Project measure / variable:   Nadeau1   bw_diet

ID, description, units MPD:28302   bw_diet   body weight   [g]  after 12wks on diet  
high-fat diet study
Data set, strains Nadeau1   B6.A consomic w/par   24 strains     sex: m     age: 5wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Nadeau1 - body weight after 12wks on diet



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested24 strains
Mean of the strain means36.3   g
Median of the strain means35.6   g
SD of the strain means± 4.40
Coefficient of variation (CV)0.121
Min–max range of strain means30.5   –   45.7   g
Mean sample size per strain17.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 23 7633.2299 331.8796 16.7782 < 0.0001
Residuals 398 7872.6053 19.7804


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J m 31.5 3.8   25 0.76 0.121 23.9, 38.8 -1.09
B6.A-Chr1 m 42.3 5.2   17 1.26 0.123 32.6, 51.1 1.37
B6.A-Chr10 m 35.0 7.16   13 1.99 0.204 26.4, 49.1 -0.29
B6.A-Chr11 m 36.2 5.64   14 1.51 0.156 27.4, 49.5 -0.02
B6.A-Chr12 m 32.8 4.85   13 1.34 0.148 20.9, 41.1 -0.79
B6.A-Chr13 m 36.0 4.56   20 1.02 0.126 29.3, 46.7 -0.06
B6.A-Chr14 m 35.6 3.96   17 0.959 0.111 28.4, 43.6 -0.15
B6.A-Chr15 m 34.7 2.45   21 0.535 0.0707 30.1, 42.2 -0.36
B6.A-Chr16 m 36.7 4.41   20 0.985 0.12 27.7, 47.4 0.1
B6.A-Chr17 m 32.3 2.95   20 0.659 0.0912 27.8, 40.9 -0.9
B6.A-Chr18 m 36.5 4.29   11 1.29 0.118 28.8, 42.7 0.05
B6.A-Chr19 m 42.6 6.27   18 1.48 0.147 32.5, 56.1 1.44
B6.A-Chr2 m 43.6 5.18   12 1.5 0.119 32.4, 52.3 1.67
B6.A-Chr3 m 31.6 4.19   16 1.05 0.133 26.5, 40.9 -1.06
B6.A-Chr4 m 31.6 3.11   20 0.694 0.0983 28.0, 41.3 -1.06
B6.A-Chr5 m 37.4 4.27   20 0.955 0.114 28.3, 45.9 0.26
B6.A-Chr6 m 33.5 4.26   14 1.14 0.127 25.1, 39.1 -0.63
B6.A-Chr7 m 30.5 2.71   18 0.638 0.0889 25.6, 34.6 -1.31
B6.A-Chr8 m 33.1 3.59   20 0.802 0.108 28.8, 39.7 -0.72
B6.A-Chr9 m 40.6 5.49   17 1.33 0.135 31.2, 52.0 0.98
B6.A-ChrX m 45.7 5.13   16 1.28 0.112 35.9, 54.3 2.14
B6.A-ChrY m 32.5 3.41   17 0.827 0.105 27.7, 39.4 -0.86
B6.A-mt m 35.6 2.99   23 0.624 0.0841 30.1, 40.5 -0.15
C57BL/6J m 42.7 5.96   20 1.33 0.14 31.7, 51.7 1.46


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 31.484 0.8895 33.2327 29.7353
B6.A-Chr1 m 42.2941 1.0787 44.4147 40.1735
B6.A-Chr10 m 35.0308 1.2335 37.4558 32.6057
B6.A-Chr11 m 36.1643 1.1886 38.5011 33.8275
B6.A-Chr12 m 32.7923 1.2335 35.2173 30.3673
B6.A-Chr13 m 36.045 0.9945 38.0001 34.0899
B6.A-Chr14 m 35.5824 1.0787 37.703 33.4617
B6.A-Chr15 m 34.719 0.9705 36.627 32.811
B6.A-Chr16 m 36.74 0.9945 38.6951 34.7849
B6.A-Chr17 m 32.325 0.9945 34.2801 30.3699
B6.A-Chr18 m 36.4818 1.341 39.1181 33.8455
B6.A-Chr19 m 42.5944 1.0483 44.6553 40.5336
B6.A-Chr2 m 43.55 1.2839 46.074 41.026
B6.A-Chr3 m 31.575 1.1119 33.7609 29.3891
B6.A-Chr4 m 31.585 0.9945 33.5401 29.6299
B6.A-Chr5 m 37.405 0.9945 39.3601 35.4499
B6.A-Chr6 m 33.5286 1.1886 35.8654 31.1918
B6.A-Chr7 m 30.4722 1.0483 32.5331 28.4113
B6.A-Chr8 m 33.12 0.9945 35.0751 31.1649
B6.A-Chr9 m 40.5941 1.0787 42.7147 38.4735
B6.A-ChrX m 45.6812 1.1119 47.8671 43.4954
B6.A-ChrY m 32.4647 1.0787 34.5853 30.3441
B6.A-mt m 35.5826 0.9274 37.4058 33.7594
C57BL/6J m 42.71 0.9945 44.6651 40.7549




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA