Phenotype measure:   Svenson3   pctLYM

ID, description, units MPD:27304   pctLYM   lymphocyte differential (LYM; percentage of total WBC)   [%]
Data set, strains Svenson3   B6.PWD consomic w/par   28 strains     sex: both     age: 7wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Svenson3 - lymphocyte differential (LYM; percentage of total WBC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means86.8   % 84.1   %
Median of the strain means87.5   % 86.5   %
SD of the strain means± 3.35 ± 6.77
Coefficient of variation (CV)0.0386 0.0806
Min–max range of strain means75.7   –   90.4   % 65.5   –   91.1   %
Mean sample size per strain8.0   mice 7.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 758.5357 758.5357 37.6347 < 0.0001
strain 27 8088.9214 299.5897 14.8641 < 0.0001
sex:strain 27 4180.5748 154.8361 7.6822 < 0.0001
Residuals 380 7658.9795 20.1552


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 83.6 2.65   8 0.937 0.0317 79.4, 87.5 -0.97
B6.PWD-Chr1 m 87.3 3.41   10 1.08 0.039 79.8, 90.6 0.48
B6.PWD-Chr10.1 f 89.0 2.87   12 0.828 0.0322 81.3, 91.9 0.64
B6.PWD-Chr10.1 m 65.5 9.0   6 3.67 0.137 54.2, 79.8 -2.74
B6.PWD-Chr10.2 f 85.6 2.49   7 0.942 0.0291 82.0, 88.2 -0.37
B6.PWD-Chr10.2 m 87.3 4.25   3 2.45 0.0486 82.6, 90.9 0.48
B6.PWD-Chr10.3 f 78.9 8.4   9 2.8 0.106 62.1, 86.8 -2.37
B6.PWD-Chr10.3 m 84.8 2.96   8 1.05 0.0349 80.2, 89.0 0.11
B6.PWD-Chr11.1 f 86.2 3.61   9 1.2 0.0419 77.6, 89.3 -0.19
B6.PWD-Chr11.1 m 81.9 6.58   8 2.33 0.0803 67.8, 86.2 -0.32
B6.PWD-Chr11.2 f 89.2 2.19   8 0.774 0.0245 85.2, 91.6 0.7
B6.PWD-Chr11.2 m 72.8 12.4   8 4.39 0.17 57.8, 89.6 -1.66
B6.PWD-Chr11.3 f 86.5 3.92   8 1.38 0.0453 78.2, 90.7 -0.1
B6.PWD-Chr11.3 m 87.5 1.65   8 0.584 0.0189 85.2, 89.5 0.51
B6.PWD-Chr12 f 86.8 2.19   8 0.773 0.0252 82.4, 89.7 -0.01
B6.PWD-Chr12 m 85.8 2.84   8 1.0 0.0331 82.4, 90.5 0.26
B6.PWD-Chr13 f 87.4 4.06   8 1.43 0.0464 81.3, 92.6 0.17
B6.PWD-Chr13 m 85.9 5.36   9 1.79 0.0624 76.9, 91.1 0.27
B6.PWD-Chr14 f 87.6 2.16   8 0.765 0.0247 84.5, 90.0 0.22
B6.PWD-Chr14 m 87.5 1.96   8 0.692 0.0224 83.2, 89.6 0.51
B6.PWD-Chr15 f 86.4 2.77   8 0.978 0.032 81.1, 88.9 -0.13
B6.PWD-Chr15 m 85.3 2.27   8 0.803 0.0266 82.5, 88.9 0.18
B6.PWD-Chr16 f 88.6 1.78   8 0.629 0.0201 85.7, 90.7 0.52
B6.PWD-Chr16 m 89.3 1.55   8 0.547 0.0173 87.5, 91.6 0.77
B6.PWD-Chr17 f 90.4 1.95   8 0.689 0.0215 87.5, 93.0 1.06
B6.PWD-Chr17 m 89.2 1.85   8 0.653 0.0207 86.3, 91.8 0.76
B6.PWD-Chr18 f 89.0 3.01   5 1.34 0.0338 84.5, 91.9 0.64
B6.PWD-Chr18 m 91.1 1.37   9 0.456 0.015 88.1, 92.9 1.04
B6.PWD-Chr19 f 89.0 1.6   7 0.605 0.018 87.3, 92.1 0.64
B6.PWD-Chr19 m 89.4 1.42   8 0.502 0.0159 87.1, 91.1 0.79
B6.PWD-Chr2 f 85.0 2.95   9 0.985 0.0348 80.8, 88.9 -0.55
B6.PWD-Chr2 m 75.7 10.3   9 3.43 0.136 54.3, 82.2 -1.23
B6.PWD-Chr3 f 87.3 1.08   8 0.383 0.0124 86.2, 89.1 0.14
B6.PWD-Chr3 m 88.1 1.13   8 0.4 0.0129 86.3, 89.9 0.6
B6.PWD-Chr5 f 84.8 3.29   8 1.16 0.0388 77.8, 88.5 -0.61
B6.PWD-Chr5 m 87.1 2.06   8 0.727 0.0236 83.0, 89.0 0.45
B6.PWD-Chr6 f 84.4 2.84   10 0.897 0.0336 80.0, 88.4 -0.73
B6.PWD-Chr6 m 83.5 2.2   8 0.779 0.0264 80.3, 87.3 -0.08
B6.PWD-Chr8 f 87.7 1.63   2   1.15 0.0186 86.5, 88.8 0.25
B6.PWD-Chr8 m 90.2 1.77   2   1.25 0.0196 89.0, 91.5 0.91
B6.PWD-Chr9 f 85.2 3.99   8 1.41 0.0468 77.4, 89.0 -0.49
B6.PWD-Chr9 m 80.1 9.92   8 3.51 0.124 60.5, 89.3 -0.58
B6.PWD-ChrX.1 f 90.2 2.68   8 0.949 0.0298 83.8, 92.5 1.0
B6.PWD-ChrX.1 m 88.5 3.3   8 1.17 0.0373 83.5, 92.5 0.66
B6.PWD-ChrX.2 f 87.5 1.1   6 0.45 0.0126 85.9, 88.5 0.19
B6.PWD-ChrX.2 m 79.2 9.56   8 3.38 0.121 66.2, 88.1 -0.72
B6.PWD-ChrX.3 f 89.9 2.57   9 0.858 0.0286 85.5, 92.8 0.91
B6.PWD-ChrX.3 m 82.9 5.43   8 1.92 0.0654 75.4, 88.6 -0.17
B6.PWD-ChrY f 89.4 2.39   7 0.903 0.0267 86.1, 92.6 0.76
B6.PWD-ChrY m 84.4 8.03   8 2.84 0.0952 69.4, 91.7 0.05
B6.PWD-mt f 90.0 1.67   8 0.59 0.0185 87.9, 92.3 0.94
B6.PWD-mt m 89.3 2.65   8 0.936 0.0297 86.3, 93.5 0.77
C57BL/6J f 90.4 0.994   6 0.406 0.011 89.4, 92.3 1.06
C57BL/6J m 88.4 1.54   5 0.69 0.0175 87.0, 91.0 0.64
PWD/PhJ f 75.7 5.02   12 1.45 0.0663 64.2, 83.7 -3.32
PWD/PhJ m 65.7 3.17   9 1.06 0.0482 59.7, 71.0 -2.71


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 83.6375 1.5873 86.7584 80.5166
B6.PWD-Chr1 m 87.33 1.4197 90.1214 84.5386
B6.PWD-Chr10.1 f 88.9833 1.296 91.5316 86.4351
B6.PWD-Chr10.1 m 65.55 1.8328 69.1537 61.9463
B6.PWD-Chr10.2 f 85.5571 1.6969 88.8935 82.2207
B6.PWD-Chr10.2 m 87.2667 2.592 92.3631 82.1702
B6.PWD-Chr10.3 f 78.9444 1.4965 81.8869 76.002
B6.PWD-Chr10.3 m 84.8 1.5873 87.9209 81.6791
B6.PWD-Chr11.1 f 86.2 1.4965 89.1424 83.2576
B6.PWD-Chr11.1 m 81.9375 1.5873 85.0584 78.8166
B6.PWD-Chr11.2 f 89.2125 1.5873 92.3334 86.0916
B6.PWD-Chr11.2 m 72.825 1.5873 75.9459 69.7041
B6.PWD-Chr11.3 f 86.475 1.5873 89.5959 83.3541
B6.PWD-Chr11.3 m 87.4875 1.5873 90.6084 84.3666
B6.PWD-Chr12 f 86.7625 1.5873 89.8834 83.6416
B6.PWD-Chr12 m 85.8 1.5873 88.9209 82.6791
B6.PWD-Chr13 f 87.4375 1.5873 90.5584 84.3166
B6.PWD-Chr13 m 85.9444 1.4965 88.8869 83.002
B6.PWD-Chr14 f 87.5625 1.5873 90.6834 84.4416
B6.PWD-Chr14 m 87.5375 1.5873 90.6584 84.4166
B6.PWD-Chr15 f 86.4125 1.5873 89.5334 83.2916
B6.PWD-Chr15 m 85.3125 1.5873 88.4334 82.1916
B6.PWD-Chr16 f 88.6125 1.5873 91.7334 85.4916
B6.PWD-Chr16 m 89.3375 1.5873 92.4584 86.2166
B6.PWD-Chr17 f 90.3875 1.5873 93.5084 87.2666
B6.PWD-Chr17 m 89.175 1.5873 92.2959 86.0541
B6.PWD-Chr18 f 89.02 2.0077 92.9677 85.0723
B6.PWD-Chr18 m 91.1 1.4965 94.0424 88.1576
B6.PWD-Chr19 f 89.0 1.6969 92.3364 85.6636
B6.PWD-Chr19 m 89.3625 1.5873 92.4834 86.2416
B6.PWD-Chr2 f 84.9778 1.4965 87.9202 82.0353
B6.PWD-Chr2 m 75.6778 1.4965 78.6202 72.7353
B6.PWD-Chr3 f 87.2625 1.5873 90.3834 84.1416
B6.PWD-Chr3 m 88.1 1.5873 91.2209 84.9791
B6.PWD-Chr5 f 84.8125 1.5873 87.9334 81.6916
B6.PWD-Chr5 m 87.075 1.5873 90.1959 83.9541
B6.PWD-Chr6 f 84.36 1.4197 87.1514 81.5686
B6.PWD-Chr6 m 83.4875 1.5873 86.6084 80.3666
B6.PWD-Chr8 f 87.65 3.1745 93.8918 81.4082
B6.PWD-Chr8 m 90.25 3.1745 96.4918 84.0082
B6.PWD-Chr9 f 85.225 1.5873 88.3459 82.1041
B6.PWD-Chr9 m 80.125 1.5873 83.2459 77.0041
B6.PWD-ChrX.1 f 90.1625 1.5873 93.2834 87.0416
B6.PWD-ChrX.1 m 88.5375 1.5873 91.6584 85.4166
B6.PWD-ChrX.2 f 87.4667 1.8328 91.0704 83.8629
B6.PWD-ChrX.2 m 79.225 1.5873 82.3459 76.1041
B6.PWD-ChrX.3 f 89.9111 1.4965 92.8535 86.9687
B6.PWD-ChrX.3 m 82.9125 1.5873 86.0334 79.7916
B6.PWD-ChrY f 89.3857 1.6969 92.7221 86.0493
B6.PWD-ChrY m 84.425 1.5873 87.5459 81.3041
B6.PWD-mt f 90.05 1.5873 93.1709 86.9291
B6.PWD-mt m 89.275 1.5873 92.3959 86.1541
C57BL/6J f 90.4 1.8328 94.0037 86.7963
C57BL/6J m 88.42 2.0077 92.3677 84.4723
PWD/PhJ f 75.7333 1.296 78.2816 73.1851
PWD/PhJ m 65.7333 1.4965 68.6758 62.7909


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 both 85.4838 1.0648 87.5773 83.3902
B6.PWD-Chr10.1 both 77.2667 1.1224 79.4735 75.0598
B6.PWD-Chr10.2 both 86.4119 1.549 89.4576 83.3662
B6.PWD-Chr10.3 both 81.8722 1.0907 84.0169 79.7276
B6.PWD-Chr11.1 both 84.0688 1.0907 86.2134 81.9241
B6.PWD-Chr11.2 both 81.0188 1.1224 83.2256 78.8119
B6.PWD-Chr11.3 both 86.9813 1.1224 89.1881 84.7744
B6.PWD-Chr12 both 86.2813 1.1224 88.4881 84.0744
B6.PWD-Chr13 both 86.691 1.0907 88.8356 84.5463
B6.PWD-Chr14 both 87.55 1.1224 89.7568 85.3432
B6.PWD-Chr15 both 85.8625 1.1224 88.0693 83.6557
B6.PWD-Chr16 both 88.975 1.1224 91.1818 86.7682
B6.PWD-Chr17 both 89.7812 1.1224 91.9881 87.5744
B6.PWD-Chr18 both 90.06 1.252 92.5218 87.5982
B6.PWD-Chr19 both 89.1813 1.1618 91.4655 86.897
B6.PWD-Chr2 both 80.3278 1.0582 82.4084 78.2472
B6.PWD-Chr3 both 87.6812 1.1224 89.8881 85.4744
B6.PWD-Chr5 both 85.9438 1.1224 88.1506 83.7369
B6.PWD-Chr6 both 83.9238 1.0648 86.0173 81.8302
B6.PWD-Chr8 both 88.95 2.2447 93.3636 84.5364
B6.PWD-Chr9 both 82.675 1.1224 84.8818 80.4682
B6.PWD-ChrX.1 both 89.35 1.1224 91.5568 87.1432
B6.PWD-ChrX.2 both 83.3458 1.2123 85.7295 80.9622
B6.PWD-ChrX.3 both 86.4118 1.0907 88.5565 84.2672
B6.PWD-ChrY both 86.9054 1.1618 89.1896 84.6211
B6.PWD-mt both 89.6625 1.1224 91.8693 87.4557
C57BL/6J both 89.41 1.3593 92.0826 86.7374
PWD/PhJ both 70.7333 0.9898 72.6796 68.7871




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA