Phenotype measure:   Svenson3   pctRetic

ID, description, units MPD:27392   pctRetic   reticulocyte differential (Retic; percentage of total RBC)   [%]
Data set, strains Svenson3   B6.PWD consomic w/par   27 strains     sex: both     age: 7wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Svenson3 - reticulocyte differential (Retic; percentage of total RBC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested27 strains26 strains
Mean of the strain means3.46   % 3.77   %
Median of the strain means3.34   % 3.85   %
SD of the strain means± 1.23 ± 0.958
Coefficient of variation (CV)0.356 0.254
Min–max range of strain means0.786   –   5.70   % 2.26   –   5.68   %
Mean sample size per strain7.8   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 10.8059 10.8059 7.183 0.0077
strain 25 375.125 15.005 9.9742 < 0.0001
sex:strain 25 93.1717 3.7269 2.4773 0.0001
Residuals 360 541.5767 1.5044


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 5.15 2.71   8 0.959 0.527 2.3, 10.6 1.38
B6.PWD-Chr1 m 3.59 1.3   10 0.41 0.361 2.2, 6.2 -0.19
B6.PWD-Chr10.1 f 5.58 2.85   12 0.821 0.51 3.4, 14.0 1.73
B6.PWD-Chr10.1 m 5.68 2.66   6 1.09 0.469 4.2, 11.1 1.99
B6.PWD-Chr10.2 f 5.7 2.1   3 1.21 0.368 3.4, 7.5 1.83
B6.PWD-Chr10.3 f 5.11 0.472   10 0.149 0.0925 4.5, 6.0 1.35
B6.PWD-Chr10.3 m 5.14 0.484   8 0.171 0.0942 4.2, 5.9 1.43
B6.PWD-Chr11.1 f 3.34 0.852   9 0.284 0.255 2.2, 4.9 -0.09
B6.PWD-Chr11.1 m 4.26 0.744   8 0.263 0.175 3.3, 5.5 0.51
B6.PWD-Chr11.2 f 2.33 0.501   8 0.177 0.215 1.5, 3.2 -0.92
B6.PWD-Chr11.2 m 3.33 0.715   8 0.253 0.215 2.1, 4.1 -0.46
B6.PWD-Chr11.3 f 3.38 1.83   8 0.647 0.542 1.3, 7.2 -0.06
B6.PWD-Chr11.3 m 4.99 2.66   8 0.941 0.534 2.4, 9.0 1.27
B6.PWD-Chr12 f 3.41 0.508   8 0.18 0.149 3.0, 4.2 -0.04
B6.PWD-Chr12 m 4.05 0.67   8 0.237 0.165 3.1, 4.8 0.29
B6.PWD-Chr13 f 4.53 0.997   8 0.352 0.22 3.0, 5.7 0.87
B6.PWD-Chr13 m 4.92 1.09   9 0.363 0.221 3.2, 7.0 1.2
B6.PWD-Chr14 f 3.1 1.27   8 0.448 0.409 1.2, 4.5 -0.29
B6.PWD-Chr14 m 3.02 1.12   8 0.397 0.371 1.8, 4.4 -0.79
B6.PWD-Chr15 f 4.11 0.706   8 0.25 0.172 3.2, 5.5 0.53
B6.PWD-Chr15 m 5.05 0.532   8 0.188 0.105 4.3, 5.7 1.33
B6.PWD-Chr16 f 2.96 1.29   8 0.456 0.435 0.9, 4.5 -0.4
B6.PWD-Chr16 m 4.34 2.26   8 0.8 0.522 2.3, 9.1 0.59
B6.PWD-Chr17 f 1.99 0.47   8 0.166 0.237 1.2, 2.7 -1.19
B6.PWD-Chr17 m 2.43 0.337   8 0.119 0.139 1.8, 2.8 -1.4
B6.PWD-Chr18 f 2.58 1.64   5 0.733 0.635 1.6, 5.5 -0.71
B6.PWD-Chr18 m 3.29 1.08   9 0.361 0.33 1.9, 5.4 -0.5
B6.PWD-Chr19 f 0.786 0.581   7 0.22 0.74 -2.17
B6.PWD-Chr19 m 3.94 0.746   8 0.264 0.19 2.9, 5.1 0.17
B6.PWD-Chr2 f 2.3 0.832   9 0.277 0.362 0.9, 3.7 -0.94
B6.PWD-Chr2 m 2.42 1.13   10 0.357 0.466 0.9, 3.5 -1.41
B6.PWD-Chr3 f 2.85 1.4   8 0.495 0.491 1.7, 6.0 -0.49
B6.PWD-Chr3 m 2.89 0.734   8 0.259 0.254 1.8, 4.0 -0.92
B6.PWD-Chr5 f 3.1 0.424   8 0.15 0.137 2.6, 3.9 -0.29
B6.PWD-Chr5 m 2.88 0.345   8 0.122 0.12 2.3, 3.4 -0.93
B6.PWD-Chr6 f 3.84 1.12   10 0.355 0.292 2.4, 5.1 0.31
B6.PWD-Chr6 m 4.73 1.02   8 0.362 0.217 3.6, 6.5 1.0
B6.PWD-Chr9 f 2.34 0.684   8 0.242 0.293 1.3, 3.1 -0.91
B6.PWD-Chr9 m 3.81 1.28   8 0.453 0.336 2.0, 5.7 0.04
B6.PWD-ChrX.1 f 3.39 1.28   8 0.454 0.379 1.7, 5.6 -0.05
B6.PWD-ChrX.1 m 3.65 0.935   8 0.331 0.256 2.2, 5.5 -0.13
B6.PWD-ChrX.2 f 3.83 0.208   3 0.12 0.0543 3.6, 4.0 0.3
B6.PWD-ChrX.2 m 2.74 0.516   7 0.195 0.188 2.0, 3.4 -1.08
B6.PWD-ChrX.3 f 5.56 0.819   9 0.273 0.147 4.2, 6.9 1.71
B6.PWD-ChrX.3 m 3.89 1.8   8 0.636 0.462 2.2, 7.6 0.12
B6.PWD-ChrY f 4.09 0.821   7 0.31 0.201 3.0, 5.2 0.52
B6.PWD-ChrY m 4.31 0.906   8 0.32 0.21 3.3, 6.0 0.56
B6.PWD-mt f 2.1 0.524   8 0.185 0.249 1.6, 3.1 -1.1
B6.PWD-mt m 2.26 0.816   8 0.288 0.361 1.8, 4.2 -1.58
C57BL/6J f 3.28 0.204   6 0.0833 0.0622 3.0, 3.5 -0.14
C57BL/6J m 3.94 0.344   5 0.154 0.0872 3.4, 4.2 0.17
PWD/PhJ f 2.58 0.406   9 0.135 0.157 2.1, 3.1 -0.71
PWD/PhJ m 2.55 0.191   4 0.0957 0.0751 2.3, 2.7 -1.28


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 5.15 0.4336 6.0028 4.2972
B6.PWD-Chr1 m 3.59 0.3879 4.3528 2.8272
B6.PWD-Chr10.1 f 5.5833 0.3541 6.2796 4.887
B6.PWD-Chr10.1 m 5.6833 0.5007 6.6681 4.6986
B6.PWD-Chr10.3 f 5.11 0.3879 5.8728 4.3472
B6.PWD-Chr10.3 m 5.1375 0.4336 5.9903 4.2847
B6.PWD-Chr11.1 f 3.3444 0.4088 4.1485 2.5404
B6.PWD-Chr11.1 m 4.2625 0.4336 5.1153 3.4097
B6.PWD-Chr11.2 f 2.325 0.4336 3.1778 1.4722
B6.PWD-Chr11.2 m 3.325 0.4336 4.1778 2.4722
B6.PWD-Chr11.3 f 3.375 0.4336 4.2278 2.5222
B6.PWD-Chr11.3 m 4.9875 0.4336 5.8403 4.1347
B6.PWD-Chr12 f 3.4125 0.4336 4.2653 2.5597
B6.PWD-Chr12 m 4.05 0.4336 4.9028 3.1972
B6.PWD-Chr13 f 4.525 0.4336 5.3778 3.6722
B6.PWD-Chr13 m 4.9222 0.4088 5.7262 4.1182
B6.PWD-Chr14 f 3.1 0.4336 3.9528 2.2472
B6.PWD-Chr14 m 3.025 0.4336 3.8778 2.1722
B6.PWD-Chr15 f 4.1125 0.4336 4.9653 3.2597
B6.PWD-Chr15 m 5.05 0.4336 5.9028 4.1972
B6.PWD-Chr16 f 2.9625 0.4336 3.8153 2.1097
B6.PWD-Chr16 m 4.3375 0.4336 5.1903 3.4847
B6.PWD-Chr17 f 1.9875 0.4336 2.8403 1.1347
B6.PWD-Chr17 m 2.425 0.4336 3.2778 1.5722
B6.PWD-Chr18 f 2.58 0.5485 3.6587 1.5013
B6.PWD-Chr18 m 3.2889 0.4088 4.0929 2.4849
B6.PWD-Chr19 f 0.7857 0.4636 1.6974 0.0
B6.PWD-Chr19 m 3.9375 0.4336 4.7903 3.0847
B6.PWD-Chr2 f 2.3 0.4088 3.104 1.496
B6.PWD-Chr2 m 2.42 0.3879 3.1828 1.6572
B6.PWD-Chr3 f 2.85 0.4336 3.7028 1.9972
B6.PWD-Chr3 m 2.8875 0.4336 3.7403 2.0347
B6.PWD-Chr5 f 3.1 0.4336 3.9528 2.2472
B6.PWD-Chr5 m 2.875 0.4336 3.7278 2.0222
B6.PWD-Chr6 f 3.84 0.3879 4.6028 3.0772
B6.PWD-Chr6 m 4.725 0.4336 5.5778 3.8722
B6.PWD-Chr9 f 2.3375 0.4336 3.1903 1.4847
B6.PWD-Chr9 m 3.8125 0.4336 4.6653 2.9597
B6.PWD-ChrX.1 f 3.3875 0.4336 4.2403 2.5347
B6.PWD-ChrX.1 m 3.65 0.4336 4.5028 2.7972
B6.PWD-ChrX.2 f 3.8333 0.7081 5.2259 2.4407
B6.PWD-ChrX.2 m 2.7429 0.4636 3.6545 1.8312
B6.PWD-ChrX.3 f 5.5556 0.4088 6.3596 4.7515
B6.PWD-ChrX.3 m 3.8875 0.4336 4.7403 3.0347
B6.PWD-ChrY f 4.0857 0.4636 4.9974 3.174
B6.PWD-ChrY m 4.3125 0.4336 5.1653 3.4597
B6.PWD-mt f 2.1 0.4336 2.9528 1.2472
B6.PWD-mt m 2.2625 0.4336 3.1153 1.4097
C57BL/6J f 3.2833 0.5007 4.2681 2.2986
C57BL/6J m 3.94 0.5485 5.0187 2.8613
PWD/PhJ f 2.5778 0.4088 3.3818 1.7738
PWD/PhJ m 2.55 0.6133 3.756 1.344


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 both 4.37 0.2909 4.9421 3.7979
B6.PWD-Chr10.1 both 5.6333 0.3066 6.2364 5.0303
B6.PWD-Chr10.3 both 5.1238 0.2909 5.6958 4.5517
B6.PWD-Chr11.1 both 3.8035 0.298 4.3895 3.2174
B6.PWD-Chr11.2 both 2.825 0.3066 3.428 2.222
B6.PWD-Chr11.3 both 4.1812 0.3066 4.7843 3.5782
B6.PWD-Chr12 both 3.7312 0.3066 4.3343 3.1282
B6.PWD-Chr13 both 4.7236 0.298 5.3096 4.1376
B6.PWD-Chr14 both 3.0625 0.3066 3.6655 2.4595
B6.PWD-Chr15 both 4.5812 0.3066 5.1843 3.9782
B6.PWD-Chr16 both 3.65 0.3066 4.253 3.047
B6.PWD-Chr17 both 2.2062 0.3066 2.8093 1.6032
B6.PWD-Chr18 both 2.9344 0.3421 3.6071 2.2618
B6.PWD-Chr19 both 2.3616 0.3174 2.9858 1.7374
B6.PWD-Chr2 both 2.36 0.2818 2.9141 1.8059
B6.PWD-Chr3 both 2.8687 0.3066 3.4718 2.2657
B6.PWD-Chr5 both 2.9875 0.3066 3.5905 2.3845
B6.PWD-Chr6 both 4.2825 0.2909 4.8546 3.7104
B6.PWD-Chr9 both 3.075 0.3066 3.678 2.472
B6.PWD-ChrX.1 both 3.5187 0.3066 4.1218 2.9157
B6.PWD-ChrX.2 both 3.2881 0.4232 4.1203 2.4559
B6.PWD-ChrX.3 both 4.7215 0.298 5.3076 4.1355
B6.PWD-ChrY both 4.1991 0.3174 4.8233 3.5749
B6.PWD-mt both 2.1812 0.3066 2.7843 1.5782
C57BL/6J both 3.6117 0.3714 4.342 2.8814
PWD/PhJ both 2.5639 0.3685 3.2886 1.8392




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA