Project measure / variable:   Svenson3   HCT

ID, description, units MPD:27310   HCT   hematocrit (HCT)   [%]  
Data set, strains Svenson3   B6.PWD consomic w/par   28 strains     sex: both     age: 7wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Svenson3 - hematocrit (HCT)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means46.6   % 46.8   %
Median of the strain means45.1   % 45.6   %
SD of the strain means± 5.06 ± 5.29
Coefficient of variation (CV)0.109 0.113
Min–max range of strain means38.4   –   58.0   % 39.4   –   58.8   %
Mean sample size per strain8.0   mice 7.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 8.5519 8.5519 0.9551 0.3291
strain 27 9039.3215 334.7897 37.3884 < 0.0001
sex:strain 27 405.0842 15.0031 1.6755 0.02
Residuals 382 3420.573 8.9544


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 48.5 2.13   8 0.752 0.0439 46.1, 52.7 0.37
B6.PWD-Chr1 m 49.0 4.39   10 1.39 0.0896 45.9, 58.7 0.41
B6.PWD-Chr10.1 f 54.3 3.18   12 0.917 0.0586 51.2, 63.7 1.52
B6.PWD-Chr10.1 m 51.0 6.98   6 2.85 0.137 37.6, 56.1 0.79
B6.PWD-Chr10.2 f 53.4 2.84   7 1.07 0.0531 49.8, 56.6 1.34
B6.PWD-Chr10.2 m 56.0 1.85   3 1.07 0.033 53.9, 57.2 1.73
B6.PWD-Chr10.3 f 49.3 1.78   10 0.562 0.036 47.2, 53.1 0.53
B6.PWD-Chr10.3 m 51.1 2.5   8 0.883 0.0489 47.7, 54.1 0.81
B6.PWD-Chr11.1 f 40.6 2.52   9 0.841 0.0621 36.0, 43.3 -1.19
B6.PWD-Chr11.1 m 41.4 2.63   8 0.928 0.0635 37.8, 47.0 -1.03
B6.PWD-Chr11.2 f 42.3 4.32   8 1.53 0.102 39.1, 52.4 -0.85
B6.PWD-Chr11.2 m 40.3 2.67   8 0.944 0.0663 38.2, 46.7 -1.23
B6.PWD-Chr11.3 f 41.8 2.06   8 0.729 0.0494 38.3, 44.7 -0.95
B6.PWD-Chr11.3 m 41.3 2.03   8 0.719 0.0492 38.8, 45.0 -1.04
B6.PWD-Chr12 f 46.2 2.42   8 0.857 0.0524 43.6, 49.2 -0.08
B6.PWD-Chr12 m 49.4 5.78   8 2.04 0.117 42.5, 57.1 0.49
B6.PWD-Chr13 f 47.3 1.54   8 0.546 0.0326 44.7, 49.3 0.14
B6.PWD-Chr13 m 47.4 2.39   9 0.798 0.0504 42.9, 50.3 0.11
B6.PWD-Chr14 f 42.6 1.26   8 0.444 0.0295 40.3, 44.5 -0.79
B6.PWD-Chr14 m 43.9 2.34   8 0.826 0.0533 39.7, 46.5 -0.55
B6.PWD-Chr15 f 46.7 3.06   8 1.08 0.0656 42.9, 51.2 0.02
B6.PWD-Chr15 m 48.2 2.05   8 0.726 0.0426 45.1, 51.6 0.26
B6.PWD-Chr16 f 43.5 3.2   8 1.13 0.0737 40.1, 49.9 -0.61
B6.PWD-Chr16 m 44.5 1.3   8 0.461 0.0293 43.2, 46.2 -0.44
B6.PWD-Chr17 f 42.9 1.83   8 0.648 0.0428 39.6, 45.6 -0.73
B6.PWD-Chr17 m 42.4 1.81   8 0.641 0.0428 40.1, 45.0 -0.84
B6.PWD-Chr18 f 45.4 1.76   5 0.785 0.0387 42.8, 46.9 -0.24
B6.PWD-Chr18 m 45.8 2.1   9 0.7 0.0459 41.6, 48.9 -0.19
B6.PWD-Chr19 f 43.8 1.55   7 0.585 0.0353 40.7, 45.3 -0.55
B6.PWD-Chr19 m 44.9 1.78   8 0.631 0.0398 42.3, 48.4 -0.36
B6.PWD-Chr2 f 38.4 1.24   9 0.414 0.0323 36.8, 40.0 -1.62
B6.PWD-Chr2 m 39.4 1.63   10 0.514 0.0413 37.5, 42.4 -1.4
B6.PWD-Chr3 f 46.2 1.74   8 0.617 0.0377 44.7, 49.9 -0.08
B6.PWD-Chr3 m 45.6 1.86   8 0.658 0.0408 42.7, 47.9 -0.23
B6.PWD-Chr5 f 46.7 7.19   8 2.54 0.154 39.4, 56.9 0.02
B6.PWD-Chr5 m 41.5 4.05   8 1.43 0.0976 33.0, 46.6 -1.01
B6.PWD-Chr6 f 44.1 1.64   10 0.519 0.0372 42.2, 47.8 -0.49
B6.PWD-Chr6 m 45.6 1.65   8 0.584 0.0362 43.4, 48.9 -0.23
B6.PWD-Chr8 f 58.0 3.32   2   2.35 0.0573 55.6, 60.3 2.25
B6.PWD-Chr8 m 58.8 0.354   2   0.25 0.00602 58.5, 59.0 2.26
B6.PWD-Chr9 f 44.9 3.16   8 1.12 0.0704 38.6, 47.7 -0.34
B6.PWD-Chr9 m 46.0 2.8   8 0.991 0.0609 39.4, 48.5 -0.16
B6.PWD-ChrX.1 f 44.8 3.9   8 1.38 0.0871 41.4, 53.5 -0.36
B6.PWD-ChrX.1 m 45.6 3.48   8 1.23 0.0763 39.1, 50.2 -0.23
B6.PWD-ChrX.2 f 54.4 5.43   6 2.22 0.0999 48.4, 60.2 1.54
B6.PWD-ChrX.2 m 49.6 7.43   8 2.63 0.15 41.7, 59.0 0.52
B6.PWD-ChrX.3 f 42.4 1.61   9 0.536 0.0379 40.2, 44.9 -0.83
B6.PWD-ChrX.3 m 41.1 1.03   8 0.363 0.0249 39.8, 43.0 -1.08
B6.PWD-ChrY f 44.3 1.44   7 0.543 0.0324 41.8, 46.2 -0.46
B6.PWD-ChrY m 44.1 1.66   8 0.586 0.0376 42.0, 46.4 -0.52
B6.PWD-mt f 42.4 2.8   8 0.992 0.0662 39.2, 47.5 -0.83
B6.PWD-mt m 44.1 1.61   8 0.57 0.0366 40.9, 46.4 -0.52
C57BL/6J f 55.3 2.23   6 0.909 0.0403 53.1, 57.7 1.72
C57BL/6J m 58.0 1.18   5 0.528 0.0203 56.1, 59.1 2.11
PWD/PhJ f 54.4 1.94   12 0.561 0.0357 51.9, 57.9 1.54
PWD/PhJ m 55.1 1.97   9 0.657 0.0358 51.9, 59.1 1.56


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 48.475 1.058 50.5552 46.3948
B6.PWD-Chr1 m 48.97 0.9463 50.8306 47.1094
B6.PWD-Chr10.1 f 54.2667 0.8638 55.9651 52.5682
B6.PWD-Chr10.1 m 50.9833 1.2216 53.3853 48.5814
B6.PWD-Chr10.2 f 53.4286 1.131 55.6524 51.2048
B6.PWD-Chr10.2 m 56.0333 1.7277 59.4302 52.6364
B6.PWD-Chr10.3 f 49.28 0.9463 51.1406 47.4194
B6.PWD-Chr10.3 m 51.1375 1.058 53.2177 49.0573
B6.PWD-Chr11.1 f 40.6444 0.9975 42.6056 38.6832
B6.PWD-Chr11.1 m 41.3625 1.058 43.4427 39.2823
B6.PWD-Chr11.2 f 42.3 1.058 44.3802 40.2198
B6.PWD-Chr11.2 m 40.2875 1.058 42.3677 38.2073
B6.PWD-Chr11.3 f 41.7625 1.058 43.8427 39.6823
B6.PWD-Chr11.3 m 41.2875 1.058 43.3677 39.2073
B6.PWD-Chr12 f 46.225 1.058 48.3052 44.1448
B6.PWD-Chr12 m 49.3625 1.058 51.4427 47.2823
B6.PWD-Chr13 f 47.3125 1.058 49.3927 45.2323
B6.PWD-Chr13 m 47.4444 0.9975 49.4056 45.4832
B6.PWD-Chr14 f 42.55 1.058 44.6302 40.4698
B6.PWD-Chr14 m 43.8625 1.058 45.9427 41.7823
B6.PWD-Chr15 f 46.6625 1.058 48.7427 44.5823
B6.PWD-Chr15 m 48.2 1.058 50.2802 46.1198
B6.PWD-Chr16 f 43.5 1.058 45.5802 41.4198
B6.PWD-Chr16 m 44.5375 1.058 46.6177 42.4573
B6.PWD-Chr17 f 42.8625 1.058 44.9427 40.7823
B6.PWD-Chr17 m 42.3875 1.058 44.4677 40.3073
B6.PWD-Chr18 f 45.4 1.3382 48.0312 42.7688
B6.PWD-Chr18 m 45.7889 0.9975 47.7501 43.8277
B6.PWD-Chr19 f 43.8286 1.131 46.0524 41.6048
B6.PWD-Chr19 m 44.8625 1.058 46.9427 42.7823
B6.PWD-Chr2 f 38.4222 0.9975 40.3834 36.461
B6.PWD-Chr2 m 39.38 0.9463 41.2406 37.5194
B6.PWD-Chr3 f 46.225 1.058 48.3052 44.1448
B6.PWD-Chr3 m 45.65 1.058 47.7302 43.5698
B6.PWD-Chr5 f 46.675 1.058 48.7552 44.5948
B6.PWD-Chr5 m 41.5375 1.058 43.6177 39.4573
B6.PWD-Chr6 f 44.1 0.9463 45.9606 42.2394
B6.PWD-Chr6 m 45.65 1.058 47.7302 43.5698
B6.PWD-Chr8 f 57.95 2.1159 62.1103 53.7897
B6.PWD-Chr8 m 58.75 2.1159 62.9103 54.5897
B6.PWD-Chr9 f 44.8875 1.058 46.9677 42.8073
B6.PWD-Chr9 m 46.05 1.058 48.1302 43.9698
B6.PWD-ChrX.1 f 44.85 1.058 46.9302 42.7698
B6.PWD-ChrX.1 m 45.6125 1.058 47.6927 43.5323
B6.PWD-ChrX.2 f 54.4 1.2216 56.802 51.998
B6.PWD-ChrX.2 m 49.6125 1.058 51.6927 47.5323
B6.PWD-ChrX.3 f 42.4111 0.9975 44.3723 40.4499
B6.PWD-ChrX.3 m 41.1 1.058 43.1802 39.0198
B6.PWD-ChrY f 44.2857 1.131 46.5095 42.0619
B6.PWD-ChrY m 44.075 1.058 46.1552 41.9948
B6.PWD-mt f 42.3875 1.058 44.4677 40.3073
B6.PWD-mt m 44.05 1.058 46.1302 41.9698
C57BL/6J f 55.3333 1.2216 57.7353 52.9314
C57BL/6J m 58.04 1.3382 60.6712 55.4088
PWD/PhJ f 54.3667 0.8638 56.0651 52.6682
PWD/PhJ m 55.1111 0.9975 57.0723 53.1499


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 both 48.7225 0.7097 50.1179 47.3271
B6.PWD-Chr10.1 both 52.625 0.7481 54.0959 51.1541
B6.PWD-Chr10.2 both 54.731 1.0325 56.761 52.7009
B6.PWD-Chr10.3 both 50.2088 0.7097 51.6042 48.8133
B6.PWD-Chr11.1 both 41.0035 0.727 42.4329 39.574
B6.PWD-Chr11.2 both 41.2937 0.7481 42.7647 39.8228
B6.PWD-Chr11.3 both 41.525 0.7481 42.9959 40.0541
B6.PWD-Chr12 both 47.7937 0.7481 49.2647 46.3228
B6.PWD-Chr13 both 47.3785 0.727 48.8079 45.949
B6.PWD-Chr14 both 43.2063 0.7481 44.6772 41.7353
B6.PWD-Chr15 both 47.4313 0.7481 48.9022 45.9603
B6.PWD-Chr16 both 44.0188 0.7481 45.4897 42.5478
B6.PWD-Chr17 both 42.625 0.7481 44.0959 41.1541
B6.PWD-Chr18 both 45.5944 0.8345 47.2353 43.9536
B6.PWD-Chr19 both 44.3455 0.7744 45.8681 42.823
B6.PWD-Chr2 both 38.9011 0.6875 40.2528 37.5494
B6.PWD-Chr3 both 45.9375 0.7481 47.4084 44.4666
B6.PWD-Chr5 both 44.1062 0.7481 45.5772 42.6353
B6.PWD-Chr6 both 44.875 0.7097 46.2704 43.4796
B6.PWD-Chr8 both 58.35 1.4962 61.2918 55.4082
B6.PWD-Chr9 both 45.4688 0.7481 46.9397 43.9978
B6.PWD-ChrX.1 both 45.2312 0.7481 46.7022 43.7603
B6.PWD-ChrX.2 both 52.0062 0.808 53.595 50.4175
B6.PWD-ChrX.3 both 41.7556 0.727 43.185 40.3261
B6.PWD-ChrY both 44.1804 0.7744 45.7029 42.6578
B6.PWD-mt both 43.2187 0.7481 44.6897 41.7478
C57BL/6J both 56.6867 0.906 58.468 54.9053
PWD/PhJ both 54.7389 0.6598 56.0361 53.4417




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA