 -0.61
C57BL/10J f 4.33 2.5   9 0.835 0.578 -0.52
C57BL/10J m 11.8 5.71   9 1.9 0.482 3.57, 21.8 -0.05
C57BL/6J f 3.14 7.29   6 2.98 2.32 -0.62
C57BL/6J m 0.085 0.208   6 0.085 2.45 -0.8
C57BLKS/J f 1.27 1.98   8 0.701 1.56 -0.78
C57BLKS/J m 15.4 22.4   9 7.47 1.46 1.56, 72.6 0.19
C57BR/cdJ f 4.21 5.72   6 2.34 1.36 -0.53
C57BR/cdJ m 1.2 3.01   7 1.14 2.5 -0.73
C57L/J f 3.68 5.42   6 2.21 1.47 -0.57
C57L/J m 7.91 7.83   7 2.96 0.99 -0.3
CBA/J f 4.43 6.58   8 2.33 1.49 -0.51
CBA/J m 2.58 2.47   7 0.934 0.956 -0.64
DBA/2J f 0.973 1.95   6 0.797 2.01 -0.8
DBA/2J m 5.25 5.18   6 2.11 0.987 -0.47
FVB/NJ f 4.21 10.4   8 3.67 2.47 -0.53
FVB/NJ m 34.3 26.0   7 9.83 0.758 7.92, 68.1 1.41
LP/J f 5.13 8.03   8 2.84 1.56 -0.45
LP/J m 0.413 1.09   7 0.413 2.65 -0.78
NOD.B10Sn-H2b/J f 1.82 2.5   5 1.12 1.37 -0.73
NOD.B10Sn-H2b/J m 1.47 1.19   6 0.485 0.809 -0.71
NON/ShiLtJ f 33.2 33.0   9 11.0 0.994 0.58, 86.6 1.89
NON/ShiLtJ m 12.7 24.5   6 10.0 1.93 0.61, 62.6 0.01
NZW/LacJ f 5.01 5.94   7 2.24 1.19 0.44, 16.2 -0.46
NZW/LacJ m 29.5 44.5   6 18.2 1.51 0.58, 95.4 1.1
P/J f 3.64 3.43   7 1.3 0.941 -0.58
PWD/PhJ f 10.8 6.82   7 2.58 0.629 5.54, 24.4 0.02
PWD/PhJ m 17.4 14.2   8 5.01 0.812 3.43, 39.5 0.31
RIIIS/J f 8.34 6.85   6 2.8 0.822 1.56, 19.4 -0.19
RIIIS/J m 9.89 4.55   6 1.86 0.46 4.01, 15.8 -0.17
SJL/J f 48.4 43.5   6 17.7 0.899 3.16
SJL/J m 2.66 2.18   4 1.09 0.818 -0.64
SM/J f 9.04 17.7   6 7.22 1.96 -0.13
SM/J m 16.4 19.9   7 7.53 1.21 0.25
SWR/J f 7.83 14.7   8 5.21 1.88 -0.23
SWR/J m 5.58 13.3   7 5.04 2.39 -0.45
WSB/EiJ f 27.3 30.0   7 11.4 1.1 4.49, 88.5 1.4
WSB/EiJ m 60.7 37.3   8 13.2 0.613 8.4, 95.3 3.11


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 17.475 6.0852 29.4547 5.4953
129S1/SvImJ m 11.305 7.0266 25.138 -2.528
A/J f 16.1967 5.7372 27.4912 4.9021
A/J m 45.3 8.6058 62.2419 28.3581
BALB/cByJ f 0.0 6.5054 12.8068 -12.8068
BALB/cByJ m 3.2 6.5054 16.0068 -9.6068
BUB/BnJ f 26.065 7.0266 39.898 12.232
BUB/BnJ m 2.2883 7.0266 16.1213 -11.5446
C3H/HeJ f 7.143 5.4428 17.858 -3.572
C3H/HeJ m 3.0513 6.0852 15.031 -8.9285
C57BL/10J f 4.3333 5.7372 15.6279 -6.9612
C57BL/10J m 11.8456 5.7372 23.1401 0.551
C57BL/6J f 3.1367 7.0266 16.9696 -10.6963
C57BL/6J m 0.085 7.0266 13.918 -13.748
C57BLKS/J f 1.2662 6.0852 13.246 -10.7135
C57BLKS/J m 15.3633 5.7372 26.6579 4.0688
C57BR/cdJ f 4.2067 7.0266 18.0396 -9.6263
C57BR/cdJ m 1.2043 6.5054 14.0111 -11.6026
C57L/J f 3.68 7.0266 17.513 -10.153
C57L/J m 7.9143 6.5054 20.7211 -4.8926
CBA/J f 4.4313 6.0852 16.411 -7.5485
CBA/J m 2.5843 6.5054 15.3911 -10.2226
DBA/2J f 0.9733 7.0266 14.8063 -12.8596
DBA/2J m 5.2483 7.0266 19.0813 -8.5846
FVB/NJ f 4.2088 6.0852 16.1885 -7.771
FVB/NJ m 34.3114 6.5054 47.1183 21.5046
LP/J f 5.135 6.0852 17.1147 -6.8447
LP/J m 0.4129 6.5054 13.2197 -12.394
NOD.B10Sn-H2b/J f 1.822 7.6972 16.9753 -13.3313
NOD.B10Sn-H2b/J m 1.47 7.0266 15.303 -12.363
NON/ShiLtJ f 33.1933 5.7372 44.4879 21.8988
NON/ShiLtJ m 12.7 7.0266 26.533 -1.133
NZW/LacJ f 5.0114 6.5054 17.8183 -7.7954
NZW/LacJ m 29.535 7.0266 43.368 15.702
PWD/PhJ f 10.8471 6.5054 23.654 -1.9597
PWD/PhJ m 17.4312 6.0852 29.411 5.4515
RIIIS/J f 8.3433 7.0266 22.1763 -5.4896
RIIIS/J m 9.8867 7.0266 23.7196 -3.9463
SJL/J f 48.3567 7.0266 62.1896 34.5237
SJL/J m 2.6625 8.6058 19.6044 -14.2794
SM/J f 9.0367 7.0266 22.8696 -4.7963
SM/J m 16.4171 6.5054 29.224 3.6103
SWR/J f 7.825 6.0852 19.8047 -4.1547
SWR/J m 5.58 6.5054 18.3868 -7.2268
WSB/EiJ f 27.3486 6.5054 40.1554 14.5417
WSB/EiJ m 60.7375 6.0852 72.7172 48.7578


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 14.39 4.6477 23.5396 5.2404
A/J both 30.7483 5.1714 40.9291 20.5675
BALB/cByJ both 1.6 4.6 10.6558 -7.4558
BUB/BnJ both 14.1767 4.9686 23.9581 4.3953
C3H/HeJ both 5.0971 4.0821 13.1334 -2.9391
C57BL/10J both 8.0894 4.0568 16.0759 0.103
C57BL/6J both 1.6108 4.9686 11.3922 -8.1706
C57BLKS/J both 8.3148 4.1817 16.5471 0.0825
C57BR/cdJ both 2.7055 4.7878 12.1311 -6.7201
C57L/J both 5.7971 4.7878 15.2227 -3.6284
CBA/J both 3.5078 4.4539 12.276 -5.2605
DBA/2J both 3.1108 4.9686 12.8922 -6.6706
FVB/NJ both 19.2601 4.4539 28.0283 10.4918
LP/J both 2.7739 4.4539 11.5422 -5.9943
NOD.B10Sn-H2b/J both 1.646 5.2111 11.9048 -8.6128
NON/ShiLtJ both 22.9467 4.5356 31.8758 14.0175
NZW/LacJ both 17.2732 4.7878 26.6988 7.8476
PWD/PhJ both 14.1392 4.4539 22.9074 5.371
RIIIS/J both 9.115 4.9686 18.8964 -0.6664
SJL/J both 25.5096 5.555 36.4455 14.5737
SM/J both 12.7269 4.7878 22.1525 3.3013
SWR/J both 6.7025 4.4539 15.4707 -2.0657
WSB/EiJ both 44.043 4.4539 52.8113 35.2748




  GWAS USING LINEAR MIXED MODELS