Phenotype measure:   Svenson3   pctLUC

ID, description, units MPD:27308   pctLUC   large unstained cell differential (LUC; percentage of total WBC)   [%]
Data set, strains Svenson3   B6.PWD consomic w/par   28 strains     sex: both     age: 7wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Svenson3 - large unstained cell differential (LUC; percentage of total WBC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means1.01   % 0.938   %
Median of the strain means0.863   % 0.906   %
SD of the strain means± 0.508 ± 0.381
Coefficient of variation (CV)0.506 0.406
Min–max range of strain means0.275   –   2.83   % 0.189   –   2.02   %
Mean sample size per strain8.0   mice 7.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.5357 0.5357 1.3333 0.2489
strain 27 67.0125 2.4819 6.1771 < 0.0001
sex:strain 27 22.8244 0.8453 2.1039 0.0013
Residuals 380 152.683 0.4018


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 0.875 0.311   8 0.11 0.355 0.6, 1.6 -0.26
B6.PWD-Chr1 m 0.79 0.179   10 0.0567 0.227 0.6, 1.1 -0.39
B6.PWD-Chr10.1 f 1.03 0.786   12 0.227 0.767 0.4, 3.4 0.05
B6.PWD-Chr10.1 m 0.95 0.672   6 0.274 0.707 0.5, 2.3 0.03
B6.PWD-Chr10.2 f 0.586 0.157   7 0.0595 0.269 0.4, 0.8 -0.83
B6.PWD-Chr10.2 m 0.567 0.115   3 0.0667 0.204 0.5, 0.7 -0.97
B6.PWD-Chr10.3 f 2.83 2.86   9 0.952 1.01 0.7, 7.2 3.59
B6.PWD-Chr10.3 m 0.9 0.233   8 0.0824 0.259 0.6, 1.2 -0.1
B6.PWD-Chr11.1 f 0.722 0.273   9 0.0909 0.378 0.4, 1.3 -0.56
B6.PWD-Chr11.1 m 0.8 0.262   8 0.0926 0.327 0.5, 1.2 -0.36
B6.PWD-Chr11.2 f 0.638 0.213   8 0.0754 0.335 0.4, 1.0 -0.72
B6.PWD-Chr11.2 m 0.95 0.463   8 0.164 0.487 0.2, 1.7 0.03
B6.PWD-Chr11.3 f 1.34 0.466   8 0.165 0.348 0.8, 1.9 0.66
B6.PWD-Chr11.3 m 0.975 0.282   8 0.0996 0.289 0.6, 1.5 0.1
B6.PWD-Chr12 f 1.11 0.146   8 0.0515 0.131 0.9, 1.4 0.21
B6.PWD-Chr12 m 0.975 0.26   8 0.0921 0.267 0.7, 1.5 0.1
B6.PWD-Chr13 f 1.26 0.553   8 0.195 0.438 0.6, 2.1 0.5
B6.PWD-Chr13 m 1.13 0.367   9 0.122 0.324 0.7, 1.7 0.5
B6.PWD-Chr14 f 1.25 0.342   8 0.121 0.274 0.7, 1.7 0.48
B6.PWD-Chr14 m 1.35 0.298   8 0.105 0.22 1.0, 1.9 1.08
B6.PWD-Chr15 f 1.3 0.566   8 0.2 0.435 0.4, 2.0 0.58
B6.PWD-Chr15 m 1.47 0.547   8 0.193 0.371 0.7, 2.2 1.4
B6.PWD-Chr16 f 1.62 0.665   8 0.235 0.409 1.0, 3.1 1.21
B6.PWD-Chr16 m 1.34 0.507   8 0.179 0.379 0.8, 2.4 1.06
B6.PWD-Chr17 f 0.85 0.298   8 0.105 0.35 0.5, 1.4 -0.31
B6.PWD-Chr17 m 0.912 0.436   8 0.154 0.477 0.5, 1.8 -0.07
B6.PWD-Chr18 f 0.82 0.327   5 0.146 0.399 0.4, 1.3 -0.37
B6.PWD-Chr18 m 0.878 0.156   9 0.0521 0.178 0.7, 1.2 -0.16
B6.PWD-Chr19 f 0.6 0.173   7 0.0655 0.289 0.3, 0.8 -0.8
B6.PWD-Chr19 m 1.06 0.267   8 0.0944 0.251 0.8, 1.4 0.32
B6.PWD-Chr2 f 0.622 0.148   9 0.0494 0.238 0.4, 0.9 -0.75
B6.PWD-Chr2 m 0.711 0.252   9 0.0841 0.355 0.4, 1.2 -0.6
B6.PWD-Chr3 f 0.813 0.309   8 0.109 0.38 0.5, 1.5 -0.38
B6.PWD-Chr3 m 0.787 0.181   8 0.0639 0.23 0.6, 1.0 -0.4
B6.PWD-Chr5 f 1.4 1.59   8 0.563 1.14 0.5, 5.3 0.78
B6.PWD-Chr5 m 0.85 0.657   8 0.232 0.773 0.4, 2.0 -0.23
B6.PWD-Chr6 f 1.59 1.03   10 0.325 0.647 0.8, 4.3 1.15
B6.PWD-Chr6 m 1.11 0.589   8 0.208 0.529 0.6, 2.3 0.45
B6.PWD-Chr8 f 0.5 0.141   2   0.1 0.283 0.4, 0.6 -0.99
B6.PWD-Chr8 m 0.4 0.0   2   0.0 0.0 0.4, 0.4 -1.41
B6.PWD-Chr9 f 1.31 0.259   8 0.0915 0.197 1.0, 1.7 0.6
B6.PWD-Chr9 m 2.02 1.2   8 0.426 0.595 0.7, 4.3 2.84
B6.PWD-ChrX.1 f 0.687 0.538   8 0.19 0.783 0.3, 2.0 -0.63
B6.PWD-ChrX.1 m 0.537 0.169   8 0.0596 0.313 0.3, 0.9 -1.05
B6.PWD-ChrX.2 f 0.65 0.176   6 0.0719 0.271 0.5, 0.9 -0.7
B6.PWD-ChrX.2 m 0.55 0.256   8 0.0906 0.466 0.2, 0.9 -1.02
B6.PWD-ChrX.3 f 0.4 0.0707   9 0.0236 0.177 0.3, 0.5 -1.19
B6.PWD-ChrX.3 m 0.563 0.233   8 0.0822 0.414 0.2, 0.9 -0.98
B6.PWD-ChrY f 1.33 0.256   7 0.0969 0.193 1.0, 1.6 0.64
B6.PWD-ChrY m 1.59 0.416   8 0.147 0.262 1.1, 2.2 1.71
B6.PWD-mt f 0.95 0.573   8 0.203 0.603 0.5, 2.3 -0.11
B6.PWD-mt m 0.787 0.422   8 0.149 0.536 0.3, 1.7 -0.4
C57BL/6J f 0.8 0.303   6 0.124 0.379 0.6, 1.4 -0.4
C57BL/6J m 1.12 0.13   5 0.0583 0.116 1.0, 1.3 0.48
PWD/PhJ f 0.275 0.122   12 0.0351 0.442 0.1, 0.5 -1.44
PWD/PhJ m 0.189 0.105   9 0.0351 0.558 0.1, 0.4 -1.97


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 0.875 0.2241 1.3156 0.4344
B6.PWD-Chr1 m 0.79 0.2004 1.1841 0.3959
B6.PWD-Chr10.1 f 1.025 0.183 1.3848 0.6652
B6.PWD-Chr10.1 m 0.95 0.2588 1.4588 0.4412
B6.PWD-Chr10.2 f 0.5857 0.2396 1.0568 0.1146
B6.PWD-Chr10.2 m 0.5667 0.366 1.2862 0.0
B6.PWD-Chr10.3 f 2.8333 0.2113 3.2488 2.4179
B6.PWD-Chr10.3 m 0.9 0.2241 1.3406 0.4594
B6.PWD-Chr11.1 f 0.7222 0.2113 1.1377 0.3068
B6.PWD-Chr11.1 m 0.8 0.2241 1.2406 0.3594
B6.PWD-Chr11.2 f 0.6375 0.2241 1.0781 0.1969
B6.PWD-Chr11.2 m 0.95 0.2241 1.3906 0.5094
B6.PWD-Chr11.3 f 1.3375 0.2241 1.7781 0.8969
B6.PWD-Chr11.3 m 0.975 0.2241 1.4156 0.5344
B6.PWD-Chr12 f 1.1125 0.2241 1.5531 0.6719
B6.PWD-Chr12 m 0.975 0.2241 1.4156 0.5344
B6.PWD-Chr13 f 1.2625 0.2241 1.7031 0.8219
B6.PWD-Chr13 m 1.1333 0.2113 1.5488 0.7179
B6.PWD-Chr14 f 1.25 0.2241 1.6906 0.8094
B6.PWD-Chr14 m 1.35 0.2241 1.7906 0.9094
B6.PWD-Chr15 f 1.3 0.2241 1.7406 0.8594
B6.PWD-Chr15 m 1.475 0.2241 1.9156 1.0344
B6.PWD-Chr16 f 1.625 0.2241 2.0656 1.1844
B6.PWD-Chr16 m 1.3375 0.2241 1.7781 0.8969
B6.PWD-Chr17 f 0.85 0.2241 1.2906 0.4094
B6.PWD-Chr17 m 0.9125 0.2241 1.3531 0.4719
B6.PWD-Chr18 f 0.82 0.2835 1.3774 0.2626
B6.PWD-Chr18 m 0.8778 0.2113 1.2932 0.4623
B6.PWD-Chr19 f 0.6 0.2396 1.0711 0.1289
B6.PWD-Chr19 m 1.0625 0.2241 1.5031 0.6219
B6.PWD-Chr2 f 0.6222 0.2113 1.0377 0.2068
B6.PWD-Chr2 m 0.7111 0.2113 1.1266 0.2957
B6.PWD-Chr3 f 0.8125 0.2241 1.2531 0.3719
B6.PWD-Chr3 m 0.7875 0.2241 1.2281 0.3469
B6.PWD-Chr5 f 1.4 0.2241 1.8406 0.9594
B6.PWD-Chr5 m 0.85 0.2241 1.2906 0.4094
B6.PWD-Chr6 f 1.59 0.2004 1.9841 1.1959
B6.PWD-Chr6 m 1.1125 0.2241 1.5531 0.6719
B6.PWD-Chr8 f 0.5 0.4482 1.3813 0.0
B6.PWD-Chr8 m 0.4 0.4482 1.2813 0.0
B6.PWD-Chr9 f 1.3125 0.2241 1.7531 0.8719
B6.PWD-Chr9 m 2.025 0.2241 2.4656 1.5844
B6.PWD-ChrX.1 f 0.6875 0.2241 1.1281 0.2469
B6.PWD-ChrX.1 m 0.5375 0.2241 0.9781 0.0969
B6.PWD-ChrX.2 f 0.65 0.2588 1.1588 0.1412
B6.PWD-ChrX.2 m 0.55 0.2241 0.9906 0.1094
B6.PWD-ChrX.3 f 0.4 0.2113 0.8154 0.0
B6.PWD-ChrX.3 m 0.5625 0.2241 1.0031 0.1219
B6.PWD-ChrY f 1.3286 0.2396 1.7996 0.8575
B6.PWD-ChrY m 1.5875 0.2241 2.0281 1.1469
B6.PWD-mt f 0.95 0.2241 1.3906 0.5094
B6.PWD-mt m 0.7875 0.2241 1.2281 0.3469
C57BL/6J f 0.8 0.2588 1.3088 0.2912
C57BL/6J m 1.12 0.2835 1.6774 0.5626
PWD/PhJ f 0.275 0.183 0.6348 0.0
PWD/PhJ m 0.1889 0.2113 0.6043 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 both 0.8325 0.1503 1.1281 0.5369
B6.PWD-Chr10.1 both 0.9875 0.1585 1.2991 0.6759
B6.PWD-Chr10.2 both 0.5762 0.2187 1.0062 0.1462
B6.PWD-Chr10.3 both 1.8667 0.154 2.1695 1.5639
B6.PWD-Chr11.1 both 0.7611 0.154 1.0639 0.4583
B6.PWD-Chr11.2 both 0.7938 0.1585 1.1053 0.4822
B6.PWD-Chr11.3 both 1.1563 0.1585 1.4678 0.8447
B6.PWD-Chr12 both 1.0438 0.1585 1.3553 0.7322
B6.PWD-Chr13 both 1.1979 0.154 1.5007 0.8951
B6.PWD-Chr14 both 1.3 0.1585 1.6116 0.9884
B6.PWD-Chr15 both 1.3875 0.1585 1.6991 1.0759
B6.PWD-Chr16 both 1.4812 0.1585 1.7928 1.1697
B6.PWD-Chr17 both 0.8812 0.1585 1.1928 0.5697
B6.PWD-Chr18 both 0.8489 0.1768 1.1965 0.5013
B6.PWD-Chr19 both 0.8313 0.164 1.1538 0.5087
B6.PWD-Chr2 both 0.6667 0.1494 0.9604 0.3729
B6.PWD-Chr3 both 0.8 0.1585 1.1116 0.4884
B6.PWD-Chr5 both 1.125 0.1585 1.4366 0.8134
B6.PWD-Chr6 both 1.3512 0.1503 1.6468 1.0557
B6.PWD-Chr8 both 0.45 0.3169 1.0732 0.0
B6.PWD-Chr9 both 1.6688 0.1585 1.9803 1.3572
B6.PWD-ChrX.1 both 0.6125 0.1585 0.9241 0.3009
B6.PWD-ChrX.2 both 0.6 0.1712 0.9366 0.2634
B6.PWD-ChrX.3 both 0.4813 0.154 0.7841 0.1784
B6.PWD-ChrY both 1.458 0.164 1.7806 1.1355
B6.PWD-mt both 0.8688 0.1585 1.1803 0.5572
C57BL/6J both 0.96 0.1919 1.3373 0.5827
PWD/PhJ both 0.2319 0.1398 0.5067 0.0




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA