Project measure / variable:   Svenson3   CHCM

ID, description, units MPD:27314   CHCM   RBC corpuscular hemoglobin concentration mean (CHCM)   [g/dL]  
Data set, strains Svenson3   B6.PWD consomic w/par   28 strains     sex: both     age: 7wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Svenson3 - RBC corpuscular hemoglobin concentration mean (CHCM)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means31.8   g/dL 31.2   g/dL
Median of the strain means31.4   g/dL 30.9   g/dL
SD of the strain means± 2.43 ± 2.57
Coefficient of variation (CV)0.0765 0.0823
Min–max range of strain means27.8   –   36.2   g/dL 26.9   –   36.2   g/dL
Mean sample size per strain8.0   mice 7.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 13.6781 13.6781 7.7956 0.0055
strain 27 2319.0697 85.8915 48.9525 < 0.0001
sex:strain 27 108.904 4.0335 2.2988 0.0003
Residuals 382 670.2533 1.7546


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 29.8 0.847   8 0.299 0.0284 28.2, 30.7 -0.81
B6.PWD-Chr1 m 29.5 1.06   10 0.335 0.0358 27.0, 30.4 -0.67
B6.PWD-Chr10.1 f 29.4 0.668   12 0.193 0.0227 27.6, 30.2 -0.98
B6.PWD-Chr10.1 m 27.9 0.802   6 0.327 0.0287 26.9, 29.0 -1.3
B6.PWD-Chr10.2 f 28.2 0.523   7 0.198 0.0185 27.4, 28.9 -1.47
B6.PWD-Chr10.2 m 26.9 0.709   3 0.41 0.0264 26.1, 27.5 -1.69
B6.PWD-Chr10.3 f 29.9 0.399   10 0.126 0.0134 29.0, 30.5 -0.77
B6.PWD-Chr10.3 m 29.2 0.414   8 0.146 0.0142 28.9, 30.1 -0.79
B6.PWD-Chr11.1 f 36.0 0.698   9 0.233 0.0194 35.0, 36.8 1.74
B6.PWD-Chr11.1 m 34.6 0.95   8 0.336 0.0274 32.9, 36.1 1.31
B6.PWD-Chr11.2 f 34.3 1.86   8 0.658 0.0543 29.9, 35.9 1.04
B6.PWD-Chr11.2 m 33.9 1.58   8 0.558 0.0466 30.3, 35.0 1.04
B6.PWD-Chr11.3 f 31.8 1.72   8 0.608 0.054 30.0, 35.5 0.01
B6.PWD-Chr11.3 m 31.8 2.03   8 0.717 0.0638 29.8, 34.7 0.22
B6.PWD-Chr12 f 30.8 0.504   8 0.178 0.0164 30.0, 31.7 -0.4
B6.PWD-Chr12 m 29.2 1.84   8 0.651 0.063 26.9, 30.7 -0.79
B6.PWD-Chr13 f 30.5 0.648   8 0.229 0.0212 30.0, 31.8 -0.53
B6.PWD-Chr13 m 30.4 0.669   9 0.223 0.022 29.9, 31.9 -0.32
B6.PWD-Chr14 f 31.3 0.618   8 0.219 0.0198 30.5, 32.4 -0.2
B6.PWD-Chr14 m 30.9 0.494   8 0.175 0.016 30.3, 31.6 -0.13
B6.PWD-Chr15 f 31.1 0.843   8 0.298 0.0272 29.8, 32.5 -0.28
B6.PWD-Chr15 m 30.5 0.607   8 0.215 0.0199 29.8, 31.3 -0.29
B6.PWD-Chr16 f 31.5 0.688   8 0.243 0.0218 30.7, 32.4 -0.11
B6.PWD-Chr16 m 31.0 0.501   8 0.177 0.0161 30.4, 31.9 -0.09
B6.PWD-Chr17 f 36.2 1.61   8 0.568 0.0444 33.7, 38.5 1.82
B6.PWD-Chr17 m 35.7 1.31   8 0.462 0.0366 34.2, 37.5 1.74
B6.PWD-Chr18 f 32.3 0.918   5 0.41 0.0284 31.5, 33.7 0.21
B6.PWD-Chr18 m 31.5 0.829   9 0.276 0.0263 30.5, 33.2 0.1
B6.PWD-Chr19 f 31.7 0.461   7 0.174 0.0146 31.1, 32.6 -0.03
B6.PWD-Chr19 m 30.4 0.525   8 0.186 0.0173 29.4, 31.1 -0.32
B6.PWD-Chr2 f 35.4 0.604   9 0.201 0.0171 34.1, 36.0 1.49
B6.PWD-Chr2 m 34.8 0.572   10 0.181 0.0164 34.2, 35.8 1.39
B6.PWD-Chr3 f 31.1 0.811   8 0.287 0.0261 30.2, 32.8 -0.28
B6.PWD-Chr3 m 31.0 0.723   8 0.255 0.0233 30.0, 32.2 -0.09
B6.PWD-Chr5 f 34.2 4.25   8 1.5 0.124 29.3, 38.3 1.0
B6.PWD-Chr5 m 36.2 2.37   8 0.837 0.0653 33.3, 38.3 1.93
B6.PWD-Chr6 f 31.6 0.648   10 0.205 0.0205 30.7, 32.8 -0.07
B6.PWD-Chr6 m 31.0 0.722   8 0.255 0.0233 30.1, 32.1 -0.09
B6.PWD-Chr8 f 27.8 1.06   2   0.75 0.0382 27.0, 28.5 -1.64
B6.PWD-Chr8 m 27.7 0.141   2   0.1 0.00511 27.6, 27.8 -1.37
B6.PWD-Chr9 f 33.7 3.03   8 1.07 0.0898 31.1, 38.6 0.79
B6.PWD-Chr9 m 30.8 0.605   8 0.214 0.0197 29.7, 31.7 -0.17
B6.PWD-ChrX.1 f 34.1 2.13   8 0.751 0.0624 30.1, 36.3 0.95
B6.PWD-ChrX.1 m 32.9 1.47   8 0.521 0.0448 31.7, 35.8 0.65
B6.PWD-ChrX.2 f 29.0 1.2   6 0.491 0.0415 27.9, 30.5 -1.14
B6.PWD-ChrX.2 m 30.4 3.08   8 1.09 0.101 26.9, 33.5 -0.32
B6.PWD-ChrX.3 f 33.3 0.326   9 0.109 0.00978 32.6, 33.7 0.63
B6.PWD-ChrX.3 m 35.0 1.45   8 0.514 0.0415 32.5, 36.1 1.46
B6.PWD-ChrY f 31.2 0.277   7 0.105 0.00887 30.7, 31.5 -0.24
B6.PWD-ChrY m 30.5 0.44   8 0.156 0.0144 29.6, 30.8 -0.29
B6.PWD-mt f 35.7 1.92   8 0.678 0.0537 32.3, 38.5 1.61
B6.PWD-mt m 34.3 1.34   8 0.474 0.0391 32.1, 36.8 1.19
C57BL/6J f 28.6 0.731   6 0.298 0.0256 27.8, 29.3 -1.31
C57BL/6J m 27.4 1.07   5 0.477 0.0389 26.3, 29.0 -1.49
PWD/PhJ f 29.3 0.808   12 0.233 0.0276 28.2, 30.4 -1.02
PWD/PhJ m 29.2 0.682   9 0.227 0.0233 28.2, 30.0 -0.79


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 29.8 0.4683 30.7208 28.8792
B6.PWD-Chr1 m 29.52 0.4189 30.3436 28.6964
B6.PWD-Chr10.1 f 29.4417 0.3824 30.1935 28.6898
B6.PWD-Chr10.1 m 27.95 0.5408 29.0133 26.8867
B6.PWD-Chr10.2 f 28.2 0.5007 29.1844 27.2156
B6.PWD-Chr10.2 m 26.8667 0.7648 28.3703 25.363
B6.PWD-Chr10.3 f 29.92 0.4189 30.7436 29.0964
B6.PWD-Chr10.3 m 29.2375 0.4683 30.1583 28.3167
B6.PWD-Chr11.1 f 36.0222 0.4415 36.8904 35.1541
B6.PWD-Chr11.1 m 34.625 0.4683 35.5458 33.7042
B6.PWD-Chr11.2 f 34.2625 0.4683 35.1833 33.3417
B6.PWD-Chr11.2 m 33.8875 0.4683 34.8083 32.9667
B6.PWD-Chr11.3 f 31.8125 0.4683 32.7333 30.8917
B6.PWD-Chr11.3 m 31.7625 0.4683 32.6833 30.8417
B6.PWD-Chr12 f 30.7625 0.4683 31.6833 29.8417
B6.PWD-Chr12 m 29.2125 0.4683 30.1333 28.2917
B6.PWD-Chr13 f 30.5375 0.4683 31.4583 29.6167
B6.PWD-Chr13 m 30.4222 0.4415 31.2904 29.5541
B6.PWD-Chr14 f 31.275 0.4683 32.1958 30.3542
B6.PWD-Chr14 m 30.8875 0.4683 31.8083 29.9667
B6.PWD-Chr15 f 31.05 0.4683 31.9708 30.1292
B6.PWD-Chr15 m 30.5 0.4683 31.4208 29.5792
B6.PWD-Chr16 f 31.4875 0.4683 32.4083 30.5667
B6.PWD-Chr16 m 31.025 0.4683 31.9458 30.1042
B6.PWD-Chr17 f 36.2 0.4683 37.1208 35.2792
B6.PWD-Chr17 m 35.7125 0.4683 36.6333 34.7917
B6.PWD-Chr18 f 32.32 0.5924 33.4847 31.1553
B6.PWD-Chr18 m 31.4778 0.4415 32.3459 30.6096
B6.PWD-Chr19 f 31.6714 0.5007 32.6558 30.687
B6.PWD-Chr19 m 30.3875 0.4683 31.3083 29.4667
B6.PWD-Chr2 f 35.3778 0.4415 36.2459 34.5096
B6.PWD-Chr2 m 34.8 0.4189 35.6236 33.9764
B6.PWD-Chr3 f 31.1125 0.4683 32.0333 30.1917
B6.PWD-Chr3 m 30.975 0.4683 31.8958 30.0542
B6.PWD-Chr5 f 34.2375 0.4683 35.1583 33.3167
B6.PWD-Chr5 m 36.25 0.4683 37.1708 35.3292
B6.PWD-Chr6 f 31.57 0.4189 32.3936 30.7464
B6.PWD-Chr6 m 31.0125 0.4683 31.9333 30.0917
B6.PWD-Chr8 f 27.75 0.9366 29.5916 25.9084
B6.PWD-Chr8 m 27.7 0.9366 29.5416 25.8584
B6.PWD-Chr9 f 33.7125 0.4683 34.6333 32.7917
B6.PWD-Chr9 m 30.7625 0.4683 31.6833 29.8417
B6.PWD-ChrX.1 f 34.075 0.4683 34.9958 33.1542
B6.PWD-ChrX.1 m 32.8625 0.4683 33.7833 31.9417
B6.PWD-ChrX.2 f 29.0 0.5408 30.0633 27.9367
B6.PWD-ChrX.2 m 30.45 0.4683 31.3708 29.5292
B6.PWD-ChrX.3 f 33.3111 0.4415 34.1793 32.443
B6.PWD-ChrX.3 m 35.025 0.4683 35.9458 34.1042
B6.PWD-ChrY f 31.2 0.5007 32.1844 30.2156
B6.PWD-ChrY m 30.525 0.4683 31.4458 29.6042
B6.PWD-mt f 35.7125 0.4683 36.6333 34.7917
B6.PWD-mt m 34.3375 0.4683 35.2583 33.4167
C57BL/6J f 28.5833 0.5408 29.6466 27.5201
C57BL/6J m 27.42 0.5924 28.5847 26.2553
PWD/PhJ f 29.325 0.3824 30.0768 28.5732
PWD/PhJ m 29.2444 0.4415 30.1126 28.3763


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 both 29.66 0.3142 30.2777 29.0423
B6.PWD-Chr10.1 both 28.6958 0.3312 29.3469 28.0447
B6.PWD-Chr10.2 both 27.5333 0.457 28.4319 26.6347
B6.PWD-Chr10.3 both 29.5787 0.3142 30.1964 28.9611
B6.PWD-Chr11.1 both 35.3236 0.3218 35.9564 34.6908
B6.PWD-Chr11.2 both 34.075 0.3312 34.7261 33.4239
B6.PWD-Chr11.3 both 31.7875 0.3312 32.4386 31.1364
B6.PWD-Chr12 both 29.9875 0.3312 30.6386 29.3364
B6.PWD-Chr13 both 30.4799 0.3218 31.1126 29.8471
B6.PWD-Chr14 both 31.0812 0.3312 31.7324 30.4301
B6.PWD-Chr15 both 30.775 0.3312 31.4261 30.1239
B6.PWD-Chr16 both 31.2562 0.3312 31.9074 30.6051
B6.PWD-Chr17 both 35.9562 0.3312 36.6074 35.3051
B6.PWD-Chr18 both 31.8989 0.3694 32.6252 31.1725
B6.PWD-Chr19 both 31.0295 0.3428 31.7034 30.3555
B6.PWD-Chr2 both 35.0889 0.3043 35.6872 34.4906
B6.PWD-Chr3 both 31.0438 0.3312 31.6949 30.3926
B6.PWD-Chr5 both 35.2438 0.3312 35.8949 34.5926
B6.PWD-Chr6 both 31.2912 0.3142 31.9089 30.6736
B6.PWD-Chr8 both 27.725 0.6623 29.0272 26.4228
B6.PWD-Chr9 both 32.2375 0.3312 32.8886 31.5864
B6.PWD-ChrX.1 both 33.4688 0.3312 34.1199 32.8176
B6.PWD-ChrX.2 both 29.725 0.3577 30.4283 29.0217
B6.PWD-ChrX.3 both 34.1681 0.3218 34.8008 33.5353
B6.PWD-ChrY both 30.8625 0.3428 31.5365 30.1885
B6.PWD-mt both 35.025 0.3312 35.6761 34.3739
C57BL/6J both 28.0017 0.401 28.7902 27.2131
PWD/PhJ both 29.2847 0.292 29.8589 28.7105




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA